RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	RIM8	P53179	542 aa		14.02	□□□□□ -0.16
SSA1	YAL005C	MAL13	P53338	473 aa		14.02	□□□□□ -0.16
SSA1	YAL005C	HRD3	Q05787	833 aa		14.02	□□□□□ -0.16
SSA1	YAL005C	ECI1	Q05871	280 aa		14.02	□□□□□ -0.16
SSA1	YAL005C	MNL2	Q12205	849 aa		14.02	□□□□□ -0.16
SSA1	YAL005C	RGD1	P38339	666 aa		14.02	□□□□□ -0.17
SSA1	YAL005C	RIM4	P38741	713 aa		14.02	□□□□□ -0.17
SSA1	YAL005C	END3	P39013	349 aa		14.02	□□□□□ -0.17
SSA1	YAL005C	RPC17	P47076	161 aa		14.02	□□□□□ -0.17
SSA1	YAL005C	RRB1	Q04225	511 aa	Known RBP	14.02	□□□□□ -0.17
SSA1	YAL005C	NOP14	Q99207	810 aa	Known RBP	14.02	□□□□□ -0.17
SSA1	YAL005C	RAD10	P06838	210 aa		14.01	□□□□□ -0.17
SSA1	YAL005C	YGR283C	P53336	341 aa	Predicted RBP	14.01	□□□□□ -0.17
SSA1	YAL005C	CDC55	Q00362	526 aa		14.01	□□□□□ -0.17
SSA1	YAL005C	HER2	Q03557	464 aa		14.01	□□□□□ -0.17
SSA1	YAL005C	YLR257W	Q06146	321 aa	Known RBP	14.01	□□□□□ -0.17
SSA1	YAL005C	THI20	Q08224	551 aa		14.01	□□□□□ -0.17
SSA1	YAL005C	AIM41	Q12032	185 aa		14.01	□□□□□ -0.17
SSA1	YAL005C	SFL1	P20134	766 aa		14	□□□□□ -0.17
SSA1	YAL005C	MAD1	P40957	749 aa		14	□□□□□ -0.17
SSA1	YAL005C	VPS25	P47142	202 aa		14	□□□□□ -0.17
SSA1	YAL005C	TDA9	Q04545	1251 aa		14	□□□□□ -0.17
SSA1	YAL005C	GCG1	P32656	232 aa	Known RBP	14	□□□□□ -0.17
SSA1	YAL005C	BYE1	P36106	594 aa		14	□□□□□ -0.17
SSA1	YAL005C	LYS9	P38999	446 aa		14	□□□□□ -0.17
SSA1	YAL005C	CEG1	Q01159	459 aa	Predicted RBP	14	□□□□□ -0.17
SSA1	YAL005C	YMR187C	Q03236	431 aa		14	□□□□□ -0.17
SSA1	YAL005C	VTI1	Q04338	217 aa		14	□□□□□ -0.17
SSA1	YAL005C	RMP1	Q12530	201 aa		14	□□□□□ -0.17
SSA1	YAL005C	SPE1	P08432	466 aa		13.99	□□□□□ -0.17
SSA1	YAL005C	PMS1	P14242	873 aa		13.99	□□□□□ -0.17
SSA1	YAL005C	TMA108	P40462	946 aa		13.99	□□□□□ -0.17
SSA1	YAL005C	VTC4	P47075	721 aa		13.99	□□□□□ -0.17
SSA1	YAL005C	YNL040W	P53960	456 aa	Predicted RBP	13.99	□□□□□ -0.17
SSA1	YAL005C	KAP95	Q06142	861 aa	Known RBP	13.99	□□□□□ -0.17
SSA1	YAL005C	APC5	Q08683	685 aa		13.99	□□□□□ -0.17
SSA1	YAL005C	SFI1	Q12369	946 aa		13.99	□□□□□ -0.17
SSA1	YAL005C	PDE1	P22434	369 aa		13.98	□□□□□ -0.17
SSA1	YAL005C	DSS4	P32601	143 aa		13.98	□□□□□ -0.17
SSA1	YAL005C	ECM22	Q05958	814 aa	Predicted RBP	13.98	□□□□□ -0.17
SSA1	YAL005C	TUB3	P09734	445 aa	Known RBP	13.98	□□□□□ -0.17
SSA1	YAL005C	DOS2	P54858	310 aa		13.98	□□□□□ -0.17
SSA1	YAL005C	MTD1	Q02046	320 aa	Known RBP	13.98	□□□□□ -0.17
SSA1	YAL005C	MTG1	Q03151	367 aa	Predicted RBP	13.98	□□□□□ -0.17
SSA1	YAL005C	GCN5	Q03330	439 aa		13.98	□□□□□ -0.17
SSA1	YAL005C	YKR051W	P36142	418 aa		13.97	□□□□□ -0.17
SSA1	YAL005C	PCA1	P38360	1216 aa		13.97	□□□□□ -0.17
SSA1	YAL005C	CCT4	P39078	528 aa	Known RBP	13.97	□□□□□ -0.17
SSA1	YAL005C	ERP2	P39704	215 aa		13.97	□□□□□ -0.17
SSA1	YAL005C	SPG3	Q04398	127 aa	Predicted RBP	13.97	□□□□□ -0.17
SSA1	YAL005C	ATG23	Q06671	453 aa		13.97	□□□□□ -0.17
SSA1	YAL005C	YDR034W-B	Q6Q5X2	51 aa		13.97	□□□□□ -0.17
SSA1	YAL005C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	13.96	□□□□□ -0.17	not detected
SSA1	YAL005C	GCD6	P32501	712 aa	Known RBP	13.96	□□□□□ -0.17
SSA1	YAL005C	TSA1	P34760	196 aa	Known RBP	13.96	□□□□□ -0.17
SSA1	YAL005C	MMS21	P38632	267 aa		13.96	□□□□□ -0.17
SSA1	YAL005C	SLX8	P40072	274 aa		13.96	□□□□□ -0.17
SSA1	YAL005C	MKT1	P40850	830 aa	Known RBP	13.96	□□□□□ -0.17
SSA1	YAL005C	PRP31	P49704	494 aa	Predicted RBP	13.96	□□□□□ -0.17
SSA1	YAL005C	BET4	Q00618	327 aa		13.96	□□□□□ -0.17
SSA1	YAL005C	RKM2	Q03942	479 aa		13.96	□□□□□ -0.17
SSA1	YAL005C	CIR2	Q08822	631 aa		13.96	□□□□□ -0.17
SSA1	YAL005C	THI21	Q08975	551 aa		13.96	□□□□□ -0.17
SSA1	YAL005C	YPK1	P12688	680 aa	Known RBP	13.96	□□□□□ -0.18
SSA1	YAL005C	RGR1	P19263	1082 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	YBR225W	P38321	900 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	SAP185	P40856	1058 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	YJL045W	P47052	634 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	YML6	P51998	286 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	YNL108C	P53929	270 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	INA17	Q02888	182 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	THI7	Q05998	598 aa		13.96	□□□□□ -0.18
SSA1	YAL005C	MEI4	P29467	408 aa		13.95	□□□□□ -0.18
SSA1	YAL005C	DAL1	P32375	460 aa		13.95	□□□□□ -0.18
SSA1	YAL005C	HXT3	P32466	567 aa	Known RBP	13.95	□□□□□ -0.18
SSA1	YAL005C	ALY2	P47029	1046 aa		13.95	□□□□□ -0.18
SSA1	YAL005C	YNL144C	P53907	740 aa		13.95	□□□□□ -0.18
SSA1	YAL005C	KTR6	P54070	446 aa		13.95	□□□□□ -0.18
SSA1	YAL005C	FMP25	Q08023	583 aa		13.95	□□□□□ -0.18
SSA1	YAL005C	YDR018C	Q12185	396 aa		13.95	□□□□□ -0.18
SSA1	YAL005C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	13.94	□□□□□ -0.18	not detected
SSA1	YAL005C	CNS1	P33313	385 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	CDC27	P38042	758 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	FLC2	P39719	783 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	NMD5	P46970	1048 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	TY4A-J	P47023	414 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	YVH1	Q02256	364 aa	Known RBP	13.94	□□□□□ -0.18
SSA1	YAL005C	LCB4	Q12246	624 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	ARP7	Q12406	477 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	CCP1	P00431	361 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	YCR015C	P25616	317 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	SAK1	P38990	1142 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	ARG2	P40360	574 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	YNL247W	P53852	767 aa	Known RBP	13.94	□□□□□ -0.18
SSA1	YAL005C	AIM32	Q04689	311 aa		13.94	□□□□□ -0.18
SSA1	YAL005C	QCR6	P00127	147 aa		13.93	□□□□□ -0.18
SSA1	YAL005C	RAD16	P31244	790 aa		13.93	□□□□□ -0.18
SSA1	YAL005C	SYN8	P31377	255 aa		13.93	□□□□□ -0.18
SSA1	YAL005C	RRP1	P35178	278 aa	Predicted RBP	13.93	□□□□□ -0.18
SSA1	YAL005C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	13.93	□□□□□ -0.18	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms