RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	RPT2	P40327	437 aa	Known RBP	9.28	□□□□□ -0.92
LSM5	YER146W	PFD1	P46988	109 aa		9.28	□□□□□ -0.92
LSM5	YER146W	HLJ1	P48353	224 aa		9.28	□□□□□ -0.92
LSM5	YER146W	YML6	P51998	286 aa		9.28	□□□□□ -0.92
LSM5	YER146W	YNL040W	P53960	456 aa	Predicted RBP	9.28	□□□□□ -0.92
LSM5	YER146W	GPM2	Q12008	311 aa		9.28	□□□□□ -0.92
LSM5	YER146W	YRR1	Q12172	810 aa		9.28	□□□□□ -0.92
LSM5	YER146W	TAO3	P40468	2376 aa		9.28	□□□□□ -0.92
LSM5	YER146W	VPH1	P32563	840 aa	Known RBP	9.27	□□□□□ -0.93
LSM5	YER146W	ECM2	P38241	364 aa	Known RBP	9.27	□□□□□ -0.93
LSM5	YER146W	YMR102C	Q03177	834 aa		9.27	□□□□□ -0.93
LSM5	YER146W	PIB1	Q06651	286 aa		9.27	□□□□□ -0.93
LSM5	YER146W	FMP25	Q08023	583 aa		9.27	□□□□□ -0.93
LSM5	YER146W	RCL1	Q08096	367 aa	Predicted RBP	9.27	□□□□□ -0.93
LSM5	YER146W	AVL9	Q12500	764 aa		9.27	□□□□□ -0.93
LSM5	YER146W	APM4	Q99186	491 aa		9.27	□□□□□ -0.93
LSM5	YER146W	CAD1	P24813	409 aa	Known RBP	9.26	□□□□□ -0.93
LSM5	YER146W	LRE1	P25579	583 aa	Known RBP	9.26	□□□□□ -0.93
LSM5	YER146W	YME1	P32795	747 aa		9.26	□□□□□ -0.93
LSM5	YER146W	CCL1	P37366	393 aa		9.26	□□□□□ -0.93
LSM5	YER146W	VHC1	P38329	1120 aa		9.26	□□□□□ -0.93
LSM5	YER146W	XDJ1	P39102	459 aa		9.26	□□□□□ -0.93
LSM5	YER146W	FHL1	P39521	936 aa		9.26	□□□□□ -0.93
LSM5	YER146W	KHA1	P40309	873 aa		9.26	□□□□□ -0.93
LSM5	YER146W	PRK1	P40494	810 aa		9.26	□□□□□ -0.93
LSM5	YER146W	CTK3	P46963	296 aa	Predicted RBP	9.26	□□□□□ -0.93
LSM5	YER146W	ADA2	Q02336	434 aa		9.26	□□□□□ -0.93
LSM5	YER146W	SPP1	Q03012	353 aa		9.26	□□□□□ -0.93
LSM5	YER146W	STE23	Q06010	1027 aa		9.26	□□□□□ -0.93
LSM5	YER146W	ATP1	P07251	545 aa	Known RBP	9.25	□□□□□ -0.93
LSM5	YER146W	GCR1	P07261	785 aa		9.25	□□□□□ -0.93
LSM5	YER146W	CIT2	P08679	460 aa		9.25	□□□□□ -0.93
LSM5	YER146W	ADH4	P10127	382 aa		9.25	□□□□□ -0.93
LSM5	YER146W	PYC1	P11154	1178 aa	Known RBP	9.25	□□□□□ -0.93
LSM5	YER146W	YCR015C	P25616	317 aa		9.25	□□□□□ -0.93
LSM5	YER146W	ADK2	P26364	225 aa		9.25	□□□□□ -0.93
LSM5	YER146W	MEI4	P29467	408 aa		9.25	□□□□□ -0.93
LSM5	YER146W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	9.25	□□□□□ -0.93	not detected
LSM5	YER146W	APN2	P38207	520 aa		9.25	□□□□□ -0.93
LSM5	YER146W	RFS1	P38234	210 aa	Known RBP	9.25	□□□□□ -0.93
LSM5	YER146W	YBR053C	P38235	358 aa		9.25	□□□□□ -0.93
LSM5	YER146W	INA22	P40576	216 aa		9.25	□□□□□ -0.93
LSM5	YER146W	SAP185	P40856	1058 aa		9.25	□□□□□ -0.93
LSM5	YER146W	YFL052W	P43551	465 aa		9.25	□□□□□ -0.93
LSM5	YER146W	YGR283C	P53336	341 aa	Predicted RBP	9.25	□□□□□ -0.93
LSM5	YER146W	ELP3	Q02908	557 aa	Known RBP	9.25	□□□□□ -0.93
LSM5	YER146W	AIM32	Q04689	311 aa		9.25	□□□□□ -0.93
LSM5	YER146W	YDL073W	Q07454	984 aa		9.25	□□□□□ -0.93
LSM5	YER146W	TAF10	Q12030	206 aa		9.25	□□□□□ -0.93
LSM5	YER146W	SLY1	P22213	666 aa		9.24	□□□□□ -0.93
LSM5	YER146W	ECM32	P32644	1121 aa	Known RBP	9.24	□□□□□ -0.93
LSM5	YER146W	HSL7	P38274	827 aa		9.24	□□□□□ -0.93
LSM5	YER146W	POP4	P38336	279 aa		9.24	□□□□□ -0.93
LSM5	YER146W	FLC2	P39719	783 aa		9.24	□□□□□ -0.93
LSM5	YER146W	AVT2	P39981	480 aa		9.24	□□□□□ -0.93
LSM5	YER146W	SMX2	P40204	77 aa	Known RBP	9.24	□□□□□ -0.93
LSM5	YER146W	PXA1	P41909	870 aa		9.24	□□□□□ -0.93
LSM5	YER146W	BFA1	P47113	574 aa		9.24	□□□□□ -0.93
LSM5	YER146W	PEX31	P53203	462 aa		9.24	□□□□□ -0.93
LSM5	YER146W	PRM6	Q04705	352 aa		9.24	□□□□□ -0.93
LSM5	YER146W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	9.24	□□□□□ -0.93	not detected
LSM5	YER146W	THI21	Q08975	551 aa		9.24	□□□□□ -0.93
LSM5	YER146W	ACM1	Q08981	209 aa		9.24	□□□□□ -0.93
LSM5	YER146W	FAP7	Q12055	197 aa	Predicted RBP	9.24	□□□□□ -0.93
LSM5	YER146W	NBP2	Q12163	236 aa		9.24	□□□□□ -0.93
LSM5	YER146W	IZH4	Q99393	312 aa		9.24	□□□□□ -0.93
LSM5	YER146W	HEM15	P16622	393 aa		9.23	□□□□□ -0.93
LSM5	YER146W	CBF1	P17106	351 aa		9.23	□□□□□ -0.93
LSM5	YER146W	PAM1	P37304	830 aa	Known RBP	9.23	□□□□□ -0.93
LSM5	YER146W	NMD3	P38861	518 aa	Known RBP	9.23	□□□□□ -0.93
LSM5	YER146W	TGL3	P40308	642 aa		9.23	□□□□□ -0.93
LSM5	YER146W	TAF1	P46677	1066 aa		9.23	□□□□□ -0.93
LSM5	YER146W	SFH1	Q06168	426 aa		9.23	□□□□□ -0.93
LSM5	YER146W	FRA1	Q07825	749 aa		9.23	□□□□□ -0.93
LSM5	YER146W	THI20	Q08224	551 aa		9.23	□□□□□ -0.93
LSM5	YER146W	SPO16	P17122	198 aa		9.22	□□□□□ -0.93
LSM5	YER146W	RGR1	P19263	1082 aa		9.22	□□□□□ -0.93
LSM5	YER146W	DUG2	P38149	878 aa		9.22	□□□□□ -0.93
LSM5	YER146W	STB5	P38699	743 aa		9.22	□□□□□ -0.93
LSM5	YER146W	AIM18	P38884	321 aa		9.22	□□□□□ -0.93
LSM5	YER146W	MND2	P40577	368 aa		9.22	□□□□□ -0.93
LSM5	YER146W	RGD2	P43556	714 aa		9.22	□□□□□ -0.93
LSM5	YER146W	SAE2	P46946	345 aa		9.22	□□□□□ -0.93
LSM5	YER146W	YJR079W	P47126	109 aa		9.22	□□□□□ -0.93
LSM5	YER146W	RFX1	P48743	811 aa		9.22	□□□□□ -0.93
LSM5	YER146W	NUT1	P53114	1132 aa		9.22	□□□□□ -0.93
LSM5	YER146W	SND1	Q04007	877 aa		9.22	□□□□□ -0.93
LSM5	YER146W	CDC73	Q06697	393 aa		9.22	□□□□□ -0.93
LSM5	YER146W	TPO1	Q07824	586 aa		9.22	□□□□□ -0.93
LSM5	YER146W	YOR223W	Q12015	292 aa		9.22	□□□□□ -0.93
LSM5	YER146W	SEY1	Q99287	776 aa		9.22	□□□□□ -0.93
LSM5	YER146W	YLR422W	Q06409	1932 aa		9.21	□□□□□ -0.93
LSM5	YER146W	CCP1	P00431	361 aa		9.21	□□□□□ -0.94
LSM5	YER146W	RAD1	P06777	1100 aa		9.21	□□□□□ -0.94
LSM5	YER146W	GPI10	P30777	616 aa		9.21	□□□□□ -0.94
LSM5	YER146W	TPS2	P31688	896 aa	Known RBP	9.21	□□□□□ -0.94
LSM5	YER146W	DSS4	P32601	143 aa		9.21	□□□□□ -0.94
LSM5	YER146W	SAW1	P39735	261 aa		9.21	□□□□□ -0.94
LSM5	YER146W	JHD1	P40034	492 aa		9.21	□□□□□ -0.94
LSM5	YER146W	CDC1	P40986	491 aa		9.21	□□□□□ -0.94

Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms