RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NRGNQ92686 78 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 VSIRQ9H7M9 311 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 BEX4Q9NWD9 120 aaPredicted RBP21.05■□□□□ 0.96
SHOX2-204ENST00000483851 MOSP00540 346 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 CTRB1P17538 263 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 FLI1Q01543 452 aaPredicted RBP21.05■□□□□ 0.96
SHOX2-204ENST00000483851 ZNF726P1Q15940 193 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 CTRB2Q6GPI1 263 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 WDR83OSQ9Y284 106 aa21.05■□□□□ 0.96
SHOX2-204ENST00000483851 C7orf77A4D0Y5 90 aa21.04■□□□□ 0.96
SHOX2-204ENST00000483851 ACTL6BO94805 426 aa21.04■□□□□ 0.96
SHOX2-204ENST00000483851 OPN1MWP04001 364 aa21.04■□□□□ 0.96
SHOX2-204ENST00000483851 OPN1MW2P0DN77 364 aa21.04■□□□□ 0.96
SHOX2-204ENST00000483851 OPN1MW3P0DN78 364 aa21.04■□□□□ 0.96
SHOX2-204ENST00000483851 CLEC12BQ2HXU8 276 aa21.04■□□□□ 0.96
SHOX2-204ENST00000483851 NPBQ8NG41 125 aa21.04■□□□□ 0.96
SHOX2-204ENST00000483851 METTL1Q9UBP6 276 aaKnown RBP21.04■□□□□ 0.96
SHOX2-204ENST00000483851 HSPB1P04792 205 aaKnown RBP21.03■□□□□ 0.96
SHOX2-204ENST00000483851 OR13C7P0DN81 318 aa21.03■□□□□ 0.96
SHOX2-204ENST00000483851 EBI3Q14213 229 aa21.03■□□□□ 0.96
SHOX2-204ENST00000483851 SSX2Q16385 188 aa21.03■□□□□ 0.96
SHOX2-204ENST00000483851 OR2T10Q8NGZ9 312 aa21.03■□□□□ 0.96
SHOX2-204ENST00000483851 TUBA4BQ9H853 241 aa21.03■□□□□ 0.96
SHOX2-204ENST00000483851 RAB2AP61019 212 aa21.03■□□□□ 0.96
SHOX2-204ENST00000483851 LRRC75A-AS1Q8N1F1 130 aa21.03■□□□□ 0.96
SHOX2-204ENST00000483851 C17orf112F2Z3M2 114 aa21.02■□□□□ 0.96
SHOX2-204ENST00000483851 RNASE2P10153 161 aaKnown RBP21.02■□□□□ 0.96
SHOX2-204ENST00000483851 FGF7P21781 194 aa21.02■□□□□ 0.96
SHOX2-204ENST00000483851 SUB1P53999 127 aaKnown RBP eCLIP21.02■□□□□ 0.96
SHOX2-204ENST00000483851 HAGHQ16775 308 aa21.02■□□□□ 0.96
SHOX2-204ENST00000483851 SOHLH1Q5JUK2 328 aa21.02■□□□□ 0.96
SHOX2-204ENST00000483851 RXFP4Q8TDU9 374 aa21.02■□□□□ 0.96
SHOX2-204ENST00000483851 C1orf159Q96HA4 380 aa21.02■□□□□ 0.96
SHOX2-204ENST00000483851 TPSG1Q9NRR2 321 aa21.02■□□□□ 0.96
SHOX2-204ENST00000483851 WNK2Q9Y3S1 2297 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 CGB1A6NKQ9 187 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 NDUFA3O95167 84 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 CNTFRP26992 372 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 COMPP49747 757 aaPredicted RBP21.01■□□□□ 0.95
SHOX2-204ENST00000483851 KHDC3LQ587J8 217 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 TMEM41BQ5BJD5 291 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 C15orf54Q8N8G6 183 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 ZNF709Q8N972 641 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 NPVFQ9HCQ7 196 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 RPS10P5Q9NQ39 176 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 CHD6Q8TD26 2715 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 SPG11Q96JI7 2443 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 LOC102723971A0A1B0GUV8 181 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 A0A1W2PRD5 423 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 A0A1W2PRF3 423 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 A0A1W2PRM7 423 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 NBR2O15453 112 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 IGKV1D-33P01593 117 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 IGKV1-33P01594 117 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 MBP02144 154 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 RPL27AP46776 148 aaKnown RBP21.01■□□□□ 0.95
SHOX2-204ENST00000483851 RHEBQ15382 184 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 SSX7Q7RTT5 188 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 OR10W1Q8NGF6 305 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 RCC1LQ96I51 464 aaKnown RBP21.01■□□□□ 0.95
SHOX2-204ENST00000483851 EAF1Q96JC9 268 aaPredicted RBP21.01■□□□□ 0.95
SHOX2-204ENST00000483851 SRSF8Q9BRL6 282 aaKnown RBP21.01■□□□□ 0.95
SHOX2-204ENST00000483851 NPCDR1Q9BY65 106 aa21.01■□□□□ 0.95
SHOX2-204ENST00000483851 E7EUB6 86 aa21■□□□□ 0.95
SHOX2-204ENST00000483851 MSMBP08118 114 aa21■□□□□ 0.95
SHOX2-204ENST00000483851 SNRNP70P08621 437 aaKnown RBP21■□□□□ 0.95
SHOX2-204ENST00000483851 OR10G4Q8NGN3 311 aa21■□□□□ 0.95
SHOX2-204ENST00000483851 B4DSR2 109 aa20.99■□□□□ 0.95
SHOX2-204ENST00000483851 COL8A1P27658 744 aa20.99■□□□□ 0.95
SHOX2-204ENST00000483851 AKR1C3P42330 323 aa20.99■□□□□ 0.95
SHOX2-204ENST00000483851 MMDQ15546 238 aa20.99■□□□□ 0.95
SHOX2-204ENST00000483851 NPFFO15130 113 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 FOLR2P14207 255 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 GATA3P23771 443 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 PMS2P11Q13670 270 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 TNXAQ16473 311 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 TREML4Q6UXN2 200 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 CACNG8Q8WXS5 425 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 FBXL15Q9H469 300 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 CENPVL3A0A0U1RRI6 287 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 M0R036 132 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 CRYBA1P05813 215 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 BRS3P32247 399 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 WT1-ASQ06250 92 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 DYNAPQ8N1N2 210 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 ZNF114Q8NC26 417 aa20.98■□□□□ 0.95
SHOX2-204ENST00000483851 RNASEH2CQ8TDP1 164 aaKnown RBP20.98■□□□□ 0.95
SHOX2-204ENST00000483851 MED13LQ71F56 2210 aa20.97■□□□□ 0.95
SHOX2-204ENST00000483851 SAA4P35542 130 aa20.97■□□□□ 0.95
SHOX2-204ENST00000483851 GPX4P36969 197 aaPredicted RBP20.97■□□□□ 0.95
SHOX2-204ENST00000483851 C10orf55Q5SWW7 151 aa20.97■□□□□ 0.95
SHOX2-204ENST00000483851 Q8N6K4 173 aa20.97■□□□□ 0.95
SHOX2-204ENST00000483851 AJUBAQ96IF1 538 aa20.97■□□□□ 0.95
SHOX2-204ENST00000483851 C20orf24Q9BUV8 137 aa20.97■□□□□ 0.95
SHOX2-204ENST00000483851 KCNIP2Q9NS61 270 aa20.97■□□□□ 0.95
SHOX2-204ENST00000483851 PLGLAQ15195 96 aa20.96■□□□□ 0.95
SHOX2-204ENST00000483851 AKIRIN2Q53H80 203 aa20.96■□□□□ 0.95
SHOX2-204ENST00000483851 LSM4Q9Y4Z0 139 aaKnown RBP20.96■□□□□ 0.95
SHOX2-204ENST00000483851 ABCA2Q9BZC7 2435 aa20.96■□□□□ 0.95
SHOX2-204ENST00000483851 TRAV20A0A0B4J274 112 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms