RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C ESC1Q03661 1658 aaKnown RBP3.49□□□□□ -1.85
MSH4YFL003C MPE1P35728 441 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C SET3P36124 751 aa3.48□□□□□ -1.85
MSH4YFL003C AIM3P38266 947 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C FOL2P51601 243 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C MEP3P53390 489 aa3.48□□□□□ -1.85
MSH4YFL003C MCH5Q08777 521 aa3.48□□□□□ -1.85
MSH4YFL003C SOD2P00447 233 aa3.48□□□□□ -1.85
MSH4YFL003C SNF1P06782 633 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C TUP1P16649 713 aa3.48□□□□□ -1.85
MSH4YFL003C MCM3P24279 971 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C SWI4P25302 1093 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C MCM10P32354 571 aa3.48□□□□□ -1.85
MSH4YFL003C RPN12P32496 274 aa3.48□□□□□ -1.85
MSH4YFL003C MFT1P33441 392 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C APM3P38153 483 aa3.48□□□□□ -1.85
MSH4YFL003C IFA38P38286 347 aa3.48□□□□□ -1.85
MSH4YFL003C LSB3P43603 459 aaKnown RBP3.48□□□□□ -1.85
MSH4YFL003C GIR2Q03768 265 aaPredicted RBP3.48□□□□□ -1.85
MSH4YFL003C CDC25P04821 1589 aa3.48□□□□□ -1.85
MSH4YFL003C DGR2P32330 852 aa3.47□□□□□ -1.85
MSH4YFL003C GTR1Q00582 310 aa3.47□□□□□ -1.85
MSH4YFL003C YDR056CQ12025 205 aa3.47□□□□□ -1.85
MSH4YFL003C MTF2P10849 440 aa3.47□□□□□ -1.85
MSH4YFL003C HMG2P12684 1045 aa3.47□□□□□ -1.85
MSH4YFL003C PRE10P21242 288 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
MSH4YFL003C PEX1P24004 1043 aa3.47□□□□□ -1.85
MSH4YFL003C DCG1P32460 244 aa3.47□□□□□ -1.85
MSH4YFL003C MRS6P32864 603 aaKnown RBP3.47□□□□□ -1.85
MSH4YFL003C YKR075CP36155 307 aa3.47□□□□□ -1.85
MSH4YFL003C AIM21P40563 679 aa3.47□□□□□ -1.85
MSH4YFL003C FKH2P41813 862 aa3.47□□□□□ -1.85
MSH4YFL003C POL31P46957 487 aa3.47□□□□□ -1.85
MSH4YFL003C PSR2Q07949 397 aa3.47□□□□□ -1.85
MSH4YFL003C NEW1Q08972 1196 aaKnown RBP3.47□□□□□ -1.85
MSH4YFL003C ICL2Q12031 575 aa3.47□□□□□ -1.85
MSH4YFL003C PSF3Q12146 194 aa3.47□□□□□ -1.85
MSH4YFL003C POM34Q12445 299 aa3.47□□□□□ -1.85
MSH4YFL003C TRP4P07285 380 aaPredicted RBP3.46□□□□□ -1.86
MSH4YFL003C CWH43P25618 953 aa3.46□□□□□ -1.86
MSH4YFL003C YHR033WP38690 423 aa3.46□□□□□ -1.86
MSH4YFL003C PXA1P41909 870 aa3.46□□□□□ -1.86
MSH4YFL003C UPF3P48412 387 aaKnown RBP3.46□□□□□ -1.86
MSH4YFL003C HOL1P53389 586 aa3.46□□□□□ -1.86
MSH4YFL003C RRI2Q12348 645 aa3.46□□□□□ -1.86
MSH4YFL003C ATG11Q12527 1178 aa3.46□□□□□ -1.86
MSH4YFL003C VPS5Q92331 675 aa3.46□□□□□ -1.86
MSH4YFL003C YCL049CP25577 312 aa3.46□□□□□ -1.86
MSH4YFL003C BCS1P32839 456 aa3.46□□□□□ -1.86
MSH4YFL003C PTH2P34222 208 aa3.46□□□□□ -1.86
MSH4YFL003C PAP2P53632 584 aaKnown RBP3.46□□□□□ -1.86
MSH4YFL003C ESF2P53743 316 aaKnown RBP3.46□□□□□ -1.86
MSH4YFL003C ENT2Q05785 613 aa3.46□□□□□ -1.86
MSH4YFL003C ADE3P07245 946 aaKnown RBP3.45□□□□□ -1.86
MSH4YFL003C PRP6P19735 899 aaPredicted RBP3.45□□□□□ -1.86
MSH4YFL003C SIR1P21691 654 aa3.45□□□□□ -1.86
MSH4YFL003C PRP45P28004 379 aaPredicted RBP3.45□□□□□ -1.86
MSH4YFL003C LIP5P32875 414 aa3.45□□□□□ -1.86
MSH4YFL003C GEX2P36173 615 aa3.45□□□□□ -1.86
MSH4YFL003C AXL2P38928 823 aa3.45□□□□□ -1.86
MSH4YFL003C NUP60P39705 539 aa3.45□□□□□ -1.86
MSH4YFL003C RFX1P48743 811 aa3.45□□□□□ -1.86
MSH4YFL003C SPT20P50875 604 aa3.45□□□□□ -1.86
MSH4YFL003C NRG1Q03125 231 aa3.45□□□□□ -1.86
MSH4YFL003C YFT2Q06676 274 aa3.45□□□□□ -1.86
MSH4YFL003C PCD1Q12524 340 aa3.45□□□□□ -1.86
MSH4YFL003C YCR015CP25616 317 aa3.45□□□□□ -1.86
MSH4YFL003C FEN2P25621 512 aaKnown RBP3.45□□□□□ -1.86
MSH4YFL003C MSH1P25846 959 aa3.45□□□□□ -1.86
MSH4YFL003C OMA1P36163 345 aa3.45□□□□□ -1.86
MSH4YFL003C GSM1P42950 618 aa3.45□□□□□ -1.86
MSH4YFL003C LAT1P12695 482 aaKnown RBP3.44□□□□□ -1.86
MSH4YFL003C STB5P38699 743 aa3.44□□□□□ -1.86
MSH4YFL003C BCD1P38772 366 aa3.44□□□□□ -1.86
MSH4YFL003C YBP2P53169 641 aa3.44□□□□□ -1.86
MSH4YFL003C VBA4Q04602 768 aaKnown RBP3.44□□□□□ -1.86
MSH4YFL003C YCG1Q06680 1035 aa3.44□□□□□ -1.86
MSH4YFL003C AAD4Q07747 329 aa3.44□□□□□ -1.86
MSH4YFL003C ENB1Q08299 606 aa3.44□□□□□ -1.86
MSH4YFL003C MLH3Q12083 715 aa3.44□□□□□ -1.86
MSH4YFL003C POL3P15436 1097 aa3.44□□□□□ -1.86
MSH4YFL003C GUK1P15454 187 aaKnown RBP3.44□□□□□ -1.86
MSH4YFL003C SSH4P32343 579 aa3.44□□□□□ -1.86
MSH4YFL003C COS111P38308 924 aa3.44□□□□□ -1.86
MSH4YFL003C SSP120P39931 234 aaKnown RBP3.44□□□□□ -1.86
MSH4YFL003C DPH1P40487 425 aaKnown RBP3.44□□□□□ -1.86
MSH4YFL003C TAH11P47112 604 aa3.44□□□□□ -1.86
MSH4YFL003C MUP1P50276 574 aa3.44□□□□□ -1.86
MSH4YFL003C PHO23P50947 330 aa3.44□□□□□ -1.86
MSH4YFL003C UBA2P52488 636 aa3.44□□□□□ -1.86
MSH4YFL003C UBC11P52492 156 aa3.44□□□□□ -1.86
MSH4YFL003C COS12P53053 380 aa3.44□□□□□ -1.86
MSH4YFL003C YKU80Q04437 629 aa3.44□□□□□ -1.86
MSH4YFL003C TRI1Q05024 226 aa3.44□□□□□ -1.86
MSH4YFL003C TMA10Q06177 86 aa3.44□□□□□ -1.86
MSH4YFL003C IWR1Q07532 353 aaPredicted RBP3.44□□□□□ -1.86
MSH4YFL003C SIR3P06701 978 aa3.43□□□□□ -1.86
MSH4YFL003C RNQ1P25367 405 aa3.43□□□□□ -1.86
MSH4YFL003C TOD6P34219 525 aa3.43□□□□□ -1.86
MSH4YFL003C SAW1P39735 261 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms