Protein–RNA interactions for Protein: Q8VCH0

Acaa1b, 3-ketoacyl-CoA thiolase B, peroxisomal, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Acaa1bQ8VCH0 Gm25239-201ENSMUST00000174915 86 ntBASIC31.46■■■□□ 2.63
Acaa1bQ8VCH0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Acaa1bQ8VCH0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Acaa1bQ8VCH0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Acaa1bQ8VCH0 Gm15042-201ENSMUST00000120212 883 ntBASIC27.79■■■□□ 2.04
Acaa1bQ8VCH0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Acaa1bQ8VCH0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Acaa1bQ8VCH0 Gm15045-201ENSMUST00000117359 883 ntBASIC27.2■■□□□ 1.94
Acaa1bQ8VCH0 Gm24109-201ENSMUST00000175489 103 ntBASIC27.12■■□□□ 1.93
Acaa1bQ8VCH0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Acaa1bQ8VCH0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Acaa1bQ8VCH0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Acaa1bQ8VCH0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Acaa1bQ8VCH0 Gm23366-201ENSMUST00000175022 89 ntBASIC26.37■■□□□ 1.81
Acaa1bQ8VCH0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Acaa1bQ8VCH0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.28■■□□□ 1.8
Acaa1bQ8VCH0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Acaa1bQ8VCH0 Psd-208ENSMUST00000224556 2034 ntBASIC26.17■■□□□ 1.78
Acaa1bQ8VCH0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Acaa1bQ8VCH0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Acaa1bQ8VCH0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Acaa1bQ8VCH0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Acaa1bQ8VCH0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Acaa1bQ8VCH0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Acaa1bQ8VCH0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Acaa1bQ8VCH0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.7■■□□□ 1.7
Acaa1bQ8VCH0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Acaa1bQ8VCH0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Acaa1bQ8VCH0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Acaa1bQ8VCH0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Acaa1bQ8VCH0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Acaa1bQ8VCH0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.49■■□□□ 1.67
Acaa1bQ8VCH0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Acaa1bQ8VCH0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.34■■□□□ 1.65
Acaa1bQ8VCH0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Acaa1bQ8VCH0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Acaa1bQ8VCH0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.03■■□□□ 1.6
Acaa1bQ8VCH0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.93■■□□□ 1.58
Acaa1bQ8VCH0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Acaa1bQ8VCH0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
Acaa1bQ8VCH0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Acaa1bQ8VCH0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Acaa1bQ8VCH0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.76■■□□□ 1.55
Acaa1bQ8VCH0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Acaa1bQ8VCH0 Gm25238-201ENSMUST00000174914 89 ntBASIC24.73■■□□□ 1.55
Acaa1bQ8VCH0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Acaa1bQ8VCH0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Acaa1bQ8VCH0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Acaa1bQ8VCH0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.54■■□□□ 1.52
Acaa1bQ8VCH0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Acaa1bQ8VCH0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Acaa1bQ8VCH0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Acaa1bQ8VCH0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Acaa1bQ8VCH0 Gm27325-201ENSMUST00000175467 74 ntBASIC24.44■■□□□ 1.5
Acaa1bQ8VCH0 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.42■■□□□ 1.5
Acaa1bQ8VCH0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
Acaa1bQ8VCH0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.37■■□□□ 1.49
Acaa1bQ8VCH0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Acaa1bQ8VCH0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Acaa1bQ8VCH0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Acaa1bQ8VCH0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Acaa1bQ8VCH0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.24■■□□□ 1.47
Acaa1bQ8VCH0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Acaa1bQ8VCH0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Acaa1bQ8VCH0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Acaa1bQ8VCH0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.16■■□□□ 1.46
Acaa1bQ8VCH0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Acaa1bQ8VCH0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Acaa1bQ8VCH0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Acaa1bQ8VCH0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.08■■□□□ 1.45
Acaa1bQ8VCH0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Acaa1bQ8VCH0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Acaa1bQ8VCH0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24■■□□□ 1.43
Acaa1bQ8VCH0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Acaa1bQ8VCH0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Acaa1bQ8VCH0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Acaa1bQ8VCH0 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.89■■□□□ 1.42
Acaa1bQ8VCH0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.84■■□□□ 1.41
Acaa1bQ8VCH0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Acaa1bQ8VCH0 Rab21-202ENSMUST00000218831 843 ntBASIC23.81■■□□□ 1.4
Acaa1bQ8VCH0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Acaa1bQ8VCH0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Acaa1bQ8VCH0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Acaa1bQ8VCH0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Acaa1bQ8VCH0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Acaa1bQ8VCH0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Acaa1bQ8VCH0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Acaa1bQ8VCH0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.7■■□□□ 1.38
Acaa1bQ8VCH0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Acaa1bQ8VCH0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Acaa1bQ8VCH0 Gm25262-201ENSMUST00000174934 133 ntBASIC23.6■■□□□ 1.37
Acaa1bQ8VCH0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
Acaa1bQ8VCH0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Acaa1bQ8VCH0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Acaa1bQ8VCH0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.54■■□□□ 1.36
Acaa1bQ8VCH0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Acaa1bQ8VCH0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Acaa1bQ8VCH0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Acaa1bQ8VCH0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Acaa1bQ8VCH0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms