RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	OPY2	Q06810	360 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	CMS1	Q07897	291 aa	Known RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	RCL1	Q08096	367 aa	Predicted RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	OSW1	Q08692	278 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	HRK1	Q08732	759 aa	Known RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	TRE1	Q08919	783 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	DAS2	Q12084	232 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	SAM35	P14693	329 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	BAS1	P22035	811 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	GSY1	P23337	708 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	LYP1	P32487	611 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	YSC84	P32793	468 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	YEL1	P34225	687 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	MCM7	P38132	845 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	OLA1	P38219	394 aa	Known RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	TDA3	P38758	523 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	SMX2	P40204	77 aa	Known RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	MPH1	P40562	993 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	NBP1	P52919	319 aa	Predicted RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	TOF1	P53840	1238 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	BNI5	P53890	448 aa	Known RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	UBX4	P54730	416 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	MDM1	Q01846	1127 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	VPS72	Q03388	795 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	SYF1	Q04048	859 aa	Predicted RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	YLR225C	Q05948	407 aa	Known RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	YLH47	Q06493	454 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	BDF2	Q07442	638 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	KEL3	Q08979	651 aa	Predicted RBP	3.2	□□□□□ -1.9
GCD6	YDR211W	SPO21	Q12411	609 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	FIG2	P25653	1609 aa		3.2	□□□□□ -1.9
GCD6	YDR211W	FOB1	O13329	566 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	ILV1	P00927	576 aa	Known RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	YER152C	P10356	443 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	SAM2	P19358	384 aa	Known RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	PRI2	P20457	528 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	SEC14	P24280	304 aa	Known RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
GCD6	YDR211W	YME2	P32843	850 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	YKL050C	P35736	922 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	FZO1	P38297	855 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	RIX1	P38883	763 aa	Predicted RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	LCP5	P40079	357 aa	Predicted RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	YFL054C	P43549	646 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	RPC17	P47076	161 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	CPR6	P53691	371 aa	Known RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	PGA2	P53903	129 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	SSY1	Q03770	852 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	YPR078C	Q06813	372 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	BRE4	Q07660	1125 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	AIM41	Q12032	185 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	SEC39	Q12745	709 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	RPB2	P08518	1224 aa	Known RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	CLN3	P13365	580 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	POL3	P15436	1097 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	IME1	P21190	360 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	YCR051W	P25631	222 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	PRO1	P32264	428 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
GCD6	YDR211W	LIP5	P32875	414 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	YHL012W	P38709	493 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	PTC7	P38797	343 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	GAA1	P39012	614 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	UBP6	P43593	499 aa	Known RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	AVT1	P47082	602 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	TMA22	P47089	198 aa	Predicted RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	LYS4	P49367	693 aa	Predicted RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	DIP5	P53388	608 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	FOL1	P53848	824 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	BET4	Q00618	327 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	RIP-Chip
GCD6	YDR211W	PLP2	Q12017	286 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	FAL1	Q12099	399 aa	Known RBP	3.19	□□□□□ -1.9
GCD6	YDR211W	YPL066W	Q12194	479 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	SMC6	Q12749	1114 aa		3.19	□□□□□ -1.9
GCD6	YDR211W	INO1	P11986	533 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	PFK1	P16861	987 aa	Known RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	CBF1	P17106	351 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	SRV2	P17555	526 aa	Known RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	ILV6	P25605	309 aa	Known RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	RPS7A	P26786	190 aa	Known RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	CDC11	P32458	415 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	SAS3	P34218	831 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	YKL069W	P36088	180 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
GCD6	YDR211W	TOM71	P38825	639 aa	Known RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	STN1	P38960	494 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	CCT3	P39077	534 aa	Known RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	SAP185	P40856	1058 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	GTS1	P40956	396 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	TDA10	P42938	290 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	NCS2	P53923	493 aa	Predicted RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	GTR1	Q00582	310 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	WRS1	Q12109	432 aa	Known RBP	3.18	□□□□□ -1.9
GCD6	YDR211W	NSI1	Q12457	570 aa		3.18	□□□□□ -1.9
GCD6	YDR211W	YLR462W	O13556	202 aa		3.17	□□□□□ -1.9
GCD6	YDR211W	MVD1	P32377	396 aa	Known RBP	3.17	□□□□□ -1.9
GCD6	YDR211W	ABD1	P32783	436 aa	Predicted RBP	3.17	□□□□□ -1.9
GCD6	YDR211W	UBC6	P33296	250 aa	Predicted RBP	3.17	□□□□□ -1.9
GCD6	YDR211W	YHL049C	P38722	271 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms