Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Gm25239-201ENSMUST00000174915 86 ntBASIC39.82■■■■□ 3.97
Gm29609Q3UU56 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Gm29609Q3UU56 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Gm29609Q3UU56 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Gm29609Q3UU56 Gm24109-201ENSMUST00000175489 103 ntBASIC35.1■■■■□ 3.21
Gm29609Q3UU56 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Gm29609Q3UU56 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.01■■■■□ 3.04
Gm29609Q3UU56 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Gm29609Q3UU56 Gm15042-201ENSMUST00000120212 883 ntBASIC33.88■■■■□ 3.01
Gm29609Q3UU56 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.67■■■□□ 2.98
Gm29609Q3UU56 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Gm29609Q3UU56 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Gm29609Q3UU56 Gm23366-201ENSMUST00000175022 89 ntBASIC33.17■■■□□ 2.9
Gm29609Q3UU56 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.01■■■□□ 2.87
Gm29609Q3UU56 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Gm29609Q3UU56 Psd-208ENSMUST00000224556 2034 ntBASIC32.88■■■□□ 2.85
Gm29609Q3UU56 Gm15045-201ENSMUST00000117359 883 ntBASIC32.87■■■□□ 2.85
Gm29609Q3UU56 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.81■■■□□ 2.84
Gm29609Q3UU56 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Gm29609Q3UU56 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Gm29609Q3UU56 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.5■■■□□ 2.79
Gm29609Q3UU56 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Gm29609Q3UU56 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.91■■■□□ 2.7
Gm29609Q3UU56 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.91■■■□□ 2.7
Gm29609Q3UU56 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gm29609Q3UU56 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Gm29609Q3UU56 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Gm29609Q3UU56 Gm25238-201ENSMUST00000174914 89 ntBASIC31.7■■■□□ 2.67
Gm29609Q3UU56 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Gm29609Q3UU56 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Gm29609Q3UU56 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Gm29609Q3UU56 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Gm29609Q3UU56 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Gm29609Q3UU56 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Gm29609Q3UU56 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Gm29609Q3UU56 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Gm29609Q3UU56 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Gm29609Q3UU56 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Gm29609Q3UU56 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Gm29609Q3UU56 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Gm29609Q3UU56 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Gm29609Q3UU56 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
Gm29609Q3UU56 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.98■■■□□ 2.55
Gm29609Q3UU56 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.97■■■□□ 2.55
Gm29609Q3UU56 Gm25262-201ENSMUST00000174934 133 ntBASIC30.96■■■□□ 2.55
Gm29609Q3UU56 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Gm29609Q3UU56 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Gm29609Q3UU56 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Gm29609Q3UU56 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Gm29609Q3UU56 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.68■■■□□ 2.5
Gm29609Q3UU56 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Gm29609Q3UU56 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Gm29609Q3UU56 Gm26115-201ENSMUST00000175605 87 ntBASIC30.59■■■□□ 2.49
Gm29609Q3UU56 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.57■■■□□ 2.48
Gm29609Q3UU56 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.55■■■□□ 2.48
Gm29609Q3UU56 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Gm29609Q3UU56 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.53■■■□□ 2.48
Gm29609Q3UU56 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gm29609Q3UU56 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Gm29609Q3UU56 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.32■■■□□ 2.44
Gm29609Q3UU56 Gm8109-201ENSMUST00000194076 746 ntBASIC30.27■■■□□ 2.44
Gm29609Q3UU56 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Gm29609Q3UU56 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Gm29609Q3UU56 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Gm29609Q3UU56 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.15■■■□□ 2.42
Gm29609Q3UU56 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.1■■■□□ 2.41
Gm29609Q3UU56 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Gm29609Q3UU56 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.05■■■□□ 2.4
Gm29609Q3UU56 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.94■■■□□ 2.38
Gm29609Q3UU56 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm29609Q3UU56 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Gm29609Q3UU56 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Gm29609Q3UU56 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Gm29609Q3UU56 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Gm29609Q3UU56 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Gm29609Q3UU56 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.69■■■□□ 2.34
Gm29609Q3UU56 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.68■■■□□ 2.34
Gm29609Q3UU56 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Gm29609Q3UU56 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gm29609Q3UU56 Rab21-202ENSMUST00000218831 843 ntBASIC29.6■■■□□ 2.33
Gm29609Q3UU56 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Gm29609Q3UU56 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.52■■■□□ 2.32
Gm29609Q3UU56 Gm27325-201ENSMUST00000175467 74 ntBASIC29.45■■■□□ 2.31
Gm29609Q3UU56 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Gm29609Q3UU56 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Gm29609Q3UU56 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gm29609Q3UU56 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Gm29609Q3UU56 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Gm29609Q3UU56 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.32■■■□□ 2.28
Gm29609Q3UU56 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.31■■■□□ 2.28
Gm29609Q3UU56 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Gm29609Q3UU56 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Gm29609Q3UU56 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.24■■■□□ 2.27
Gm29609Q3UU56 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Gm29609Q3UU56 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm29609Q3UU56 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.14■■■□□ 2.26
Gm29609Q3UU56 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.12■■■□□ 2.25
Gm29609Q3UU56 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Gm29609Q3UU56 Gm24804-201ENSMUST00000174982 85 ntBASIC29.11■■■□□ 2.25
Gm29609Q3UU56 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms