RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	OPT2	Q06593	877 aa		4.61	□□□□□ -1.67
APC1	YNL172W	RRP36	Q12481	300 aa	Predicted RBP	4.61	□□□□□ -1.67
APC1	YNL172W	CDC26	P14724	124 aa		4.61	□□□□□ -1.67
APC1	YNL172W	SNT1	P25357	1226 aa		4.61	□□□□□ -1.67
APC1	YNL172W	PRR1	P28708	518 aa		4.61	□□□□□ -1.67
APC1	YNL172W	SRB5	P32585	307 aa		4.61	□□□□□ -1.67
APC1	YNL172W	OPT1	P40897	799 aa		4.61	□□□□□ -1.67
APC1	YNL172W	CTF18	P49956	741 aa		4.61	□□□□□ -1.67
APC1	YNL172W	PRP38	Q00723	242 aa	Predicted RBP	4.61	□□□□□ -1.67
APC1	YNL172W	YML082W	Q04533	649 aa	Known RBP	4.61	□□□□□ -1.67
APC1	YNL172W	NOB1	Q08444	459 aa	Known RBP	4.61	□□□□□ -1.67
APC1	YNL172W	ABP140	Q08641	628 aa	Known RBP	4.61	□□□□□ -1.67
APC1	YNL172W	PGC1	Q08959	321 aa		4.61	□□□□□ -1.67
APC1	YNL172W	CBS2	P14905	389 aa		4.6	□□□□□ -1.67
APC1	YNL172W	TFB1	P32776	642 aa		4.6	□□□□□ -1.67
APC1	YNL172W	CTF13	P35203	478 aa		4.6	□□□□□ -1.67
APC1	YNL172W	SPT23	P35210	1082 aa		4.6	□□□□□ -1.67
APC1	YNL172W	KAP104	P38217	918 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	RVS167	P39743	482 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	BIR1	P47134	954 aa		4.6	□□□□□ -1.67
APC1	YNL172W	PAN2	P53010	1115 aa	Predicted RBP	4.6	□□□□□ -1.67
APC1	YNL172W	HST1	P53685	503 aa		4.6	□□□□□ -1.67
APC1	YNL172W	PDR16	P53860	351 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	YNL146W	P53906	100 aa		4.6	□□□□□ -1.67
APC1	YNL172W	SPE1	P08432	466 aa		4.6	□□□□□ -1.67
APC1	YNL172W	YKR104W	P0CE69	306 aa		4.6	□□□□□ -1.67
APC1	YNL172W	APE1	P14904	514 aa		4.6	□□□□□ -1.67
APC1	YNL172W	GAL11	P19659	1081 aa		4.6	□□□□□ -1.67
APC1	YNL172W	DOM34	P33309	386 aa		4.6	□□□□□ -1.67
APC1	YNL172W	RPF2	P36160	344 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	PIH1	P38768	344 aa		4.6	□□□□□ -1.67
APC1	YNL172W	PUS4	P48567	403 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	SHE9	Q04172	456 aa		4.6	□□□□□ -1.67
APC1	YNL172W	RIM15	P43565	1770 aa		4.6	□□□□□ -1.67
APC1	YNL172W	YPK1	P12688	680 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	MCM3	P24279	971 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	GID7	P25569	745 aa		4.6	□□□□□ -1.67
APC1	YNL172W	PXL1	P36166	706 aa		4.6	□□□□□ -1.67
APC1	YNL172W	SLX1	P38324	304 aa		4.6	□□□□□ -1.67
APC1	YNL172W	YTA12	P40341	825 aa		4.6	□□□□□ -1.67
APC1	YNL172W	ECL1	P48235	211 aa		4.6	□□□□□ -1.67
APC1	YNL172W	SWC4	P53201	476 aa		4.6	□□□□□ -1.67
APC1	YNL172W	KTR5	P53966	522 aa	Predicted RBP	4.6	□□□□□ -1.67
APC1	YNL172W	TFB2	Q02939	513 aa		4.6	□□□□□ -1.67
APC1	YNL172W	ENT5	Q03769	411 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	CDA1	Q06702	301 aa		4.6	□□□□□ -1.67
APC1	YNL172W	NBP2	Q12163	236 aa		4.6	□□□□□ -1.67
APC1	YNL172W	HSP60	P19882	572 aa	Known RBP	4.6	□□□□□ -1.67
APC1	YNL172W	KIC1	P38692	1080 aa		4.6	□□□□□ -1.67
APC1	YNL172W	TOM22	P49334	152 aa		4.6	□□□□□ -1.67
APC1	YNL172W	BTN2	P53286	410 aa		4.6	□□□□□ -1.67
APC1	YNL172W	ORC4	P54791	529 aa		4.6	□□□□□ -1.67
APC1	YNL172W	COS7	Q07788	383 aa		4.6	□□□□□ -1.67
APC1	YNL172W	PPR1	P07272	904 aa	Predicted RBP	4.59	□□□□□ -1.67
APC1	YNL172W	MEI4	P29467	408 aa		4.59	□□□□□ -1.67
APC1	YNL172W	KES1	P35844	434 aa	Known RBP	4.59	□□□□□ -1.67
APC1	YNL172W	MAF1	P41910	395 aa		4.59	□□□□□ -1.67
APC1	YNL172W	POB3	Q04636	552 aa	Known RBP	4.59	□□□□□ -1.67
APC1	YNL172W	AIM44	Q99299	758 aa		4.59	□□□□□ -1.67
APC1	YNL172W	CHO2	P05374	869 aa	Known RBP	4.59	□□□□□ -1.67
APC1	YNL172W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	RIP-Chip
APC1	YNL172W	MBR1	P23493	339 aa		4.59	□□□□□ -1.67
APC1	YNL172W	UBP14	P38237	781 aa	Known RBP	4.59	□□□□□ -1.67
APC1	YNL172W	PCI8	P40512	444 aa		4.59	□□□□□ -1.67
APC1	YNL172W	ARG7	Q04728	441 aa		4.59	□□□□□ -1.67
APC1	YNL172W	IVY1	Q04934	453 aa		4.59	□□□□□ -1.67
APC1	YNL172W	HRD3	Q05787	833 aa		4.59	□□□□□ -1.67
APC1	YNL172W	YLR012C	Q07927	99 aa		4.59	□□□□□ -1.67
APC1	YNL172W	TFC1	P32367	649 aa		4.59	□□□□□ -1.67
APC1	YNL172W	PLC1	P32383	869 aa		4.59	□□□□□ -1.67
APC1	YNL172W	RIM101	P33400	625 aa		4.59	□□□□□ -1.67
APC1	YNL172W	YMC2	P38087	329 aa		4.59	□□□□□ -1.67
APC1	YNL172W	NUP85	P46673	744 aa		4.59	□□□□□ -1.67
APC1	YNL172W	HPT1	Q04178	221 aa	Known RBP	4.59	□□□□□ -1.67
APC1	YNL172W	TMA16	Q08687	178 aa		4.59	□□□□□ -1.67
APC1	YNL172W	LSP1	Q12230	341 aa	Known RBP	4.59	□□□□□ -1.67
APC1	YNL172W	PRP4	P20053	465 aa	Known RBP	4.59	□□□□□ -1.68
APC1	YNL172W	VPS51	P36116	164 aa		4.59	□□□□□ -1.68
APC1	YNL172W	PIK1	P39104	1066 aa		4.59	□□□□□ -1.68
APC1	YNL172W	SUM1	P46676	1062 aa		4.59	□□□□□ -1.68
APC1	YNL172W	YJR124C	P47159	448 aa		4.59	□□□□□ -1.68
APC1	YNL172W	YGR237C	P50089	785 aa		4.59	□□□□□ -1.68
APC1	YNL172W	MRPS35	P53292	345 aa		4.59	□□□□□ -1.68
APC1	YNL172W	NOP15	P53927	220 aa	Predicted RBP	4.59	□□□□□ -1.68
APC1	YNL172W	SPO21	Q12411	609 aa		4.59	□□□□□ -1.68
APC1	YNL172W	PNO1	Q99216	274 aa	Known RBP	4.59	□□□□□ -1.68
APC1	YNL172W	DBP3	P20447	523 aa	Known RBP	4.59	□□□□□ -1.68
APC1	YNL172W	TEF4	P36008	412 aa	Known RBP	4.59	□□□□□ -1.68
APC1	YNL172W	SMA1	Q02651	245 aa		4.59	□□□□□ -1.68
APC1	YNL172W	VPS60	Q03390	229 aa		4.59	□□□□□ -1.68
APC1	YNL172W	GRX8	Q05926	109 aa		4.59	□□□□□ -1.68
APC1	YNL172W	BLS1	Q06071	122 aa		4.59	□□□□□ -1.68
APC1	YNL172W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.68	not detected
APC1	YNL172W	YDR056C	Q12025	205 aa		4.59	□□□□□ -1.68
APC1	YNL172W	MIS1	P09440	975 aa	Known RBP	4.58	□□□□□ -1.68
APC1	YNL172W	RVS161	P25343	265 aa	Known RBP	4.58	□□□□□ -1.68
APC1	YNL172W	TMT1	P32643	299 aa		4.58	□□□□□ -1.68
APC1	YNL172W	CYM1	P32898	989 aa		4.58	□□□□□ -1.68
APC1	YNL172W	LYS9	P38999	446 aa		4.58	□□□□□ -1.68
APC1	YNL172W	CCT6	P39079	546 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms