RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	SKG6	P32900	734 aa	Predicted RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	VID24	P38263	362 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	ATG14	P38270	344 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	NMD3	P38861	518 aa	Known RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	FMO1	P38866	432 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	RPS26A	P39938	119 aa	Known RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	RPS26B	P39939	119 aa	Known RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	PIC2	P40035	300 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	ULP2	P40537	1034 aa	Predicted RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	EPL1	P43572	832 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	BFA1	P47113	574 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	ECM7	Q06200	448 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	CDC53	Q12018	815 aa	Known RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	NSI1	Q12457	570 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	SSB1	P11484	613 aa	Known RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	TAF13	P11747	167 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	THR4	P16120	514 aa	Known RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	SPO11	P23179	398 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	CYS3	P31373	394 aa	Known RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
SPN1	YPR133C	PEP7	P32609	515 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	COT1	P32798	439 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	ELM1	P32801	640 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	MNR2	P35724	969 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	POL12	P38121	705 aa	Predicted RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	YBR284W	P38150	797 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	HSE1	P38753	452 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	ERC1	P38767	581 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	SFB3	P38810	929 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	RPN3	P40016	523 aa	Known RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	SSB2	P40150	613 aa	Known RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	STB4	P50104	949 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	CUL3	P53202	744 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	SPC98	P53540	846 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	HXT17	P53631	564 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	YNR061C	P53747	219 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	PGA2	P53903	129 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	NCS2	P53923	493 aa	Predicted RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	ALG11	P53954	548 aa	Known RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	ADA2	Q02336	434 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	OSW2	Q12202	724 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	PDH1	Q12428	516 aa	Known RBP	4.68	□□□□□ -1.66
SPN1	YPR133C	OSH2	Q12451	1283 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	APM4	Q99186	491 aa		4.68	□□□□□ -1.66
SPN1	YPR133C	HEM13	P11353	328 aa	Known RBP	4.67	□□□□□ -1.66
SPN1	YPR133C	KGD2	P19262	463 aa	Predicted RBP	4.67	□□□□□ -1.66
SPN1	YPR133C	PET112	P33893	541 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	ADD66	P36040	267 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	DUG2	P38149	878 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	OPY1	P38271	328 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	RPN10	P38886	268 aa	Known RBP	4.67	□□□□□ -1.66
SPN1	YPR133C	TAT2	P38967	592 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	STT3	P39007	718 aa	Known RBP	4.67	□□□□□ -1.66
SPN1	YPR133C	SPO22	P40511	975 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	CAF130	P53280	1122 aa	Predicted RBP	4.67	□□□□□ -1.66
SPN1	YPR133C	CWC24	P53769	259 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	RKM2	Q03942	479 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	FUS2	Q05670	677 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	BRE4	Q07660	1125 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	SLK19	Q08581	821 aa	Known RBP	4.67	□□□□□ -1.66
SPN1	YPR133C	SPE3	Q12074	293 aa	Known RBP	4.67	□□□□□ -1.66
SPN1	YPR133C	CEX1	Q12453	761 aa		4.67	□□□□□ -1.66
SPN1	YPR133C	PCK1	P10963	549 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	DBP5	P20449	482 aa	Known RBP	4.66	□□□□□ -1.66
SPN1	YPR133C	VPS1	P21576	704 aa	Known RBP	4.66	□□□□□ -1.66
SPN1	YPR133C	SIR1	P21691	654 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	MCM3	P24279	971 aa	Known RBP	4.66	□□□□□ -1.66
SPN1	YPR133C	MSH2	P25847	964 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	MED6	P38782	295 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	SIP5	P40210	489 aa	Known RBP	4.66	□□□□□ -1.66
SPN1	YPR133C	GYP8	P43570	497 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	YNR063W	P53749	607 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	STP1	Q00947	519 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	TRS130	Q03660	1102 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	YLH47	Q06493	454 aa		4.66	□□□□□ -1.66
SPN1	YPR133C	GAL80	P04387	435 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	GCD1	P09032	578 aa	Predicted RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	CDC6	P09119	513 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	MATALPHA2	P0CY08	210 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	HMLALPHA2	P0CY09	210 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	RPL4A	P10664	362 aa	Known RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	STE11	P23561	717 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	PIH1	P38768	344 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	HXT13	P39924	564 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	UBP5	P39944	805 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	YJR142W	P47173	342 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	RPL4B	P49626	362 aa	Known RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	ARK1	P53974	638 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	SDH1	Q00711	640 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	CWC21	Q03375	135 aa	Known RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	TPP1	Q03796	238 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	TMN2	Q04562	672 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	RSA3	Q05942	220 aa	Known RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	PUS7	Q08647	676 aa	Known RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	HRK1	Q08732	759 aa	Known RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	LEA1	Q08963	238 aa	Predicted RBP	4.65	□□□□□ -1.67
SPN1	YPR133C	YVC1	Q12324	675 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	SMC6	Q12749	1114 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	MPD2	Q99316	277 aa		4.65	□□□□□ -1.67
SPN1	YPR133C	CET1	O13297	549 aa	Predicted RBP	4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms