RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W PRR1P28708 518 aa6.97□□□□□ -1.29
MSP1YGR028W YSC83P32792 385 aa6.97□□□□□ -1.29
MSP1YGR028W SKG6P32900 734 aaPredicted RBP6.97□□□□□ -1.29
MSP1YGR028W YEL1P34225 687 aa6.97□□□□□ -1.29
MSP1YGR028W MRX3P38172 270 aa6.97□□□□□ -1.29
MSP1YGR028W FKS1P38631 1876 aaKnown RBP6.97□□□□□ -1.29
MSP1YGR028W YER186CP40101 306 aa6.97□□□□□ -1.29
MSP1YGR028W THI6P41835 540 aa6.97□□□□□ -1.29
MSP1YGR028W PEX14P53112 341 aa6.97□□□□□ -1.29
MSP1YGR028W HXT15P54854 567 aa6.97□□□□□ -1.29
MSP1YGR028W VTC3Q02725 835 aa6.97□□□□□ -1.29
MSP1YGR028W CWC21Q03375 135 aaKnown RBP6.97□□□□□ -1.29
MSP1YGR028W PIG1Q06216 648 aa6.97□□□□□ -1.29
MSP1YGR028W YVC1Q12324 675 aa6.97□□□□□ -1.29
MSP1YGR028W CDC34P14682 295 aa6.96□□□□□ -1.3
MSP1YGR028W DAL7P21826 554 aa6.96□□□□□ -1.3
MSP1YGR028W CDC15P27636 974 aa6.96□□□□□ -1.3
MSP1YGR028W MKK2P32491 506 aa6.96□□□□□ -1.3
MSP1YGR028W PUB1P32588 453 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
MSP1YGR028W YKR073CP36153 106 aa6.96□□□□□ -1.3
MSP1YGR028W ALG11P53954 548 aaKnown RBP6.96□□□□□ -1.3
MSP1YGR028W EEB1Q02891 456 aa6.96□□□□□ -1.3
MSP1YGR028W ECM7Q06200 448 aa6.96□□□□□ -1.3
MSP1YGR028W YPL216WQ08964 1102 aa6.96□□□□□ -1.3
MSP1YGR028W OSH2Q12451 1283 aa6.96□□□□□ -1.3
MSP1YGR028W FOB1O13329 566 aa6.95□□□□□ -1.3
MSP1YGR028W SNF1P06782 633 aaKnown RBP6.95□□□□□ -1.3
MSP1YGR028W BIK1P11709 440 aa6.95□□□□□ -1.3
MSP1YGR028W MCM3P24279 971 aaKnown RBP6.95□□□□□ -1.3
MSP1YGR028W SYP1P25623 870 aaKnown RBP6.95□□□□□ -1.3
MSP1YGR028W PPZ1P26570 692 aa6.95□□□□□ -1.3
MSP1YGR028W MNN4P36044 1178 aa6.95□□□□□ -1.3
MSP1YGR028W UBP13P38187 747 aa6.95□□□□□ -1.3
MSP1YGR028W SCD6P45978 349 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
MSP1YGR028W RCR2Q03446 210 aaKnown RBP6.95□□□□□ -1.3
MSP1YGR028W MRI1Q06489 411 aaKnown RBP6.95□□□□□ -1.3
MSP1YGR028W DNL4Q08387 944 aaPredicted RBP6.95□□□□□ -1.3
MSP1YGR028W SGO1Q08490 590 aa6.95□□□□□ -1.3
MSP1YGR028W TRE1Q08919 783 aa6.95□□□□□ -1.3
MSP1YGR028W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
MSP1YGR028W YPL277CQ08989 487 aa6.95□□□□□ -1.3
MSP1YGR028W GLT1Q12680 2145 aaKnown RBP6.95□□□□□ -1.3
MSP1YGR028W RIF1P29539 1916 aa6.95□□□□□ -1.3
MSP1YGR028W PCK1P10963 549 aa6.94□□□□□ -1.3
MSP1YGR028W ALG3P38179 458 aa6.94□□□□□ -1.3
MSP1YGR028W RGD1P38339 666 aa6.94□□□□□ -1.3
MSP1YGR028W MMF1P40185 145 aaKnown RBP6.94□□□□□ -1.3
MSP1YGR028W ASN1P49089 572 aaKnown RBP6.94□□□□□ -1.3
MSP1YGR028W NBP1P52919 319 aaPredicted RBP6.94□□□□□ -1.3
MSP1YGR028W UTP14Q04500 899 aaKnown RBP6.94□□□□□ -1.3
MSP1YGR028W MMS4P38257 691 aa6.93□□□□□ -1.3
MSP1YGR028W MAD1P40957 749 aa6.93□□□□□ -1.3
MSP1YGR028W VTC2P43585 828 aa6.93□□□□□ -1.3
MSP1YGR028W CNN1P43618 361 aa6.93□□□□□ -1.3
MSP1YGR028W SPC98P53540 846 aa6.93□□□□□ -1.3
MSP1YGR028W SNU56Q03782 492 aaKnown RBP6.93□□□□□ -1.3
MSP1YGR028W BRE4Q07660 1125 aa6.93□□□□□ -1.3
MSP1YGR028W PLP2Q12017 286 aa6.93□□□□□ -1.3
MSP1YGR028W HAP2P06774 265 aa6.92□□□□□ -1.3
MSP1YGR028W SPE1P08432 466 aa6.92□□□□□ -1.3
MSP1YGR028W PHO8P11491 566 aa6.92□□□□□ -1.3
MSP1YGR028W LIP5P32875 414 aa6.92□□□□□ -1.3
MSP1YGR028W TRM2P33753 639 aa6.92□□□□□ -1.3
MSP1YGR028W YHL012WP38709 493 aa6.92□□□□□ -1.3
MSP1YGR028W MOB1P40484 314 aa6.92□□□□□ -1.3
MSP1YGR028W CCM1P48237 864 aaPredicted RBP6.92□□□□□ -1.3
MSP1YGR028W HSH155P49955 971 aaKnown RBP6.92□□□□□ -1.3
MSP1YGR028W CUE3P53137 624 aaKnown RBP6.92□□□□□ -1.3
MSP1YGR028W SEC5P89102 971 aa6.92□□□□□ -1.3
MSP1YGR028W TLG2Q08144 397 aa6.92□□□□□ -1.3
MSP1YGR028W PIN2Q12057 282 aa6.92□□□□□ -1.3
MSP1YGR028W MAS1P10507 462 aa6.91□□□□□ -1.3
MSP1YGR028W APE1P14904 514 aa6.91□□□□□ -1.3
MSP1YGR028W BET2P20133 325 aa6.91□□□□□ -1.3
MSP1YGR028W SPO11P23179 398 aa6.91□□□□□ -1.3
MSP1YGR028W KIP1P28742 1111 aa6.91□□□□□ -1.3
MSP1YGR028W BMH1P29311 267 aaKnown RBP6.91□□□□□ -1.3
MSP1YGR028W DUT1P33317 147 aa6.91□□□□□ -1.3
MSP1YGR028W PEX7P39108 375 aa6.91□□□□□ -1.3
MSP1YGR028W YJL045WP47052 634 aa6.91□□□□□ -1.3
MSP1YGR028W SHE10P53075 577 aa6.91□□□□□ -1.3
MSP1YGR028W HRQ1Q05549 1077 aa6.91□□□□□ -1.3
MSP1YGR028W CUR1Q06469 252 aa6.91□□□□□ -1.3
MSP1YGR028W CDD1Q06549 142 aa6.91□□□□□ -1.3
MSP1YGR028W CDC53Q12018 815 aaKnown RBP6.91□□□□□ -1.3
MSP1YGR028W RRD2Q12461 358 aa6.91□□□□□ -1.3
MSP1YGR028W GCD1P09032 578 aaPredicted RBP6.9□□□□□ -1.3
MSP1YGR028W ASP3-2P0CX77 362 aa6.9□□□□□ -1.3
MSP1YGR028W ASP3-3P0CX78 362 aa6.9□□□□□ -1.3
MSP1YGR028W ASP3-4P0CX79 362 aa6.9□□□□□ -1.3
MSP1YGR028W ASP3-1P0CZ17 362 aa6.9□□□□□ -1.3
MSP1YGR028W PDE1P22434 369 aa6.9□□□□□ -1.3
MSP1YGR028W HIR1P32479 840 aa6.9□□□□□ -1.3
MSP1YGR028W LYP1P32487 611 aa6.9□□□□□ -1.3
MSP1YGR028W MUD1P32605 298 aaKnown RBP6.9□□□□□ -1.3
MSP1YGR028W YSC84P32793 468 aa6.9□□□□□ -1.3
MSP1YGR028W YKL097CP34245 136 aa6.9□□□□□ -1.3
MSP1YGR028W SNF7P39929 240 aaKnown RBP6.9□□□□□ -1.3
MSP1YGR028W YTA12P40341 825 aa6.9□□□□□ -1.3
MSP1YGR028W HUL4P40985 892 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms