RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W CTF3Q12748 733 aa7.37□□□□□ -1.23
CDC7YDL017W KIP2P28743 706 aa7.37□□□□□ -1.23
CDC7YDL017W SRB2P34162 210 aa7.37□□□□□ -1.23
CDC7YDL017W YBR032WP38223 100 aa7.37□□□□□ -1.23
CDC7YDL017W YAP1801P38856 637 aa7.37□□□□□ -1.23
CDC7YDL017W SPC97P38863 823 aa7.37□□□□□ -1.23
CDC7YDL017W RPT2P40327 437 aaKnown RBP7.37□□□□□ -1.23
CDC7YDL017W SUB1P54000 292 aaKnown RBP7.37□□□□□ -1.23
CDC7YDL017W MUK1Q02866 612 aa7.37□□□□□ -1.23
CDC7YDL017W ELP3Q02908 557 aaKnown RBP7.37□□□□□ -1.23
CDC7YDL017W MSH6Q03834 1242 aa7.37□□□□□ -1.23
CDC7YDL017W ICL2Q12031 575 aa7.37□□□□□ -1.23
CDC7YDL017W PUS1Q12211 544 aaKnown RBP7.37□□□□□ -1.23
CDC7YDL017W LAA1P39526 2014 aa7.36□□□□□ -1.23
CDC7YDL017W ILS1P09436 1072 aaKnown RBP7.36□□□□□ -1.23
CDC7YDL017W YPK1P12688 680 aaKnown RBP7.36□□□□□ -1.23
CDC7YDL017W PMR1P13586 950 aa7.36□□□□□ -1.23
CDC7YDL017W ARG1P22768 420 aa7.36□□□□□ -1.23
CDC7YDL017W YCR015CP25616 317 aa7.36□□□□□ -1.23
CDC7YDL017W HEK2P38199 381 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
CDC7YDL017W DSE1P40077 573 aa7.36□□□□□ -1.23
CDC7YDL017W LAM5P43560 674 aa7.36□□□□□ -1.23
CDC7YDL017W NOP13P53883 403 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
CDC7YDL017W YNL035CP53962 389 aaKnown RBP7.36□□□□□ -1.23
CDC7YDL017W VPS16Q03308 798 aa7.36□□□□□ -1.23
CDC7YDL017W CMS1Q07897 291 aaKnown RBP7.36□□□□□ -1.23
CDC7YDL017W VPS5Q92331 675 aa7.36□□□□□ -1.23
CDC7YDL017W ECM29P38737 1868 aa7.36□□□□□ -1.23
CDC7YDL017W PDB1P32473 366 aaKnown RBP7.35□□□□□ -1.23
CDC7YDL017W TBS1P38114 1094 aa7.35□□□□□ -1.23
CDC7YDL017W UBX7P38349 436 aa7.35□□□□□ -1.23
CDC7YDL017W SMF2P38778 549 aa7.35□□□□□ -1.23
CDC7YDL017W LYS9P38999 446 aa7.35□□□□□ -1.23
CDC7YDL017W KTR5P53966 522 aaPredicted RBP7.35□□□□□ -1.23
CDC7YDL017W SLG1P54867 378 aa7.35□□□□□ -1.23
CDC7YDL017W MDM38Q08179 573 aa7.35□□□□□ -1.23
CDC7YDL017W RTP1Q12751 981 aa7.35□□□□□ -1.23
CDC7YDL017W MOT1P32333 1867 aa7.35□□□□□ -1.23
CDC7YDL017W IMA3P0CW40 589 aa7.34□□□□□ -1.23
CDC7YDL017W IMA4P0CW41 589 aa7.34□□□□□ -1.23
CDC7YDL017W BAS1P22035 811 aa7.34□□□□□ -1.23
CDC7YDL017W FRE1P32791 686 aa7.34□□□□□ -1.23
CDC7YDL017W KDX1P36005 433 aa7.34□□□□□ -1.23
CDC7YDL017W APN2P38207 520 aa7.34□□□□□ -1.23
CDC7YDL017W YBP1P38315 674 aa7.34□□□□□ -1.23
CDC7YDL017W ETP1P38748 585 aaKnown RBP7.34□□□□□ -1.23
CDC7YDL017W BRE5P53741 515 aaKnown RBP7.34□□□□□ -1.23
CDC7YDL017W SHE9Q04172 456 aa7.34□□□□□ -1.23
CDC7YDL017W FMP25Q08023 583 aa7.34□□□□□ -1.23
CDC7YDL017W IMA2Q08295 589 aa7.34□□□□□ -1.23
CDC7YDL017W CDC20P26309 610 aa7.33□□□□□ -1.24
CDC7YDL017W URA7P28274 579 aaKnown RBP7.33□□□□□ -1.24
CDC7YDL017W CYS3P31373 394 aaKnown RBP7.33□□□□□ -1.24
CDC7YDL017W HXT3P32466 567 aaKnown RBP7.33□□□□□ -1.24
CDC7YDL017W DUR3P33413 735 aa7.33□□□□□ -1.24
CDC7YDL017W AVT2P39981 480 aa7.33□□□□□ -1.24
CDC7YDL017W SCC4P40090 624 aa7.33□□□□□ -1.24
CDC7YDL017W STB4P50104 949 aa7.33□□□□□ -1.24
CDC7YDL017W RTA1P53047 317 aa7.33□□□□□ -1.24
CDC7YDL017W YGR283CP53336 341 aaPredicted RBP7.33□□□□□ -1.24
CDC7YDL017W LSC1P53598 329 aaKnown RBP7.33□□□□□ -1.24
CDC7YDL017W YNL134CP53912 376 aaKnown RBP7.33□□□□□ -1.24
CDC7YDL017W MUB1Q03162 620 aa7.33□□□□□ -1.24
CDC7YDL017W ADE13Q05911 482 aaKnown RBP7.33□□□□□ -1.24
CDC7YDL017W DNL4Q08387 944 aaPredicted RBP7.33□□□□□ -1.24
CDC7YDL017W VHS3Q08438 674 aa7.33□□□□□ -1.24
CDC7YDL017W THI21Q08975 551 aa7.33□□□□□ -1.24
CDC7YDL017W RIB2Q12362 591 aaKnown RBP7.33□□□□□ -1.24
CDC7YDL017W PRP4P20053 465 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W DIA4P38705 446 aaPredicted RBP7.32□□□□□ -1.24
CDC7YDL017W CKB2P38930 258 aa7.32□□□□□ -1.24
CDC7YDL017W TFG1P41895 735 aaPredicted RBP7.32□□□□□ -1.24
CDC7YDL017W EMW1P42842 904 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W TAH11P47112 604 aa7.32□□□□□ -1.24
CDC7YDL017W YJR107WP47145 328 aa7.32□□□□□ -1.24
CDC7YDL017W NMA111P53920 997 aa7.32□□□□□ -1.24
CDC7YDL017W TIF35Q04067 274 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W SPC24Q04477 213 aa7.32□□□□□ -1.24
CDC7YDL017W MAG2Q06436 670 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W YLL056CQ12177 298 aa7.32□□□□□ -1.24
CDC7YDL017W TIF6Q12522 245 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W IZH4Q99393 312 aa7.32□□□□□ -1.24
CDC7YDL017W TOM1Q03280 3268 aa7.32□□□□□ -1.24
CDC7YDL017W TEF1P02994 458 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W TPK1P06244 397 aa7.32□□□□□ -1.24
CDC7YDL017W SSC1P0CS90 654 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W RSA4P25382 515 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W GAC1P28006 793 aa7.32□□□□□ -1.24
CDC7YDL017W BUD2P33314 1104 aa7.32□□□□□ -1.24
CDC7YDL017W ETR1P38071 380 aa7.32□□□□□ -1.24
CDC7YDL017W HSL7P38274 827 aa7.32□□□□□ -1.24
CDC7YDL017W HSM3P38348 480 aa7.32□□□□□ -1.24
CDC7YDL017W LIN1P38852 340 aaPredicted RBP7.32□□□□□ -1.24
CDC7YDL017W NMD3P38861 518 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W OAF1P39720 1047 aaPredicted RBP7.32□□□□□ -1.24
CDC7YDL017W ALD5P40047 520 aaKnown RBP7.32□□□□□ -1.24
CDC7YDL017W PFD1P46988 109 aa7.32□□□□□ -1.24
CDC7YDL017W TMA22P47089 198 aaPredicted RBP7.32□□□□□ -1.24
CDC7YDL017W RFX1P48743 811 aa7.32□□□□□ -1.24
CDC7YDL017W AZR1P50080 613 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 106.4 ms