RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeastyeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA49YNL248C SHS1Q07657 551 aa5.48□□□□□ -1.53
RPA49YNL248C ABP140Q08641 628 aaKnown RBP5.48□□□□□ -1.53
RPA49YNL248C MSC6Q08818 692 aaKnown RBP5.48□□□□□ -1.53
RPA49YNL248C CFT2Q12102 859 aaPredicted RBP5.48□□□□□ -1.53
RPA49YNL248C STB3Q12427 513 aa5.48□□□□□ -1.53
RPA49YNL248C TSC13Q99190 310 aa5.48□□□□□ -1.53
RPA49YNL248C RPS3P05750 240 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C YER152CP10356 443 aa5.47□□□□□ -1.53
RPA49YNL248C PYC1P11154 1178 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C PDC5P16467 563 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C RNR1P21524 888 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C MRPL25P23369 157 aa5.47□□□□□ -1.53
RPA49YNL248C RRT12P25381 491 aa5.47□□□□□ -1.53
RPA49YNL248C CAP1P28495 268 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C GPI10P30777 616 aa5.47□□□□□ -1.53
RPA49YNL248C YSW1P38280 609 aa5.47□□□□□ -1.53
RPA49YNL248C AMN1P38285 549 aaPredicted RBP5.47□□□□□ -1.53
RPA49YNL248C MMS21P38632 267 aa5.47□□□□□ -1.53
RPA49YNL248C APM2P38700 605 aa5.47□□□□□ -1.53
RPA49YNL248C AIM21P40563 679 aa5.47□□□□□ -1.53
RPA49YNL248C RGD2P43556 714 aa5.47□□□□□ -1.53
RPA49YNL248C DAS1P47005 663 aa5.47□□□□□ -1.53
RPA49YNL248C RPS7BP48164 190 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C ZIP2P53061 704 aa5.47□□□□□ -1.53
RPA49YNL248C ATG1P53104 897 aa5.47□□□□□ -1.53
RPA49YNL248C SHR3Q02774 210 aa5.47□□□□□ -1.53
RPA49YNL248C TY1A-DR2Q03964 440 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C UFO1Q04511 668 aa5.47□□□□□ -1.53
RPA49YNL248C ERV41Q04651 352 aa5.47□□□□□ -1.53
RPA49YNL248C VHS3Q08438 674 aa5.47□□□□□ -1.53
RPA49YNL248C YOR059CQ08448 450 aaKnown RBP5.47□□□□□ -1.53
RPA49YNL248C NCA2Q12374 616 aa5.47□□□□□ -1.53
RPA49YNL248C ECM3Q99252 613 aa5.47□□□□□ -1.53
RPA49YNL248C AI5_BETAQ9ZZX0 354 aa5.47□□□□□ -1.53
RPA49YNL248C CMD1P06787 147 aaKnown RBP5.46□□□□□ -1.54
RPA49YNL248C TUB3P09734 445 aaKnown RBP5.46□□□□□ -1.54
RPA49YNL248C PRP16P15938 1071 aaPredicted RBP5.46□□□□□ -1.54
RPA49YNL248C SRV2P17555 526 aaKnown RBP5.46□□□□□ -1.54
RPA49YNL248C CDC42P19073 191 aa5.46□□□□□ -1.54
RPA49YNL248C COX11P19516 300 aaKnown RBP5.46□□□□□ -1.54
RPA49YNL248C PUF4P25339 888 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
RPA49YNL248C EFT1P32324 842 aaKnown RBP5.46□□□□□ -1.54
RPA49YNL248C ABD1P32783 436 aaPredicted RBP5.46□□□□□ -1.54
RPA49YNL248C SKG6P32900 734 aaPredicted RBP5.46□□□□□ -1.54
RPA49YNL248C PMC1P38929 1173 aaPredicted RBP5.46□□□□□ -1.54
RPA49YNL248C MRX1P40050 688 aa5.46□□□□□ -1.54
RPA49YNL248C ASG1P40467 964 aa5.46□□□□□ -1.54
RPA49YNL248C PHO86P46956 311 aa5.46□□□□□ -1.54
RPA49YNL248C COG6P53959 839 aa5.46□□□□□ -1.54
RPA49YNL248C GPD1Q00055 391 aaKnown RBP5.46□□□□□ -1.54
RPA49YNL248C VPS72Q03388 795 aa5.46□□□□□ -1.54
RPA49YNL248C TRS130Q03660 1102 aa5.46□□□□□ -1.54
RPA49YNL248C PPM1Q04081 328 aa5.46□□□□□ -1.54
RPA49YNL248C YDR338CQ05497 695 aa5.46□□□□□ -1.54
RPA49YNL248C YLR455WQ06188 304 aa5.46□□□□□ -1.54
RPA49YNL248C MCA1Q08601 432 aa5.46□□□□□ -1.54
RPA49YNL248C TAF10Q12030 206 aa5.46□□□□□ -1.54
RPA49YNL248C HFI1Q12060 488 aa5.46□□□□□ -1.54
RPA49YNL248C CYT1P07143 309 aa5.45□□□□□ -1.54
RPA49YNL248C ADE3P07245 946 aaKnown RBP5.45□□□□□ -1.54
RPA49YNL248C GCR1P07261 785 aa5.45□□□□□ -1.54
RPA49YNL248C PEP5P12868 1029 aa5.45□□□□□ -1.54
RPA49YNL248C CBF1P17106 351 aa5.45□□□□□ -1.54
RPA49YNL248C AEP2P22136 580 aa5.45□□□□□ -1.54
RPA49YNL248C YCR051WP25631 222 aa5.45□□□□□ -1.54
RPA49YNL248C MGT1P26188 188 aa5.45□□□□□ -1.54
RPA49YNL248C DPH2P32461 534 aa5.45□□□□□ -1.54
RPA49YNL248C EFB1P32471 206 aaKnown RBP5.45□□□□□ -1.54
RPA49YNL248C MMS4P38257 691 aa5.45□□□□□ -1.54
RPA49YNL248C MED8P38304 223 aa5.45□□□□□ -1.54
RPA49YNL248C TMN3P40071 706 aa5.45□□□□□ -1.54
RPA49YNL248C HOP2P53187 214 aa5.45□□□□□ -1.54
RPA49YNL248C ADA2Q02336 434 aa5.45□□□□□ -1.54
RPA49YNL248C FAR8Q05040 523 aa5.45□□□□□ -1.54
RPA49YNL248C GIS3Q12418 502 aa5.45□□□□□ -1.54
RPA49YNL248C TRM11Q12463 433 aa5.45□□□□□ -1.54
RPA49YNL248C GAL10P04397 699 aa5.44□□□□□ -1.54
RPA49YNL248C LEU1P07264 779 aaKnown RBP5.44□□□□□ -1.54
RPA49YNL248C ASP3-2P0CX77 362 aa5.44□□□□□ -1.54
RPA49YNL248C ASP3-3P0CX78 362 aa5.44□□□□□ -1.54
RPA49YNL248C ASP3-4P0CX79 362 aa5.44□□□□□ -1.54
RPA49YNL248C ASP3-1P0CZ17 362 aa5.44□□□□□ -1.54
RPA49YNL248C SFL1P20134 766 aa5.44□□□□□ -1.54
RPA49YNL248C ARG1P22768 420 aa5.44□□□□□ -1.54
RPA49YNL248C KIN82P25341 720 aa5.44□□□□□ -1.54
RPA49YNL248C PHO87P25360 923 aa5.44□□□□□ -1.54
RPA49YNL248C DBP7P36120 742 aaKnown RBP5.44□□□□□ -1.54
RPA49YNL248C PCA1P38360 1216 aa5.44□□□□□ -1.54
RPA49YNL248C PCM1P38628 557 aaKnown RBP5.44□□□□□ -1.54
RPA49YNL248C KHA1P40309 873 aa5.44□□□□□ -1.54
RPA49YNL248C YTA6P40328 754 aa5.44□□□□□ -1.54
RPA49YNL248C CWC21Q03375 135 aaKnown RBP5.44□□□□□ -1.54
RPA49YNL248C YMR027WQ04371 470 aa5.44□□□□□ -1.54
RPA49YNL248C PRM6Q04705 352 aa5.44□□□□□ -1.54
RPA49YNL248C YMR321CQ04898 105 aa5.44□□□□□ -1.54
RPA49YNL248C ECM7Q06200 448 aa5.44□□□□□ -1.54
RPA49YNL248C SGT2Q12118 346 aaKnown RBP5.44□□□□□ -1.54
RPA49YNL248C RRD2Q12461 358 aa5.44□□□□□ -1.54
RPA49YNL248C BI2P03873 423 aa5.43□□□□□ -1.54
RPA49YNL248C BI4P03879 638 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms