RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC13	YDL220C	ALD5	P40047	520 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	GID8	P40208	455 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	XKS1	P42826	600 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	DIE2	P50076	525 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	GOR1	P53839	350 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	MAK10	Q02197	733 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	ELP3	Q02908	557 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	MTC5	Q03897	1148 aa		7.31	□□□□□ -1.24
CDC13	YDL220C	UTP5	Q04177	643 aa	Known RBP	7.31	□□□□□ -1.24
CDC13	YDL220C	RPN13	O13563	156 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	SIT4	P20604	311 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	SPB1	P25582	841 aa	Predicted RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	PDC6	P26263	563 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	PTC3	P34221	468 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	YBL028C	P38202	106 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	SIP5	P40210	489 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	RTS2	P40962	232 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	BUD6	P41697	788 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	YFH7	P43591	353 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	UBX4	P54730	416 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	SMP3	Q04174	516 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	VIP1	Q06685	1146 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	DTD1	Q07648	150 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	RSC58	Q07979	502 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	SNU23	Q12368	194 aa	Predicted RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	RRP5	Q05022	1729 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	RAD4	P14736	754 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	SER33	P40510	469 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	EMW1	P42842	904 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	VTC4	P47075	721 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	BPL1	P48445	690 aa	Predicted RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	MET13	P53128	600 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	OSH6	Q02201	448 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	ATG38	Q05789	226 aa	Known RBP	7.3	□□□□□ -1.24
CDC13	YDL220C	MLH2	Q07980	695 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	GAS4	Q08271	471 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	VPS54	Q12071	889 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	HUA2	Q12134	243 aa		7.3	□□□□□ -1.24
CDC13	YDL220C	NAM7	P30771	971 aa	Known RBP	7.29	□□□□□ -1.24
CDC13	YDL220C	RAD24	P32641	659 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	GCG1	P32656	232 aa	Known RBP	7.29	□□□□□ -1.24
CDC13	YDL220C	AFR1	P33304	620 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	PAM1	P37304	830 aa	Known RBP	7.29	□□□□□ -1.24
CDC13	YDL220C	RFT1	P38206	574 aa	Predicted RBP	7.29	□□□□□ -1.24
CDC13	YDL220C	ERP2	P39704	215 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	JLP2	P40206	208 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	MRPS35	P53292	345 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	MPS1	P54199	764 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	RPT6	Q01939	405 aa	Known RBP	7.29	□□□□□ -1.24
CDC13	YDL220C	TFB3	Q03290	321 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	PKH3	Q03306	898 aa	Predicted RBP	7.29	□□□□□ -1.24
CDC13	YDL220C	TRM8	Q12009	286 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	BNA6	P43619	295 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	YGR153W	P48238	217 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	YNR063W	P53749	607 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	FMP42	Q04991	504 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	ICL2	Q12031	575 aa		7.29	□□□□□ -1.24
CDC13	YDL220C	CCP1	P00431	361 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	IPP1	P00817	287 aa	Known RBP	7.28	□□□□□ -1.24
CDC13	YDL220C	GLN4	P13188	809 aa	Known RBP	7.28	□□□□□ -1.24
CDC13	YDL220C	ZIP1	P31111	875 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	CTM1	P38818	585 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	VMA7	P39111	118 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	NIT3	P49954	291 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	INA17	Q02888	182 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	YDL121C	Q07541	149 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	YGL041W-A	P0C5N3	154 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	KSS1	P14681	368 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	POL3	P15436	1097 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	RAD27	P26793	382 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	HBS1	P32769	611 aa	Known RBP	7.28	□□□□□ -1.24
CDC13	YDL220C	MCD4	P36051	919 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	YBR138C	P38277	524 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	YHL017W	P38745	532 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	ZIP2	P53061	704 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	CGR1	P53188	120 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	CPR6	P53691	371 aa	Known RBP	7.28	□□□□□ -1.24
CDC13	YDL220C	VAC7	P53950	1165 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	MDM1	Q01846	1127 aa		7.28	□□□□□ -1.24
CDC13	YDL220C	SEC7	P11075	2009 aa	Known RBP	7.28	□□□□□ -1.24
CDC13	YDL220C	HXK1	P04806	485 aa	Known RBP	7.27	□□□□□ -1.25
CDC13	YDL220C	ARG81	P05085	880 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	GSY1	P23337	708 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	GRX4	P32642	244 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	YBL010C	P32788	280 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	RFC3	P38629	340 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	SBE2	P42223	864 aa	Known RBP	7.27	□□□□□ -1.25
CDC13	YDL220C	QRI1	P43123	477 aa	Known RBP	7.27	□□□□□ -1.25
CDC13	YDL220C	DSD1	P53095	428 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	SDH1	Q00711	640 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	YDR514C	Q04408	483 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	HRK1	Q08732	759 aa	Known RBP	7.27	□□□□□ -1.25
CDC13	YDL220C	YLR278C	Q05854	1341 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	MF(ALPHA)1	P01149	165 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	CLG1	P35190	452 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	UTP30	P36144	274 aa	Known RBP	7.27	□□□□□ -1.25
CDC13	YDL220C	TYS1	P36421	394 aa	Known RBP	7.27	□□□□□ -1.25
CDC13	YDL220C	RFS1	P38234	210 aa	Known RBP	7.27	□□□□□ -1.25
CDC13	YDL220C	TDA3	P38758	523 aa		7.27	□□□□□ -1.25
CDC13	YDL220C	SER3	P40054	469 aa		7.27	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms