RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	RPS0B	P46654	252 aa	Known RBP	3.03	□□□□□ -1.92
SPB1	YCL054W	TAN1	P53072	289 aa	Predicted RBP	3.03	□□□□□ -1.92
SPB1	YCL054W	CPR6	P53691	371 aa	Known RBP	3.03	□□□□□ -1.92
SPB1	YCL054W	ERP4	Q12450	207 aa		3.03	□□□□□ -1.92
SPB1	YCL054W	PHO81	P17442	1178 aa		3.03	□□□□□ -1.92
SPB1	YCL054W	ADP1	P25371	1049 aa		3.03	□□□□□ -1.92
SPB1	YCL054W	YCR015C	P25616	317 aa		3.03	□□□□□ -1.92
SPB1	YCL054W	CHS3	P29465	1165 aa		3.03	□□□□□ -1.92
SPB1	YCL054W	PUG1	P40100	303 aa		3.03	□□□□□ -1.92
SPB1	YCL054W	YIL108W	P40483	696 aa	Known RBP	3.03	□□□□□ -1.92
SPB1	YCL054W	RLP24	Q07915	199 aa	Known RBP	3.03	□□□□□ -1.92
SPB1	YCL054W	ESC8	Q08119	714 aa		3.03	□□□□□ -1.92
SPB1	YCL054W	FOB1	O13329	566 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	RPS9A	O13516	197 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	CDC31	P06704	161 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	SNF1	P06782	633 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	YEL076C-A	P0CX16	216 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	YLR464W	P0CX17	216 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	MTF2	P10849	440 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
SPB1	YCL054W	PRP4	P20053	465 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	GFD2	P25370	566 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	MTC7	P32633	139 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	RRN3	P36070	627 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	MUD2	P36084	527 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	ESL2	P36168	1195 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	POA1	P38218	177 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	RFC5	P38251	354 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	CTF8	P38877	133 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	VPS8	P39702	1274 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	YEL076C	P39971	216 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	MNT2	P53059	558 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	YGR012W	P53206	393 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	BLS1	Q06071	122 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	OPY2	Q06810	360 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	WHI4	Q07655	649 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	TRM8	Q12009	286 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	RPS17A	P02407	136 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	RPS17B	P14127	136 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	MSH1	P25846	959 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	STE14	P32584	239 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	TGL1	P34163	548 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	LRG1	P35688	1017 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	AXL2	P38928	823 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	STT3	P39007	718 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	DPH1	P40487	425 aa	Known RBP	3.02	□□□□□ -1.93
SPB1	YCL054W	SSY5	P47002	699 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	ENT1	Q12518	454 aa		3.02	□□□□□ -1.93
SPB1	YCL054W	GCD1	P09032	578 aa	Predicted RBP	3.01	□□□□□ -1.93
SPB1	YCL054W	SAN1	P22470	610 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	YCL049C	P25577	312 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	APM3	P38153	483 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	SET2	P46995	733 aa	Known RBP	3.01	□□□□□ -1.93
SPB1	YCL054W	IML2	P47031	731 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	YAP1802	P53309	568 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	YNR071C	P53757	342 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	RSB1	Q08417	382 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	PRP45	P28004	379 aa	Predicted RBP	3.01	□□□□□ -1.93
SPB1	YCL054W	YBR138C	P38277	524 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	IFA38	P38286	347 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	SDP1	P40479	209 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	HOL1	P53389	586 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	SLU7	Q02775	382 aa	Known RBP	3.01	□□□□□ -1.93
SPB1	YCL054W	TRE1	Q08919	783 aa		3.01	□□□□□ -1.93
SPB1	YCL054W	TUB3	P09734	445 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	HSF1	P10961	833 aa		3	□□□□□ -1.93
SPB1	YCL054W	GUK1	P15454	187 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	MCM3	P24279	971 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	APL1	P27351	700 aa		3	□□□□□ -1.93
SPB1	YCL054W	FRD1	P32614	470 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	AIM26	P32858	118 aa		3	□□□□□ -1.93
SPB1	YCL054W	HMO1	Q03973	246 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	MUS81	Q04149	632 aa	Predicted RBP	3	□□□□□ -1.93
SPB1	YCL054W	YKU80	Q04437	629 aa		3	□□□□□ -1.93
SPB1	YCL054W	SGD1	Q06132	899 aa		3	□□□□□ -1.93
SPB1	YCL054W	MCH5	Q08777	521 aa		3	□□□□□ -1.93
SPB1	YCL054W	YOR352W	Q08816	343 aa		3	□□□□□ -1.93
SPB1	YCL054W	PSF3	Q12146	194 aa		3	□□□□□ -1.93
SPB1	YCL054W	DBP10	Q12389	995 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	SNU66	Q12420	587 aa	Predicted RBP	3	□□□□□ -1.93
SPB1	YCL054W	VAS1	P07806	1104 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	DAL5	P15365	543 aa		3	□□□□□ -1.93
SPB1	YCL054W	MET8	P15807	274 aa		3	□□□□□ -1.93
SPB1	YCL054W	SPE2	P21182	396 aa		3	□□□□□ -1.93
SPB1	YCL054W	APL2	P36000	726 aa	Predicted RBP	3	□□□□□ -1.93
SPB1	YCL054W	SET3	P36124	751 aa		3	□□□□□ -1.93
SPB1	YCL054W	CDS1	P38221	457 aa		3	□□□□□ -1.93
SPB1	YCL054W	URM1	P40554	99 aa	Predicted RBP	3	□□□□□ -1.93
SPB1	YCL054W	BUD8	P41698	603 aa		3	□□□□□ -1.93
SPB1	YCL054W	PFA3	P42836	336 aa		3	□□□□□ -1.93
SPB1	YCL054W	ARA2	Q04212	335 aa		3	□□□□□ -1.93
SPB1	YCL054W	VID22	Q05934	901 aa		3	□□□□□ -1.93
SPB1	YCL054W	YPL277C	Q08989	487 aa		3	□□□□□ -1.93
SPB1	YCL054W	LPX1	Q12405	387 aa	Known RBP	3	□□□□□ -1.93
SPB1	YCL054W	KCS1	Q12494	1050 aa		3	□□□□□ -1.93
SPB1	YCL054W	SPS1	P08458	490 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	AAC3	P18238	307 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	CBP3	P21560	335 aa		2.99	□□□□□ -1.93
SPB1	YCL054W	UBC1	P21734	215 aa	Known RBP	2.99	□□□□□ -1.93
SPB1	YCL054W	RER1	P25560	188 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms