RNA–Protein interactions for RNA: YDR208W

MSS4, Transcript of Phosphatidylinositol-4-phosphate 5-kinase, yeast

Gene MSS4, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS4	YDR208W	ATG11	Q12527	1178 aa		4.23	□□□□□ -1.73
MSS4	YDR208W	LST4	P34239	828 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	SET3	P36124	751 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	IFA38	P38286	347 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	UPF3	P48412	387 aa	Known RBP	4.22	□□□□□ -1.73
MSS4	YDR208W	BUL1	P48524	976 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	MTL1	P53214	551 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	IWR1	Q07532	353 aa	Predicted RBP	4.22	□□□□□ -1.73
MSS4	YDR208W	POM34	Q12445	299 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	RPP2A	P05319	106 aa	Known RBP	4.22	□□□□□ -1.73
MSS4	YDR208W	POL3	P15436	1097 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	UBC1	P21734	215 aa	Known RBP	4.22	□□□□□ -1.73
MSS4	YDR208W	SWI4	P25302	1093 aa	Known RBP	4.22	□□□□□ -1.73
MSS4	YDR208W	MSS1	P32559	526 aa	Predicted RBP	4.22	□□□□□ -1.73
MSS4	YDR208W	XRS2	P33301	854 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	AXL2	P38928	823 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	INP52	P50942	1183 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	VBA4	Q04602	768 aa	Known RBP	4.22	□□□□□ -1.73
MSS4	YDR208W	ENT2	Q05785	613 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	RXT3	Q07458	294 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	AAD4	Q07747	329 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	DFG16	Q99234	619 aa		4.22	□□□□□ -1.73
MSS4	YDR208W	PHO5	P00635	467 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	PEX1	P24004	1043 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	PRP45	P28004	379 aa	Predicted RBP	4.21	□□□□□ -1.74
MSS4	YDR208W	VID22	Q05934	901 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	SGO1	Q08490	590 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	ERG20	P08524	352 aa	Known RBP	4.21	□□□□□ -1.74
MSS4	YDR208W	GUK1	P15454	187 aa	Known RBP	4.21	□□□□□ -1.74
MSS4	YDR208W	CHS3	P29465	1165 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	TAF5	P38129	798 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	EHT1	P38295	451 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	NOC2	P39744	710 aa	Known RBP	4.21	□□□□□ -1.74
MSS4	YDR208W	DPH1	P40487	425 aa	Known RBP	4.21	□□□□□ -1.74
MSS4	YDR208W	SMK1	P41808	388 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	POL31	P46957	487 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	MDM1	Q01846	1127 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	MRPL13	Q02204	264 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	IMH1	Q06704	911 aa	Known RBP	4.21	□□□□□ -1.74
MSS4	YDR208W	RTP1	Q12751	981 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	SSM4	P40318	1319 aa		4.21	□□□□□ -1.74
MSS4	YDR208W	ADE3	P07245	946 aa	Known RBP	4.2	□□□□□ -1.74
MSS4	YDR208W	BIK1	P11709	440 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	TUP1	P16649	713 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	CBF2	P32504	956 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	YBR053C	P38235	358 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	GSM1	P42950	618 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	TAH11	P47112	604 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	NRG1	Q03125	231 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	PPN1	Q04119	674 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	SDH5	Q08230	162 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	RER1	P25560	188 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	MUD2	P36084	527 aa	Known RBP	4.2	□□□□□ -1.74
MSS4	YDR208W	POL12	P38121	705 aa	Predicted RBP	4.2	□□□□□ -1.74
MSS4	YDR208W	FMO1	P38866	432 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	CTF18	P49956	741 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	IMA1	P53051	589 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	COX18	P53239	316 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	GAD1	Q04792	585 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	ARR3	Q06598	404 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	YCG1	Q06680	1035 aa		4.2	□□□□□ -1.74
MSS4	YDR208W	PUS1	Q12211	544 aa	Known RBP	4.2	□□□□□ -1.74
MSS4	YDR208W	RPS13	P05756	151 aa	Known RBP	4.19	□□□□□ -1.74
MSS4	YDR208W	GFD2	P25370	566 aa	Known RBP	4.19	□□□□□ -1.74
MSS4	YDR208W	NDE1	P40215	560 aa		4.19	□□□□□ -1.74
MSS4	YDR208W	RAD26	P40352	1085 aa		4.19	□□□□□ -1.74
MSS4	YDR208W	ESL1	P40456	1118 aa		4.19	□□□□□ -1.74
MSS4	YDR208W	TIM50	Q02776	476 aa		4.19	□□□□□ -1.74
MSS4	YDR208W	CRD1	Q07560	283 aa		4.19	□□□□□ -1.74
MSS4	YDR208W	MED1	Q12321	566 aa		4.19	□□□□□ -1.74
MSS4	YDR208W	TRM13	Q12383	476 aa		4.19	□□□□□ -1.74
MSS4	YDR208W	CLB4	P24871	460 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	KIN82	P25341	720 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	NFU1	P32860	256 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	APT2	P36973	181 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	YER010C	P40011	234 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	FKH2	P41813	862 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	SPO1	P53541	631 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	YKU80	Q04437	629 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	ADY4	Q05955	493 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	YFT2	Q06676	274 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	ICL2	Q12031	575 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	LAT1	P12695	482 aa	Known RBP	4.18	□□□□□ -1.74
MSS4	YDR208W	SAN1	P22470	610 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	RIT1	P23796	513 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	PRP22	P24384	1145 aa	Known RBP	4.18	□□□□□ -1.74
MSS4	YDR208W	BCS1	P32839	456 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
MSS4	YDR208W	NUP60	P39705	539 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	FDC1	Q03034	503 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	GIR2	Q03768	265 aa	Predicted RBP	4.18	□□□□□ -1.74
MSS4	YDR208W	CDA2	Q06703	312 aa		4.18	□□□□□ -1.74
MSS4	YDR208W	NUC1	P08466	329 aa		4.17	□□□□□ -1.74
MSS4	YDR208W	FEN2	P25621	512 aa	Known RBP	4.17	□□□□□ -1.74
MSS4	YDR208W	COS111	P38308	924 aa		4.17	□□□□□ -1.74
MSS4	YDR208W	CCT3	P39077	534 aa	Known RBP	4.17	□□□□□ -1.74
MSS4	YDR208W	VPS8	P39702	1274 aa		4.17	□□□□□ -1.74
MSS4	YDR208W	AIM21	P40563	679 aa		4.17	□□□□□ -1.74
MSS4	YDR208W	LSB3	P43603	459 aa	Known RBP	4.17	□□□□□ -1.74
MSS4	YDR208W	SQS1	P53866	767 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms