RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W TCD2P36101 447 aaKnown RBP5.86□□□□□ -1.47
SEC13YLR208W UTH1P36135 365 aa5.86□□□□□ -1.47
SEC13YLR208W CHS6P40955 746 aa5.86□□□□□ -1.47
SEC13YLR208W SEC27P41811 889 aaKnown RBP5.86□□□□□ -1.47
SEC13YLR208W SUM1P46676 1062 aa5.86□□□□□ -1.47
SEC13YLR208W CCM1P48237 864 aaPredicted RBP5.86□□□□□ -1.47
SEC13YLR208W RPL4BP49626 362 aaKnown RBP5.86□□□□□ -1.47
SEC13YLR208W CUL3P53202 744 aa5.86□□□□□ -1.47
SEC13YLR208W YGR016WP53209 190 aa5.86□□□□□ -1.47
SEC13YLR208W RET3P53600 189 aa5.86□□□□□ -1.47
SEC13YLR208W RSC4Q02206 625 aa5.86□□□□□ -1.47
SEC13YLR208W LEA1Q08963 238 aaPredicted RBP5.86□□□□□ -1.47
SEC13YLR208W HSF1P10961 833 aa5.85□□□□□ -1.47
SEC13YLR208W TCP1P12612 559 aaKnown RBP5.85□□□□□ -1.47
SEC13YLR208W BAS1P22035 811 aa5.85□□□□□ -1.47
SEC13YLR208W SKG6P32900 734 aaPredicted RBP5.85□□□□□ -1.47
SEC13YLR208W DUT1P33317 147 aa5.85□□□□□ -1.47
SEC13YLR208W YBR197CP38306 217 aa5.85□□□□□ -1.47
SEC13YLR208W SIP5P40210 489 aaKnown RBP5.85□□□□□ -1.47
SEC13YLR208W RMD8P43620 662 aa5.85□□□□□ -1.47
SEC13YLR208W PSP1P50896 841 aaKnown RBP5.85□□□□□ -1.47
SEC13YLR208W NMA2P53204 395 aa5.85□□□□□ -1.47
SEC13YLR208W CAF130P53280 1122 aaPredicted RBP5.85□□□□□ -1.47
SEC13YLR208W HOL1P53389 586 aa5.85□□□□□ -1.47
SEC13YLR208W PGA2P53903 129 aa5.85□□□□□ -1.47
SEC13YLR208W ARK1P53974 638 aa5.85□□□□□ -1.47
SEC13YLR208W HFD1Q04458 532 aa5.85□□□□□ -1.47
SEC13YLR208W CSM3Q04659 317 aa5.85□□□□□ -1.47
SEC13YLR208W ISR1Q06098 443 aaKnown RBP5.85□□□□□ -1.47
SEC13YLR208W OPY2Q06810 360 aa5.85□□□□□ -1.47
SEC13YLR208W RTT10Q08924 1013 aa5.85□□□□□ -1.47
SEC13YLR208W NEW1Q08972 1196 aaKnown RBP5.85□□□□□ -1.47
SEC13YLR208W YPQ1Q12010 308 aa5.85□□□□□ -1.47
SEC13YLR208W NOP58Q12499 511 aaKnown RBP5.85□□□□□ -1.47
SEC13YLR208W QCR6P00127 147 aa5.84□□□□□ -1.47
SEC13YLR208W KGD2P19262 463 aaPredicted RBP5.84□□□□□ -1.47
SEC13YLR208W RPB10P22139 70 aa5.84□□□□□ -1.47
SEC13YLR208W PPH22P23595 377 aa5.84□□□□□ -1.47
SEC13YLR208W SWI4P25302 1093 aaKnown RBP5.84□□□□□ -1.47
SEC13YLR208W ARE1P25628 610 aa5.84□□□□□ -1.47
SEC13YLR208W PRR1P28708 518 aa5.84□□□□□ -1.47
SEC13YLR208W PLC1P32383 869 aa5.84□□□□□ -1.47
SEC13YLR208W FBP26P32604 452 aa5.84□□□□□ -1.47
SEC13YLR208W ISC10P32645 267 aa5.84□□□□□ -1.47
SEC13YLR208W COT1P32798 439 aa5.84□□□□□ -1.47
SEC13YLR208W HSP78P33416 811 aa5.84□□□□□ -1.47
SEC13YLR208W MRP8P35719 219 aa5.84□□□□□ -1.47
SEC13YLR208W NUP120P35729 1037 aa5.84□□□□□ -1.47
SEC13YLR208W CAB3P36076 571 aa5.84□□□□□ -1.47
SEC13YLR208W PCF11P39081 626 aaPredicted RBP5.84□□□□□ -1.47
SEC13YLR208W AIM9P40053 627 aaKnown RBP5.84□□□□□ -1.47
SEC13YLR208W POL31P46957 487 aa5.84□□□□□ -1.47
SEC13YLR208W ENT3P47160 408 aa5.84□□□□□ -1.47
SEC13YLR208W GPG1P53130 126 aa5.84□□□□□ -1.47
SEC13YLR208W NCS2P53923 493 aaPredicted RBP5.84□□□□□ -1.47
SEC13YLR208W HER2Q03557 464 aa5.84□□□□□ -1.47
SEC13YLR208W TRS130Q03660 1102 aa5.84□□□□□ -1.47
SEC13YLR208W SNU56Q03782 492 aaKnown RBP5.84□□□□□ -1.47
SEC13YLR208W TMA46Q12000 345 aaKnown RBP5.84□□□□□ -1.47
SEC13YLR208W RPP2BP02400 110 aaKnown RBP5.83□□□□□ -1.48
SEC13YLR208W GAL80P04387 435 aa5.83□□□□□ -1.48
SEC13YLR208W GPI10P30777 616 aa5.83□□□□□ -1.48
SEC13YLR208W MCM10P32354 571 aa5.83□□□□□ -1.48
SEC13YLR208W NIC96P34077 839 aa5.83□□□□□ -1.48
SEC13YLR208W RKM3P38222 552 aa5.83□□□□□ -1.48
SEC13YLR208W GIP1P38229 639 aa5.83□□□□□ -1.48
SEC13YLR208W RPN3P40016 523 aaKnown RBP5.83□□□□□ -1.48
SEC13YLR208W IRR1P40541 1150 aa5.83□□□□□ -1.48
SEC13YLR208W EPL1P43572 832 aa5.83□□□□□ -1.48
SEC13YLR208W CNN1P43618 361 aa5.83□□□□□ -1.48
SEC13YLR208W HSV2P50079 448 aaPredicted RBP5.83□□□□□ -1.48
SEC13YLR208W TAN1P53072 289 aaPredicted RBP5.83□□□□□ -1.48
SEC13YLR208W PBP1P53297 722 aaKnown RBP5.83□□□□□ -1.48
SEC13YLR208W YNR063WP53749 607 aa5.83□□□□□ -1.48
SEC13YLR208W IMP4P53941 290 aaKnown RBP5.83□□□□□ -1.48
SEC13YLR208W GRX3Q03835 250 aa5.83□□□□□ -1.48
SEC13YLR208W DAL4Q04895 635 aa5.83□□□□□ -1.48
SEC13YLR208W MLC2Q06580 163 aa5.83□□□□□ -1.48
SEC13YLR208W BSP1Q06604 576 aa5.83□□□□□ -1.48
SEC13YLR208W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SEC13YLR208W VPS1P21576 704 aaKnown RBP5.82□□□□□ -1.48
SEC13YLR208W RAD16P31244 790 aa5.82□□□□□ -1.48
SEC13YLR208W STE5P32917 917 aa5.82□□□□□ -1.48
SEC13YLR208W STO1P34160 861 aaKnown RBP5.82□□□□□ -1.48
SEC13YLR208W ABZ1P37254 787 aaPredicted RBP5.82□□□□□ -1.48
SEC13YLR208W SDS3P40505 327 aa5.82□□□□□ -1.48
SEC13YLR208W ATP22P50273 684 aaPredicted RBP5.82□□□□□ -1.48
SEC13YLR208W UTP8P53276 713 aaKnown RBP5.82□□□□□ -1.48
SEC13YLR208W BTN2P53286 410 aa5.82□□□□□ -1.48
SEC13YLR208W SDA1P53313 767 aaKnown RBP5.82□□□□□ -1.48
SEC13YLR208W KRE33P53914 1056 aaKnown RBP5.82□□□□□ -1.48
SEC13YLR208W ISU1Q03020 165 aa5.82□□□□□ -1.48
SEC13YLR208W CWC21Q03375 135 aaKnown RBP5.82□□□□□ -1.48
SEC13YLR208W SHE9Q04172 456 aa5.82□□□□□ -1.48
SEC13YLR208W DFG5Q05031 458 aa5.82□□□□□ -1.48
SEC13YLR208W BSC2Q05611 235 aa5.82□□□□□ -1.48
SEC13YLR208W RRP9Q06506 573 aaKnown RBP5.82□□□□□ -1.48
SEC13YLR208W SHS1Q07657 551 aa5.82□□□□□ -1.48
SEC13YLR208W OSW2Q12202 724 aa5.82□□□□□ -1.48
SEC13YLR208W HRT3Q12347 344 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms