Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Gm25239-201ENSMUST00000174915 86 ntBASIC28,15■■■□□ 2,1
Tgfbr1Q64729 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
Tgfbr1Q64729 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,84■■□□□ 1,89
Tgfbr1Q64729 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,77■■□□□ 1,88
Tgfbr1Q64729 Psd-208ENSMUST00000224556 2034 ntBASIC25,96■■□□□ 1,75
Tgfbr1Q64729 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Tgfbr1Q64729 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,74■■□□□ 1,71
Tgfbr1Q64729 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Tgfbr1Q64729 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Tgfbr1Q64729 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,64
Tgfbr1Q64729 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,29■■□□□ 1,64
Tgfbr1Q64729 Gm15042-201ENSMUST00000120212 883 ntBASIC25,23■■□□□ 1,63
Tgfbr1Q64729 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Tgfbr1Q64729 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,85■■□□□ 1,57
Tgfbr1Q64729 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24,83■■□□□ 1,57
Tgfbr1Q64729 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,82■■□□□ 1,56
Tgfbr1Q64729 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Tgfbr1Q64729 Gm15045-201ENSMUST00000117359 883 ntBASIC24,78■■□□□ 1,56
Tgfbr1Q64729 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,49■■□□□ 1,51
Tgfbr1Q64729 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Tgfbr1Q64729 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,32■■□□□ 1,48
Tgfbr1Q64729 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,26■■□□□ 1,47
Tgfbr1Q64729 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Tgfbr1Q64729 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24,21■■□□□ 1,47
Tgfbr1Q64729 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Tgfbr1Q64729 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,17■■□□□ 1,46
Tgfbr1Q64729 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Tgfbr1Q64729 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,15■■□□□ 1,46
Tgfbr1Q64729 Gm24109-201ENSMUST00000175489 103 ntBASIC24,1■■□□□ 1,45
Tgfbr1Q64729 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,06■■□□□ 1,44
Tgfbr1Q64729 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,05■■□□□ 1,44
Tgfbr1Q64729 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,98■■□□□ 1,43
Tgfbr1Q64729 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,97■■□□□ 1,43
Tgfbr1Q64729 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,93■■□□□ 1,42
Tgfbr1Q64729 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,83■■□□□ 1,4
Tgfbr1Q64729 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23,81■■□□□ 1,4
Tgfbr1Q64729 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,79■■□□□ 1,4
Tgfbr1Q64729 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,73■■□□□ 1,39
Tgfbr1Q64729 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,68■■□□□ 1,38
Tgfbr1Q64729 Gm23366-201ENSMUST00000175022 89 ntBASIC23,58■■□□□ 1,37
Tgfbr1Q64729 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,54■■□□□ 1,36
Tgfbr1Q64729 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,53■■□□□ 1,36
Tgfbr1Q64729 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,52■■□□□ 1,36
Tgfbr1Q64729 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,47■■□□□ 1,35
Tgfbr1Q64729 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,47■■□□□ 1,35
Tgfbr1Q64729 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,44■■□□□ 1,34
Tgfbr1Q64729 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,43■■□□□ 1,34
Tgfbr1Q64729 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,4■■□□□ 1,34
Tgfbr1Q64729 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,39■■□□□ 1,33
Tgfbr1Q64729 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,37■■□□□ 1,33
Tgfbr1Q64729 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,35■■□□□ 1,33
Tgfbr1Q64729 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,22■■□□□ 1,31
Tgfbr1Q64729 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,22■■□□□ 1,31
Tgfbr1Q64729 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,2■■□□□ 1,3
Tgfbr1Q64729 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,13■■□□□ 1,29
Tgfbr1Q64729 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Tgfbr1Q64729 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,1■■□□□ 1,29
Tgfbr1Q64729 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,05■■□□□ 1,28
Tgfbr1Q64729 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,04■■□□□ 1,28
Tgfbr1Q64729 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23,02■■□□□ 1,28
Tgfbr1Q64729 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,01■■□□□ 1,27
Tgfbr1Q64729 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Tgfbr1Q64729 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,95■■□□□ 1,26
Tgfbr1Q64729 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,95■■□□□ 1,26
Tgfbr1Q64729 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,9■■□□□ 1,26
Tgfbr1Q64729 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,26
Tgfbr1Q64729 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,89■■□□□ 1,25
Tgfbr1Q64729 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22,84■■□□□ 1,25
Tgfbr1Q64729 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,84■■□□□ 1,25
Tgfbr1Q64729 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22,79■■□□□ 1,24
Tgfbr1Q64729 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Tgfbr1Q64729 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,71■■□□□ 1,23
Tgfbr1Q64729 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Tgfbr1Q64729 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22,64■■□□□ 1,22
Tgfbr1Q64729 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Tgfbr1Q64729 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Tgfbr1Q64729 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,58■■□□□ 1,21
Tgfbr1Q64729 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Tgfbr1Q64729 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Tgfbr1Q64729 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,48■■□□□ 1,19
Tgfbr1Q64729 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,18
Tgfbr1Q64729 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,37■■□□□ 1,17
Tgfbr1Q64729 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,34■■□□□ 1,17
Tgfbr1Q64729 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,32■■□□□ 1,16
Tgfbr1Q64729 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22,29■■□□□ 1,16
Tgfbr1Q64729 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,29■■□□□ 1,16
Tgfbr1Q64729 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,29■■□□□ 1,16
Tgfbr1Q64729 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,28■■□□□ 1,16
Tgfbr1Q64729 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,26■■□□□ 1,15
Tgfbr1Q64729 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,26■■□□□ 1,15
Tgfbr1Q64729 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,24■■□□□ 1,15
Tgfbr1Q64729 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
Tgfbr1Q64729 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,22■■□□□ 1,15
Tgfbr1Q64729 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22,21■■□□□ 1,15
Tgfbr1Q64729 Gm27325-201ENSMUST00000175467 74 ntBASIC22,2■■□□□ 1,14
Tgfbr1Q64729 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Tgfbr1Q64729 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22,17■■□□□ 1,14
Tgfbr1Q64729 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22,16■■□□□ 1,14
Tgfbr1Q64729 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Tgfbr1Q64729 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,13■■□□□ 1,13
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms