RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI3	YJL176C	SPG3	Q04398	127 aa	Predicted RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	AIM32	Q04689	311 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	SOV1	Q04748	898 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	SIL1	Q08199	421 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	ARP7	Q12406	477 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	CCP1	P00431	361 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	PPH22	P23595	377 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	POL12	P38121	705 aa	Predicted RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	MCX1	P38323	520 aa	Predicted RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	HIS2	P38635	335 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	TCD1	P38756	429 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	YIL161W	P40449	235 aa	Known RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	PRK1	P40494	810 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	EFM4	P40516	257 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	COP1	P53622	1201 aa	Known RBP	4.86	□□□□□ -1.63
SWI3	YJL176C	YNL108C	P53929	270 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	PMT7	Q06644	662 aa		4.86	□□□□□ -1.63
SWI3	YJL176C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SWI3	YJL176C	ERG11	P10614	530 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	PSE1	P32337	1089 aa	Known RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	SRB4	P32569	687 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	ATG12	P38316	186 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	SWC5	P38326	303 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	PMC1	P38929	1173 aa	Predicted RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	CAJ1	P39101	391 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	SEC9	P40357	651 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	TMA108	P40462	946 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	UFE1	P41834	346 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	KAP114	P53067	1004 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	PEX31	P53203	462 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	YGR283C	P53336	341 aa	Predicted RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	RKM2	Q03942	479 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	IVY1	Q04934	453 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	YLR001C	Q07895	862 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	SVS1	Q12254	260 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	LPX1	Q12405	387 aa	Known RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	PDH1	Q12428	516 aa	Known RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	YPK1	P12688	680 aa	Known RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	SGF29	P25554	259 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	STO1	P34160	861 aa	Known RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	YKL097C	P34245	136 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	RRT2	P38332	387 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	ASG1	P40467	964 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	YIL054W	P40524	105 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	TUB4	P53378	473 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	YNL247W	P53852	767 aa	Known RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	TOF2	Q02208	771 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	ELP3	Q02908	557 aa	Known RBP	4.85	□□□□□ -1.63
SWI3	YJL176C	YDL073W	Q07454	984 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	AAD4	Q07747	329 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	LCB4	Q12246	624 aa		4.85	□□□□□ -1.63
SWI3	YJL176C	ENO2	P00925	437 aa	Known RBP	4.84	□□□□□ -1.63
SWI3	YJL176C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SWI3	YJL176C	PDR1	P12383	1068 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	CKI1	P20485	582 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	SIR1	P21691	654 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	TRX1	P22217	103 aa	Known RBP	4.84	□□□□□ -1.63
SWI3	YJL176C	YJR079W	P47126	109 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	APT1	P49435	187 aa	Known RBP	4.84	□□□□□ -1.63
SWI3	YJL176C	BTN2	P53286	410 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	PIR3	Q03180	325 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	TMN2	Q04562	672 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	IRC10	Q08118	586 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	THI21	Q08975	551 aa		4.84	□□□□□ -1.63
SWI3	YJL176C	YIH1	P25637	258 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	PTC3	P34221	468 aa	Known RBP	4.84	□□□□□ -1.64
SWI3	YJL176C	RCK2	P38623	610 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	KHA1	P40309	873 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	RTT101	P47050	842 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
SWI3	YJL176C	BRO1	P48582	844 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	YNL144C	P53907	740 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	SFB2	P53953	876 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	KTR6	P54070	446 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	CDC55	Q00362	526 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	DIG1	Q03063	452 aa	Known RBP	4.84	□□□□□ -1.64
SWI3	YJL176C	SND1	Q04007	877 aa		4.84	□□□□□ -1.64
SWI3	YJL176C	RPS9A	O13516	197 aa	Known RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	PET123	P17558	318 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	SGE1	P33335	543 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	YBL055C	P34220	418 aa	Predicted RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	DSF2	P38213	736 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	GGA2	P38817	585 aa	Known RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	NMD3	P38861	518 aa	Known RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	PRM9	P39551	298 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	CHS6	P40955	746 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	GYP8	P43570	497 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	YNL040W	P53960	456 aa	Predicted RBP	4.83	□□□□□ -1.64
SWI3	YJL176C	YHM2	Q04013	314 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	SEG1	Q04279	960 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	UFO1	Q04511	668 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	VAC14	Q06708	880 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	YLR462W	O13556	202 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	HIS5	P07172	385 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	PMS1	P14242	873 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	YHL049C	P38722	271 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	MED6	P38782	295 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	LAM1	P38851	1228 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	ERP2	P39704	215 aa		4.83	□□□□□ -1.64
SWI3	YJL176C	YFL064C	P43540	174 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms