RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W TY1A-JR2P47099 440 aa4.67□□□□□ -1.66
AVT1YJR001W MNP1P53163 194 aaPredicted RBP4.67□□□□□ -1.66
AVT1YJR001W GIM3P53900 129 aa4.67□□□□□ -1.66
AVT1YJR001W ERV25P54837 211 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W NOG1Q02892 647 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W TY1A-DR1Q03856 440 aa4.67□□□□□ -1.66
AVT1YJR001W HLR1Q04429 423 aa4.67□□□□□ -1.66
AVT1YJR001W TY1A-ML1Q04706 440 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W CRN1Q06440 651 aa4.67□□□□□ -1.66
AVT1YJR001W MLH2Q07980 695 aa4.67□□□□□ -1.66
AVT1YJR001W ISU2Q12056 156 aa4.67□□□□□ -1.66
AVT1YJR001W TY1A-BRQ12217 440 aa4.67□□□□□ -1.66
AVT1YJR001W PHM7Q12252 991 aa4.67□□□□□ -1.66
AVT1YJR001W YPR071WQ12346 211 aa4.67□□□□□ -1.66
AVT1YJR001W ARP7Q12406 477 aa4.67□□□□□ -1.66
AVT1YJR001W TY1A-NL2Q12470 440 aa4.67□□□□□ -1.66
AVT1YJR001W TY1A-GR2Q12485 440 aa4.67□□□□□ -1.66
AVT1YJR001W ADE8P04161 214 aa4.67□□□□□ -1.66
AVT1YJR001W STE6P12866 1290 aa4.67□□□□□ -1.66
AVT1YJR001W YKL107WP34251 309 aa4.67□□□□□ -1.66
AVT1YJR001W TEF4P36008 412 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W ECM4P36156 370 aa4.67□□□□□ -1.66
AVT1YJR001W SMC2P38989 1170 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W HXT6P39003 570 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W HXT7P39004 570 aa4.67□□□□□ -1.66
AVT1YJR001W PAC1P39946 494 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W YRB1P41920 201 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W HXT10P43581 546 aa4.67□□□□□ -1.66
AVT1YJR001W UBP2Q01476 1272 aa4.67□□□□□ -1.66
AVT1YJR001W ROD1Q02805 837 aa4.67□□□□□ -1.66
AVT1YJR001W YCG1Q06680 1035 aa4.67□□□□□ -1.66
AVT1YJR001W KEL3Q08979 651 aaPredicted RBP4.67□□□□□ -1.66
AVT1YJR001W PAR32Q12515 295 aaKnown RBP4.67□□□□□ -1.66
AVT1YJR001W RPS21AP0C0V8 87 aaKnown RBP4.66□□□□□ -1.66
AVT1YJR001W RSC6P25632 483 aa4.66□□□□□ -1.66
AVT1YJR001W RPN2P32565 945 aaKnown RBP4.66□□□□□ -1.66
AVT1YJR001W BMH2P34730 273 aaKnown RBP4.66□□□□□ -1.66
AVT1YJR001W HSL7P38274 827 aa4.66□□□□□ -1.66
AVT1YJR001W YSW1P38280 609 aa4.66□□□□□ -1.66
AVT1YJR001W REI1P38344 393 aaPredicted RBP4.66□□□□□ -1.66
AVT1YJR001W RFC1P38630 861 aaKnown RBP4.66□□□□□ -1.66
AVT1YJR001W YHB1P39676 399 aaKnown RBP4.66□□□□□ -1.66
AVT1YJR001W SEC28P40509 296 aaKnown RBP4.66□□□□□ -1.66
AVT1YJR001W CIR1P42940 261 aa4.66□□□□□ -1.66
AVT1YJR001W PEX25Q02969 394 aa4.66□□□□□ -1.66
AVT1YJR001W ISU1Q03020 165 aa4.66□□□□□ -1.66
AVT1YJR001W RRP17Q04031 235 aaPredicted RBP4.66□□□□□ -1.66
AVT1YJR001W DPB4Q04603 196 aaKnown RBP4.66□□□□□ -1.66
AVT1YJR001W MFB1Q04922 465 aa4.66□□□□□ -1.66
AVT1YJR001W TFC6Q06339 672 aa4.66□□□□□ -1.66
AVT1YJR001W APL4Q12028 832 aa4.66□□□□□ -1.66
AVT1YJR001W YPR027CQ12079 277 aa4.66□□□□□ -1.66
AVT1YJR001W SFI1Q12369 946 aa4.66□□□□□ -1.66
AVT1YJR001W CPA2P03965 1118 aaKnown RBP4.65□□□□□ -1.66
AVT1YJR001W MET17P06106 444 aa4.65□□□□□ -1.66
AVT1YJR001W MTF2P10849 440 aa4.65□□□□□ -1.66
AVT1YJR001W ENA1P13587 1091 aa4.65□□□□□ -1.66
AVT1YJR001W GUK1P15454 187 aaKnown RBP4.65□□□□□ -1.66
AVT1YJR001W THR1P17423 357 aaKnown RBP4.65□□□□□ -1.66
AVT1YJR001W MIH1P23748 554 aa4.65□□□□□ -1.66
AVT1YJR001W SED4P25365 1065 aa4.65□□□□□ -1.66
AVT1YJR001W POT1P27796 417 aaKnown RBP RIP-Chip data4.65□□□□□ -1.66not detected
AVT1YJR001W APD1P38281 316 aa4.65□□□□□ -1.66
AVT1YJR001W MTW1P39731 289 aa4.65□□□□□ -1.66
AVT1YJR001W NUP85P46673 744 aa4.65□□□□□ -1.66
AVT1YJR001W GCD14P46959 383 aaPredicted RBP4.65□□□□□ -1.66
AVT1YJR001W ASK10P48361 1146 aa4.65□□□□□ -1.66
AVT1YJR001W INP52P50942 1183 aa4.65□□□□□ -1.66
AVT1YJR001W FOL2P51601 243 aaKnown RBP4.65□□□□□ -1.66
AVT1YJR001W PEX13P80667 386 aa4.65□□□□□ -1.66
AVT1YJR001W ENA2Q01896 1091 aa4.65□□□□□ -1.66
AVT1YJR001W ELP4Q02884 456 aaKnown RBP4.65□□□□□ -1.66
AVT1YJR001W VID22Q05934 901 aa4.65□□□□□ -1.66
AVT1YJR001W MCP2Q06567 569 aa4.65□□□□□ -1.66
AVT1YJR001W RSC3Q06639 885 aa4.65□□□□□ -1.66
AVT1YJR001W TRM8Q12009 286 aa4.65□□□□□ -1.66
AVT1YJR001W ENA5Q12691 1091 aa4.65□□□□□ -1.66
AVT1YJR001W MHP1P43638 1398 aa4.65□□□□□ -1.66
AVT1YJR001W RPS3P05750 240 aaKnown RBP4.65□□□□□ -1.67
AVT1YJR001W HOM2P13663 365 aaKnown RBP4.65□□□□□ -1.67
AVT1YJR001W OM45P16547 393 aa4.65□□□□□ -1.67
AVT1YJR001W PFK2P16862 959 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
AVT1YJR001W OLE1P21147 510 aaKnown RBP4.65□□□□□ -1.67
AVT1YJR001W PWP1P21304 576 aaKnown RBP4.65□□□□□ -1.67
AVT1YJR001W CLB1P24868 471 aa4.65□□□□□ -1.67
AVT1YJR001W RRP7P25368 297 aaPredicted RBP4.65□□□□□ -1.67
AVT1YJR001W ASF2P32448 525 aaPredicted RBP4.65□□□□□ -1.67
AVT1YJR001W HOG1P32485 435 aa4.65□□□□□ -1.67
AVT1YJR001W MAK5P38112 773 aaPredicted RBP4.65□□□□□ -1.67
AVT1YJR001W TIF11P38912 153 aaKnown RBP4.65□□□□□ -1.67
AVT1YJR001W SIP5P40210 489 aaKnown RBP4.65□□□□□ -1.67
AVT1YJR001W KHA1P40309 873 aa4.65□□□□□ -1.67
AVT1YJR001W QDR2P40474 542 aa4.65□□□□□ -1.67
AVT1YJR001W TAD1P53065 400 aa4.65□□□□□ -1.67
AVT1YJR001W CBK1P53894 756 aa4.65□□□□□ -1.67
AVT1YJR001W NOP15P53927 220 aaPredicted RBP4.65□□□□□ -1.67
AVT1YJR001W ARP5P53946 755 aa4.65□□□□□ -1.67
AVT1YJR001W MRPL13Q02204 264 aa4.65□□□□□ -1.67
AVT1YJR001W RNT1Q02555 471 aa4.65□□□□□ -1.67
AVT1YJR001W RRN5Q02983 363 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms