RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A RTP1Q12751 981 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A HSL1P34244 1518 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A YLR415CO13578 112 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A STE12P13574 688 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A GLK1P17709 500 aaKnown RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A SRP54P20424 541 aaKnown RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A PGS1P25578 521 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A HOG1P32485 435 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A NDC80P40460 691 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A RSC8P43609 557 aaKnown RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A BUL1P48524 976 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A ART5P53244 586 aaKnown RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A SNP1Q00916 300 aaPredicted RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A ATP25Q03153 612 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A ARR1Q06596 294 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A VAC14Q06708 880 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A THI73Q07904 523 aa1.93□□□□□ -2.1
YLR035C-AYLR035C-A RRG1Q12167 365 aaPredicted RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A CLF1Q12309 687 aaPredicted RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A PFK27Q12471 397 aaPredicted RBP1.93□□□□□ -2.1
YLR035C-AYLR035C-A ECM5Q03214 1411 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A PRE8P23639 250 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A RPC82P32349 654 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A MIC60P36112 540 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A MUM2P38236 366 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A ROK1P45818 564 aaPredicted RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A SET2P46995 733 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A BRE5P53741 515 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A TIM50Q02776 476 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A CWC21Q03375 135 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A ERV41Q04651 352 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A SLK19Q08581 821 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A APC5Q08683 685 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A THI21Q08975 551 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A DAP1Q12091 152 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A RUD3Q12234 484 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A VPS5Q92331 675 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A NOP14Q99207 810 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A TY1B-GR3Q12316 1755 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A TY1B-ORQ92393 1755 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A PMA1P05030 918 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A HCA4P20448 770 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A RPL5P26321 297 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A PSO2P30620 661 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A DPH2P32461 534 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A BYE1P36106 594 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A CCL1P37366 393 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A KTR3P38130 404 aaPredicted RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A HRB1P38922 454 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
YLR035C-AYLR035C-A UTP18P40362 594 aaPredicted RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A AIM20P40451 204 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A YJL163CP46996 555 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A YGR153WP48238 217 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A RNT1Q02555 471 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A ATG16Q03818 150 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A ARX1Q03862 593 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A RRB1Q04225 511 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A NKP1Q12493 238 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A BRR1Q99177 341 aaPredicted RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A CHD1P32657 1468 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A PYC1P11154 1178 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A DAL5P15365 543 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A CLN1P20437 546 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A ICL1P28240 557 aaPredicted RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A RAD16P31244 790 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A VPH1P32563 840 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A HSL7P38274 827 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A SRP72P38688 640 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A BCD1P38772 366 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A YIL077CP40508 320 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A HXT16P47185 567 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A ERB1Q04660 807 aaKnown RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A PSK2Q08217 1101 aa1.92□□□□□ -2.1
YLR035C-AYLR035C-A MRH1Q12117 320 aaPredicted RBP1.92□□□□□ -2.1
YLR035C-AYLR035C-A SPO14P36126 1683 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A TFC4P33339 1025 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A PIM1P36775 1133 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A RKM3P38222 552 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A BFR1P38934 470 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
YLR035C-AYLR035C-A VID27P40157 782 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A NDE1P40215 560 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A YLR352WQ06479 807 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A MDM36Q06820 579 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A CEX1Q12453 761 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A TRM11Q12463 433 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A HRP1Q99383 534 aaKnown RBP1.91□□□□□ -2.1
YLR035C-AYLR035C-A RPS21AP0C0V8 87 aaKnown RBP1.91□□□□□ -2.1
YLR035C-AYLR035C-A SEC15P22224 910 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A IMG2P25642 146 aaPredicted RBP1.91□□□□□ -2.1
YLR035C-AYLR035C-A BRF1P29056 596 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A SEC65P29478 273 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A HIR2P32480 875 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A SER1P33330 395 aaKnown RBP1.91□□□□□ -2.1
YLR035C-AYLR035C-A TIF3P34167 436 aaKnown RBP1.91□□□□□ -2.1
YLR035C-AYLR035C-A YKL100CP34248 587 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A CTF13P35203 478 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A MAL31P38156 614 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A YBR053CP38235 358 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A TCD1P38756 429 aa1.91□□□□□ -2.1
YLR035C-AYLR035C-A PPE1P38796 400 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms