RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C BNI5P53890 448 aaKnown RBP5.58□□□□□ -1.52
SCM3YDL139C UME1Q03010 460 aa5.58□□□□□ -1.52
SCM3YDL139C RCL1Q08096 367 aaPredicted RBP5.58□□□□□ -1.52
SCM3YDL139C CDC37P06101 506 aaKnown RBP5.57□□□□□ -1.52
SCM3YDL139C PPR1P07272 904 aaPredicted RBP5.57□□□□□ -1.52
SCM3YDL139C SAM35P14693 329 aa5.57□□□□□ -1.52
SCM3YDL139C PFK1P16861 987 aaKnown RBP5.57□□□□□ -1.52
SCM3YDL139C SNF5P18480 905 aa5.57□□□□□ -1.52
SCM3YDL139C SPO11P23179 398 aa5.57□□□□□ -1.52
SCM3YDL139C PRP22P24384 1145 aaKnown RBP5.57□□□□□ -1.52
SCM3YDL139C DBP7P36120 742 aaKnown RBP5.57□□□□□ -1.52
SCM3YDL139C SIP3P38717 1229 aa5.57□□□□□ -1.52
SCM3YDL139C BCD1P38772 366 aa5.57□□□□□ -1.52
SCM3YDL139C YIL089WP40500 205 aa5.57□□□□□ -1.52
SCM3YDL139C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SCM3YDL139C HOS3Q02959 697 aaKnown RBP5.57□□□□□ -1.52
SCM3YDL139C DIG1Q03063 452 aaKnown RBP5.57□□□□□ -1.52
SCM3YDL139C YLR125WQ12138 136 aa5.57□□□□□ -1.52
SCM3YDL139C ATG9Q12142 997 aa5.57□□□□□ -1.52
SCM3YDL139C ERP3Q12403 225 aa5.57□□□□□ -1.52
SCM3YDL139C CEX1Q12453 761 aa5.57□□□□□ -1.52
SCM3YDL139C NBL1Q3E7Y6 73 aa5.57□□□□□ -1.52
SCM3YDL139C HBN1Q96VH4 193 aa5.57□□□□□ -1.52
SCM3YDL139C TOP3P13099 656 aa5.56□□□□□ -1.52
SCM3YDL139C RPL8AP17076 256 aaKnown RBP5.56□□□□□ -1.52
SCM3YDL139C RAD57P25301 460 aa5.56□□□□□ -1.52
SCM3YDL139C PAP1P29468 568 aaKnown RBP5.56□□□□□ -1.52
SCM3YDL139C SLA2P33338 968 aa5.56□□□□□ -1.52
SCM3YDL139C YBR284WP38150 797 aa5.56□□□□□ -1.52
SCM3YDL139C SET5P38890 526 aaKnown RBP5.56□□□□□ -1.52
SCM3YDL139C SPT8P38915 602 aa5.56□□□□□ -1.52
SCM3YDL139C LCB2P40970 561 aa5.56□□□□□ -1.52
SCM3YDL139C ZAP1P47043 880 aa5.56□□□□□ -1.52
SCM3YDL139C CAF130P53280 1122 aaPredicted RBP5.56□□□□□ -1.52
SCM3YDL139C TNA1P53322 534 aa5.56□□□□□ -1.52
SCM3YDL139C TOF1P53840 1238 aa5.56□□□□□ -1.52
SCM3YDL139C SPH1Q06160 661 aa5.56□□□□□ -1.52
SCM3YDL139C TCO89Q08921 799 aa5.56□□□□□ -1.52
SCM3YDL139C FOB1O13329 566 aa5.55□□□□□ -1.52
SCM3YDL139C PET123P17558 318 aa5.55□□□□□ -1.52
SCM3YDL139C THI4P32318 326 aa5.55□□□□□ -1.52
SCM3YDL139C AAR2P32357 355 aaPredicted RBP5.55□□□□□ -1.52
SCM3YDL139C YKL151CP36059 337 aa5.55□□□□□ -1.52
SCM3YDL139C CTM1P38818 585 aa5.55□□□□□ -1.52
SCM3YDL139C VFA1P40080 203 aa5.55□□□□□ -1.52
SCM3YDL139C SHQ1P40486 507 aaPredicted RBP5.55□□□□□ -1.52
SCM3YDL139C BOP3P53958 396 aa5.55□□□□□ -1.52
SCM3YDL139C ORC3P54790 616 aa5.55□□□□□ -1.52
SCM3YDL139C BUL2Q03758 920 aaKnown RBP5.55□□□□□ -1.52
SCM3YDL139C GFD1Q04839 188 aaKnown RBP5.55□□□□□ -1.52
SCM3YDL139C ACM1Q08981 209 aa5.55□□□□□ -1.52
SCM3YDL139C GIN4Q12263 1142 aa5.55□□□□□ -1.52
SCM3YDL139C UBC1P21734 215 aaKnown RBP5.54□□□□□ -1.52
SCM3YDL139C YUR1P26725 428 aa5.54□□□□□ -1.52
SCM3YDL139C PEX2P32800 271 aa5.54□□□□□ -1.52
SCM3YDL139C AIM26P32858 118 aa5.54□□□□□ -1.52
SCM3YDL139C MCR1P36060 302 aaKnown RBP5.54□□□□□ -1.52
SCM3YDL139C YKL023WP36103 277 aaKnown RBP5.54□□□□□ -1.52
SCM3YDL139C BAP2P38084 609 aa5.54□□□□□ -1.52
SCM3YDL139C GEM1P39722 662 aa5.54□□□□□ -1.52
SCM3YDL139C PEA2P40091 420 aa5.54□□□□□ -1.52
SCM3YDL139C PTA1Q01329 785 aaPredicted RBP5.54□□□□□ -1.52
SCM3YDL139C MFM1Q02783 413 aa5.54□□□□□ -1.52
SCM3YDL139C FUS2Q05670 677 aa5.54□□□□□ -1.52
SCM3YDL139C HMI1Q12039 706 aa5.54□□□□□ -1.52
SCM3YDL139C SLX4Q12098 748 aa5.54□□□□□ -1.52
SCM3YDL139C SMC6Q12749 1114 aa5.54□□□□□ -1.52
SCM3YDL139C TOM70P07213 617 aaKnown RBP5.53□□□□□ -1.52
SCM3YDL139C ERG11P10614 530 aa5.53□□□□□ -1.52
SCM3YDL139C CLN3P13365 580 aa5.53□□□□□ -1.52
SCM3YDL139C MSD1P15179 658 aaKnown RBP5.53□□□□□ -1.52
SCM3YDL139C CDC12P32468 407 aaKnown RBP5.53□□□□□ -1.52
SCM3YDL139C XRS2P33301 854 aa5.53□□□□□ -1.52
SCM3YDL139C STO1P34160 861 aaKnown RBP5.53□□□□□ -1.52
SCM3YDL139C FLR1P38124 548 aa5.53□□□□□ -1.52
SCM3YDL139C ETP1P38748 585 aaKnown RBP5.53□□□□□ -1.52
SCM3YDL139C FIS1P40515 155 aa5.53□□□□□ -1.52
SCM3YDL139C EFM4P40516 257 aa5.53□□□□□ -1.52
SCM3YDL139C VTC2P43585 828 aa5.53□□□□□ -1.52
SCM3YDL139C RPS7BP48164 190 aaKnown RBP5.53□□□□□ -1.52
SCM3YDL139C CCM1P48237 864 aaPredicted RBP5.53□□□□□ -1.52
SCM3YDL139C LIF1P53150 421 aa5.53□□□□□ -1.52
SCM3YDL139C TAM41P53230 385 aa5.53□□□□□ -1.52
SCM3YDL139C ERG5P54781 538 aa5.53□□□□□ -1.52
SCM3YDL139C SLD5Q03406 294 aa5.53□□□□□ -1.52
SCM3YDL139C COG4Q06096 861 aa5.53□□□□□ -1.52
SCM3YDL139C YLH47Q06493 454 aa5.53□□□□□ -1.52
SCM3YDL139C CDA2Q06703 312 aa5.53□□□□□ -1.52
SCM3YDL139C RRP6Q12149 733 aaKnown RBP5.53□□□□□ -1.52
SCM3YDL139C RIF1P29539 1916 aa5.52□□□□□ -1.53
SCM3YDL139C CKA2P19454 339 aa5.52□□□□□ -1.53
SCM3YDL139C IME1P21190 360 aa5.52□□□□□ -1.53
SCM3YDL139C SAS3P34218 831 aa5.52□□□□□ -1.53
SCM3YDL139C REG2P38232 338 aa5.52□□□□□ -1.53
SCM3YDL139C MNN1P39106 762 aa5.52□□□□□ -1.53
SCM3YDL139C SAH1P39954 449 aaKnown RBP5.52□□□□□ -1.53
SCM3YDL139C SIT1P39980 628 aa5.52□□□□□ -1.53
SCM3YDL139C STU2P46675 888 aa5.52□□□□□ -1.53
SCM3YDL139C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SCM3YDL139C ENV11P53246 860 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms