RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W PSF3Q12146 194 aa2.47□□□□□ -2.01
SPF1YEL031W WSC3Q12215 556 aa2.47□□□□□ -2.01
SPF1YEL031W TCB1Q12466 1186 aa2.47□□□□□ -2.01
SPF1YEL031W FLO11P08640 1367 aa2.46□□□□□ -2.02
SPF1YEL031W SEM1O94742 89 aa2.46□□□□□ -2.02
SPF1YEL031W MF(ALPHA)1P01149 165 aa2.46□□□□□ -2.02
SPF1YEL031W CDC31P06704 161 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W GCR1P07261 785 aa2.46□□□□□ -2.02
SPF1YEL031W YAP1P19880 650 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W RPB4P20433 221 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W MAK31P23059 88 aa2.46□□□□□ -2.02
SPF1YEL031W SPB1P25582 841 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W DBF4P32325 704 aa2.46□□□□□ -2.02
SPF1YEL031W PEP7P32609 515 aa2.46□□□□□ -2.02
SPF1YEL031W ANP1P32629 500 aa2.46□□□□□ -2.02
SPF1YEL031W LRG1P35688 1017 aa2.46□□□□□ -2.02
SPF1YEL031W MRX3P38172 270 aa2.46□□□□□ -2.02
SPF1YEL031W VMA22P38784 181 aa2.46□□□□□ -2.02
SPF1YEL031W STT3P39007 718 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W MTW1P39731 289 aa2.46□□□□□ -2.02
SPF1YEL031W STL1P39932 569 aa2.46□□□□□ -2.02
SPF1YEL031W LCP5P40079 357 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W YMR147WP40218 223 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W PSF2P40359 213 aa2.46□□□□□ -2.02
SPF1YEL031W YJL070CP40361 888 aa2.46□□□□□ -2.02
SPF1YEL031W MMM1P41800 426 aa2.46□□□□□ -2.02
SPF1YEL031W RGD2P43556 714 aa2.46□□□□□ -2.02
SPF1YEL031W CNN1P43618 361 aa2.46□□□□□ -2.02
SPF1YEL031W TOS3P43637 560 aa2.46□□□□□ -2.02
SPF1YEL031W RMR1P53060 241 aa2.46□□□□□ -2.02
SPF1YEL031W USE1P53146 245 aa2.46□□□□□ -2.02
SPF1YEL031W RIM8P53179 542 aa2.46□□□□□ -2.02
SPF1YEL031W LSC2P53312 427 aa2.46□□□□□ -2.02
SPF1YEL031W YGR266WP53326 701 aa2.46□□□□□ -2.02
SPF1YEL031W GAL83Q04739 417 aa2.46□□□□□ -2.02
SPF1YEL031W RGC1Q06108 1083 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W ATG13Q06628 738 aa2.46□□□□□ -2.02
SPF1YEL031W YEH2Q07950 538 aa2.46□□□□□ -2.02
SPF1YEL031W YOL036WQ08206 761 aa2.46□□□□□ -2.02
SPF1YEL031W PUS7Q08647 676 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W TRM11Q12463 433 aa2.46□□□□□ -2.02
SPF1YEL031W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02 RIP-Chip
SPF1YEL031W ARG82P07250 355 aa2.46□□□□□ -2.02
SPF1YEL031W ERG11P10614 530 aa2.46□□□□□ -2.02
SPF1YEL031W RED1P14291 827 aa2.46□□□□□ -2.02
SPF1YEL031W HSP60P19882 572 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W PRP5P21372 849 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W SEC15P22224 910 aa2.46□□□□□ -2.02
SPF1YEL031W ATO2P32907 282 aa2.46□□□□□ -2.02
SPF1YEL031W TGL4P36165 910 aa2.46□□□□□ -2.02
SPF1YEL031W YPK3P38070 525 aa2.46□□□□□ -2.02
SPF1YEL031W FMP23P38231 175 aa2.46□□□□□ -2.02
SPF1YEL031W UBP7P40453 1071 aa2.46□□□□□ -2.02
SPF1YEL031W YRB2P40517 327 aa2.46□□□□□ -2.02
SPF1YEL031W MSS2P40990 351 aa2.46□□□□□ -2.02
SPF1YEL031W FIG4P42837 879 aa2.46□□□□□ -2.02
SPF1YEL031W SNX4P47057 423 aa2.46□□□□□ -2.02
SPF1YEL031W YGR153WP48238 217 aa2.46□□□□□ -2.02
SPF1YEL031W LIF1P53150 421 aa2.46□□□□□ -2.02
SPF1YEL031W BNI5P53890 448 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W DYN3Q04949 312 aa2.46□□□□□ -2.02
SPF1YEL031W SPC2Q04969 178 aa2.46□□□□□ -2.02
SPF1YEL031W YDR061WQ12298 539 aa2.46□□□□□ -2.02
SPF1YEL031W GPM3Q12326 303 aa2.46□□□□□ -2.02
SPF1YEL031W CBP2P03874 630 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W MCM1P11746 286 aa2.46□□□□□ -2.02
SPF1YEL031W STF2P16965 84 aa2.46□□□□□ -2.02
SPF1YEL031W THR1P17423 357 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W PRP6P19735 899 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W YKL050CP35736 922 aa2.46□□□□□ -2.02
SPF1YEL031W END3P39013 349 aa2.46□□□□□ -2.02
SPF1YEL031W THO1P40040 218 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W NUP82P40368 713 aa2.46□□□□□ -2.02
SPF1YEL031W YFH7P43591 353 aa2.46□□□□□ -2.02
SPF1YEL031W MET12P46151 657 aa2.46□□□□□ -2.02
SPF1YEL031W MDV1P47025 714 aa2.46□□□□□ -2.02
SPF1YEL031W RNR4P49723 345 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W RTA1P53047 317 aa2.46□□□□□ -2.02
SPF1YEL031W NUT1P53114 1132 aa2.46□□□□□ -2.02
SPF1YEL031W DRN1P53255 507 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W DCP2P53550 970 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W ISU1Q03020 165 aa2.46□□□□□ -2.02
SPF1YEL031W SVL3Q03088 825 aaKnown RBP2.46□□□□□ -2.02
SPF1YEL031W MUB1Q03162 620 aa2.46□□□□□ -2.02
SPF1YEL031W SYF1Q04048 859 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W FAP7Q12055 197 aaPredicted RBP2.46□□□□□ -2.02
SPF1YEL031W BAG7Q12128 409 aa2.46□□□□□ -2.02
SPF1YEL031W HSP42Q12329 375 aa2.46□□□□□ -2.02
SPF1YEL031W RTR2Q12378 196 aa2.46□□□□□ -2.02
SPF1YEL031W AVL9Q12500 764 aa2.46□□□□□ -2.02
SPF1YEL031W THS1P04801 734 aaKnown RBP2.45□□□□□ -2.02
SPF1YEL031W STI1P15705 589 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SPF1YEL031W RGR1P19263 1082 aa2.45□□□□□ -2.02
SPF1YEL031W ATP12P22135 325 aa2.45□□□□□ -2.02
SPF1YEL031W AAD3P25612 363 aa2.45□□□□□ -2.02
SPF1YEL031W CPR5P35176 225 aa2.45□□□□□ -2.02
SPF1YEL031W ANR2P36090 516 aaPredicted RBP2.45□□□□□ -2.02
SPF1YEL031W NOP4P37838 685 aaKnown RBP2.45□□□□□ -2.02
SPF1YEL031W MSG5P38590 489 aa2.45□□□□□ -2.02
SPF1YEL031W MTG2P38860 518 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 490.9 ms