RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ZMYM3Q14202 1370 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 ZC3H12CQ9C0D7 883 aaKnown RBP9.58□□□□□ -0.88
CTNND1-227ENST00000530748 TFCP2L1Q9NZI6 479 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 KRT86O43790 486 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 GTF2F1P35269 517 aaKnown RBP eCLIP9.58□□□□□ -0.885e-6■■■□□ 17.8
CTNND1-227ENST00000530748 FMNL3Q8IVF7 1028 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 ZNF830Q96NB3 372 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-227ENST00000530748 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 STK24Q9Y6E0 443 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 KIF4AO95239 1232 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 PUM3Q15397 648 aaKnown RBP9.58□□□□□ -0.88
CTNND1-227ENST00000530748 GRIPAP1Q4V328 841 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 HSP90AA4PQ58FG1 418 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 APBB1IPQ7Z5R6 666 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-227ENST00000530748 CCDC50Q8IVM0 306 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 METTL22Q9BUU2 404 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-227ENST00000530748 CLEC11AQ9Y240 323 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 MBD4O95243 580 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 PPP1R2P41236 205 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 PARP10Q53GL7 1025 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 CCDC186Q7Z3E2 898 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 USP26Q9BXU7 913 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 CTNND2Q9UQB3 1225 aa9.58□□□□□ -0.88
CTNND1-227ENST00000530748 ARHGEF10O15013 1369 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 GCP02774 474 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 TUBB4BP68371 445 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
CTNND1-227ENST00000530748 SV2BQ7L1I2 683 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 VTI1AQ96AJ9 217 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 CCDC77Q9BR77 488 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 IQCGQ9H095 443 aaKnown RBP9.57□□□□□ -0.88
CTNND1-227ENST00000530748 SAP30BPQ9UHR5 308 aaKnown RBP9.57□□□□□ -0.88
CTNND1-227ENST00000530748 DNAI1Q9UI46 699 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 EEF2P13639 858 aaKnown RBP9.57□□□□□ -0.88
CTNND1-227ENST00000530748 TNNI3KQ59H18 835 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 FPGT-TNNI3KV9GXZ4 949 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 ITGA6P23229 1130 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 TTC6Q86TZ1 520 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 ATP10AO60312 1499 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 KIF5AQ12840 1032 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-227ENST00000530748 TNNQ9UQP3 1299 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 PTGS1P23219 599 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 GJC1P36383 396 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 CCDC65Q8IXS2 484 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 JDP2Q8WYK2 163 aa9.57□□□□□ -0.88
CTNND1-227ENST00000530748 ATP2A1O14983 1001 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 MAST3O60307 1309 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 SLC27A2O14975 620 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 GNPATO15228 680 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 CALUO43852 315 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-227ENST00000530748 PDE8AO60658 829 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 PLCD1P51178 756 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 CERS3Q8IU89 383 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 FAM212AQ96EL1 285 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 PZPP20742 1482 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 DEXIO95424 95 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 EPB41P11171 864 aaKnown RBP9.56□□□□□ -0.88
CTNND1-227ENST00000530748 RFX1P22670 979 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 LMOD1P29536 600 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-227ENST00000530748 NBPF14Q5TI25 921 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 TICAM2Q86XR7 235 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 DDX21Q9NR30 783 aaKnown RBP eCLIP9.56□□□□□ -0.884e-6■□□□□ 11.2
CTNND1-227ENST00000530748 DNAJC5BQ9UF47 199 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 ZBTB21Q9ULJ3 1066 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 FRMD4BQ9Y2L6 1034 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 HS2ST1Q7LGA3 356 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 KRT222Q8N1A0 295 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 IQUBQ8NA54 791 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 CCDC42Q96M95 316 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 ADGRL2O95490 1459 aa9.56□□□□□ -0.88
CTNND1-227ENST00000530748 ARID5AQ03989 594 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 PAIP2Q9BPZ3 127 aaKnown RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 NSFL1CQ9UNZ2 370 aaKnown RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 CEP83Q9Y592 693 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 LMTK3Q96Q04 1460 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 HOXB7P09629 217 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 RXRAP19793 462 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 RPL13P26373 211 aaKnown RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 CNBD1Q8NA66 436 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 PHACTR3Q96KR7 559 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 UFL1O94874 794 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 IL13P35225 146 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 TRIM14Q14142 442 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 RBM26Q5T8P6 1007 aaKnown RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 TEX11Q8IYF3 940 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 PSMD1Q99460 953 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 CARD14Q9BXL6 1004 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 ARFGAP3Q9NP61 516 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 RLBP1P12271 317 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 HIBADHP31937 336 aaKnown RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 ZNF174Q15697 407 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 LLPHQ9BRT6 129 aaKnown RBP9.55□□□□□ -0.88
CTNND1-227ENST00000530748 BTG4Q9NY30 223 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 GCC2Q8IWJ2 1684 aa9.55□□□□□ -0.88
CTNND1-227ENST00000530748 EYA2O00167 538 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms