RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Ltb4r2Q9JJL9 360 aa10.55□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Ccl26F8VQM2 93 aa10.54□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Ccl5P30882 91 aa10.54□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Ccdc125Q5U465 500 aa10.54□□□□□ -0.72
Scn8a-202ENSMUST00000096198 BcanQ61361 883 aa10.54□□□□□ -0.72
Scn8a-202ENSMUST00000096198 PpatQ8CIH9 517 aa10.54□□□□□ -0.72
Scn8a-202ENSMUST00000096198 GckrQ91X44 587 aa10.54□□□□□ -0.72
Scn8a-202ENSMUST00000096198 U2af1Q9D883 239 aaKnown RBP10.54□□□□□ -0.72
Scn8a-202ENSMUST00000096198 TectaO08523 2155 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Wfdc11A2A5H7 82 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Rfpl4bJ3QPR6 266 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Nf2P46662 596 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Sez6lQ6P1D5 963 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Tmem39bQ810L4 492 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Fbxo46Q8BG80 603 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Slc4a8Q8JZR6 1089 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Ero1bQ8R2E9 467 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Pank3Q8R2W9 370 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Gtf2iQ9ESZ8 998 aaKnown RBP10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Foxo4Q9WVH3 505 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 Slfn1Q9Z0I7 337 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 RptorQ8K4Q0 1335 aa10.53□□□□□ -0.72
Scn8a-202ENSMUST00000096198 R3hdm1E9Q9Q2 1135 aaKnown RBP10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Gm9857F7CXR1 130 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Cyp19a1P28649 503 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Csrnp1P59054 583 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ddx4Q61496 702 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Slc39a11Q8BWY7 342 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 EngaseQ8BX80 734 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 PfasQ5SUR0 1337 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Plcg1Q62077 1302 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Rpgrip1Q9EPQ2 1331 aa10.52□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Pibf1E9Q6K3 756 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Nck2O55033 380 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Igfbp4P47879 254 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Bend4P86174 541 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ccdc148Q6P5U8 527 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ms4a5Q810P8 197 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Cyp26b1Q811W2 512 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Adam33Q923W9 797 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Il21rQ9JHX3 529 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Umodl1Q5DID3 1319 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Col1a2Q01149 1372 aa10.51□□□□□ -0.73
Scn8a-202ENSMUST00000096198 AcrP23578 436 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Myo1bP46735 1107 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Defa-rs7P50715 91 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ephb4P54761 987 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Eif4a1P60843 406 aaKnown RBP10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ccdc33Q3ULW6 985 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Gm29609Q3UU56 907 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ece1Q4PZA2 769 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Gnl3lQ6PGG6 577 aaKnown RBP10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ubap2lQ80X50 1107 aaKnown RBP10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Gtf3c2Q8BL74 907 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Dlk2Q8K1E3 382 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 McamQ8R2Y2 648 aaKnown RBP10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Slc44a4Q91VA1 707 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Atg13Q91YI1 516 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ppp2r2dQ925E7 453 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Sept3Q9Z1S5 350 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ank1Q02357 1862 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Cacna1hO88427 2365 aa10.5□□□□□ -0.73
Scn8a-202ENSMUST00000096198 VcanQ62059 3357 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Clrn2B2RVW2 232 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Cald1E9QA15 768 aaKnown RBP10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Mmp10O55123 476 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Cops6O88545 324 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Plekha7Q3UIL6 1118 aaKnown RBP10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Slc10a5Q5PT54 434 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Gm11437Q5QR91 290 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Rab11fip3Q8CHD8 1047 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Slc14a2Q8R4T9 930 aa10.49□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Rtf1A2AQ19 715 aaKnown RBP10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Syn1O88935 706 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 LtkP08923 888 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Mmp14P53690 582 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 IntuQ059U7 942 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Col9a2Q07643 688 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Lgr6Q3UVD5 967 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 AY761185Q5ERI8 94 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ccdc85aQ5SP85 500 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 PtprcapQ64697 197 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Nim1kQ8BHI9 436 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Tbc1d10bQ8BHL3 798 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Trib2Q8K4K3 343 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Taf7Q9R1C0 341 aa10.48□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Elavl4Q61701 385 aaKnown RBP10.47□□□□□ -0.73
Scn8a-202ENSMUST00000096198 ScapQ6GQT6 1276 aa10.47□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Q8C5S3 137 aa10.47□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Tmc2Q8R4P4 888 aa10.47□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Katnbl1Q9CWJ3 299 aa10.47□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ifi207E9Q3L4 978 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Wisp1O54775 367 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Diaph2O70566 1098 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Hoxd8P23463 289 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Cyp2c38P56655 490 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Rnf216P58283 853 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Ccdc51Q3URS9 406 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 EspnlQ3UYR4 1005 aa10.46□□□□□ -0.73
Scn8a-202ENSMUST00000096198 Defb36Q8K3U4 67 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms