RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	YGR283C	P53336	341 aa	Predicted RBP	13.28	□□□□□ -0.28
LSM3	YLR438C-A	CDC55	Q00362	526 aa		13.28	□□□□□ -0.28
LSM3	YLR438C-A	YDR278C	Q05612	105 aa		13.28	□□□□□ -0.28
LSM3	YLR438C-A	ECI1	Q05871	280 aa		13.28	□□□□□ -0.28
LSM3	YLR438C-A	THI21	Q08975	551 aa		13.28	□□□□□ -0.28
LSM3	YLR438C-A	TUB3	P09734	445 aa	Known RBP	13.27	□□□□□ -0.29
LSM3	YLR438C-A	RGR1	P19263	1082 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	CNS1	P33313	385 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	SIF2	P38262	535 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	SSP1	P38871	571 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	YNL040W	P53960	456 aa	Predicted RBP	13.27	□□□□□ -0.29
LSM3	YLR438C-A	YNL034W	P53963	612 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	YNL018C	P53976	612 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	CEG1	Q01159	459 aa	Predicted RBP	13.27	□□□□□ -0.29
LSM3	YLR438C-A	URH1	Q04179	340 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	HRD3	Q05787	833 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	ARP7	Q12406	477 aa		13.27	□□□□□ -0.29
LSM3	YLR438C-A	SPE1	P08432	466 aa		13.26	□□□□□ -0.29
LSM3	YLR438C-A	YPK1	P12688	680 aa	Known RBP	13.26	□□□□□ -0.29
LSM3	YLR438C-A	PEX1	P24004	1043 aa		13.26	□□□□□ -0.29
LSM3	YLR438C-A	STB5	P38699	743 aa		13.26	□□□□□ -0.29
LSM3	YLR438C-A	YPL062W	Q02781	134 aa		13.26	□□□□□ -0.29
LSM3	YLR438C-A	GCN5	Q03330	439 aa		13.26	□□□□□ -0.29
LSM3	YLR438C-A	VTI1	Q04338	217 aa		13.26	□□□□□ -0.29
LSM3	YLR438C-A	YDL073W	Q07454	984 aa		13.26	□□□□□ -0.29
LSM3	YLR438C-A	RRP1	P35178	278 aa	Predicted RBP	13.25	□□□□□ -0.29
LSM3	YLR438C-A	PCA1	P38360	1216 aa		13.25	□□□□□ -0.29
LSM3	YLR438C-A	FHL1	P39521	936 aa		13.25	□□□□□ -0.29
LSM3	YLR438C-A	ERP2	P39704	215 aa		13.25	□□□□□ -0.29
LSM3	YLR438C-A	HER2	Q03557	464 aa		13.25	□□□□□ -0.29
LSM3	YLR438C-A	RRB1	Q04225	511 aa	Known RBP	13.25	□□□□□ -0.29
LSM3	YLR438C-A	SPG3	Q04398	127 aa	Predicted RBP	13.25	□□□□□ -0.29
LSM3	YLR438C-A	KAP95	Q06142	861 aa	Known RBP	13.25	□□□□□ -0.29
LSM3	YLR438C-A	AAD4	Q07747	329 aa		13.25	□□□□□ -0.29
LSM3	YLR438C-A	APL5	Q08951	932 aa	Known RBP	13.25	□□□□□ -0.29
LSM3	YLR438C-A	OLA1	P38219	394 aa	Known RBP	13.24	□□□□□ -0.29
LSM3	YLR438C-A	END3	P39013	349 aa		13.24	□□□□□ -0.29
LSM3	YLR438C-A	BTT1	P40314	149 aa	Predicted RBP	13.24	□□□□□ -0.29
LSM3	YLR438C-A	PRK1	P40494	810 aa		13.24	□□□□□ -0.29
LSM3	YLR438C-A	PEX31	P53203	462 aa		13.24	□□□□□ -0.29
LSM3	YLR438C-A	MTG1	Q03151	367 aa	Predicted RBP	13.24	□□□□□ -0.29
LSM3	YLR438C-A	SND1	Q04007	877 aa		13.24	□□□□□ -0.29
LSM3	YLR438C-A	ECM22	Q05958	814 aa	Predicted RBP	13.24	□□□□□ -0.29
LSM3	YLR438C-A	THI7	Q05998	598 aa		13.24	□□□□□ -0.29
LSM3	YLR438C-A	PIG1	Q06216	648 aa		13.24	□□□□□ -0.29
LSM3	YLR438C-A	PMT7	Q06644	662 aa		13.24	□□□□□ -0.29
LSM3	YLR438C-A	PAB1	P04147	577 aa	Known RBP RIP-Chip data	13.23	□□□□□ -0.29	RIP-Chip
LSM3	YLR438C-A	SFL1	P20134	766 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	SLY1	P22213	666 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	CAP1	P28495	268 aa	Known RBP	13.23	□□□□□ -0.29
LSM3	YLR438C-A	MEI4	P29467	408 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	DAL1	P32375	460 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	DSS4	P32601	143 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	UBC6	P33296	250 aa	Predicted RBP	13.23	□□□□□ -0.29
LSM3	YLR438C-A	YBR225W	P38321	900 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	TIF5	P38431	405 aa	Known RBP	13.23	□□□□□ -0.29
LSM3	YLR438C-A	UTP8	P53276	713 aa	Known RBP	13.23	□□□□□ -0.29
LSM3	YLR438C-A	COP1	P53622	1201 aa	Known RBP	13.23	□□□□□ -0.29
LSM3	YLR438C-A	YMR187C	Q03236	431 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	ATG23	Q06671	453 aa		13.23	□□□□□ -0.29
LSM3	YLR438C-A	HMG2	P12684	1045 aa		13.22	□□□□□ -0.29
LSM3	YLR438C-A	COQ8	P27697	501 aa		13.22	□□□□□ -0.29
LSM3	YLR438C-A	HSP78	P33416	811 aa		13.22	□□□□□ -0.29
LSM3	YLR438C-A	YKR051W	P36142	418 aa		13.22	□□□□□ -0.29
LSM3	YLR438C-A	ARG2	P40360	574 aa		13.22	□□□□□ -0.29
LSM3	YLR438C-A	TMA108	P40462	946 aa		13.22	□□□□□ -0.29
LSM3	YLR438C-A	PRP31	P49704	494 aa	Predicted RBP	13.22	□□□□□ -0.29
LSM3	YLR438C-A	NDJ1	Q12366	352 aa		13.22	□□□□□ -0.29
LSM3	YLR438C-A	CCP1	P00431	361 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	CDC8	P00572	216 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	GCG1	P32656	232 aa	Known RBP	13.21	□□□□□ -0.29
LSM3	YLR438C-A	NMD3	P38861	518 aa	Known RBP	13.21	□□□□□ -0.29
LSM3	YLR438C-A	RIM8	P53179	542 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	KTR6	P54070	446 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	BET4	Q00618	327 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	YVH1	Q02256	364 aa	Known RBP	13.21	□□□□□ -0.29
LSM3	YLR438C-A	UTP6	Q02354	440 aa	Known RBP	13.21	□□□□□ -0.29
LSM3	YLR438C-A	TDA9	Q04545	1251 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	TPO1	Q07824	586 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	YDR018C	Q12185	396 aa		13.21	□□□□□ -0.29
LSM3	YLR438C-A	YLR422W	Q06409	1932 aa		13.21	□□□□□ -0.3
LSM3	YLR438C-A	PEX28	P38848	579 aa		13.2	□□□□□ -0.3
LSM3	YLR438C-A	PRM9	P39551	298 aa		13.2	□□□□□ -0.3
LSM3	YLR438C-A	YMR134W	P40207	237 aa		13.2	□□□□□ -0.3
LSM3	YLR438C-A	INA17	Q02888	182 aa		13.2	□□□□□ -0.3
LSM3	YLR438C-A	SPE3	Q12074	293 aa	Known RBP	13.2	□□□□□ -0.3
LSM3	YLR438C-A	SVS1	Q12254	260 aa		13.2	□□□□□ -0.3
LSM3	YLR438C-A	RPO26	P20435	155 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	YIH1	P25637	258 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	RIM4	P38741	713 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	NUP60	P39705	539 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	FLC2	P39719	783 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	OYE3	P41816	400 aa	Predicted RBP	13.19	□□□□□ -0.3
LSM3	YLR438C-A	RGD2	P43556	714 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	HLJ1	P48353	224 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	PSP1	P50896	841 aa	Known RBP	13.19	□□□□□ -0.3
LSM3	YLR438C-A	AIM32	Q04689	311 aa		13.19	□□□□□ -0.3
LSM3	YLR438C-A	RIO1	Q12196	484 aa	Known RBP	13.19	□□□□□ -0.3
LSM3	YLR438C-A	PEX34	P25584	144 aa		13.18	□□□□□ -0.3
LSM3	YLR438C-A	RAD16	P31244	790 aa		13.18	□□□□□ -0.3

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