Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm25239-201ENSMUST00000174915 86 ntBASIC41.7■■■■■ 4.27
Syn1O88935 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Syn1O88935 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Syn1O88935 Gm24109-201ENSMUST00000175489 103 ntBASIC36.57■■■■□ 3.44
Syn1O88935 Gm15042-201ENSMUST00000120212 883 ntBASIC35.72■■■■□ 3.31
Syn1O88935 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Syn1O88935 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
Syn1O88935 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Syn1O88935 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Syn1O88935 Gm15045-201ENSMUST00000117359 883 ntBASIC34.75■■■■□ 3.15
Syn1O88935 Gm23366-201ENSMUST00000175022 89 ntBASIC34.73■■■■□ 3.15
Syn1O88935 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.35■■■■□ 3.09
Syn1O88935 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.06■■■■□ 3.04
Syn1O88935 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Syn1O88935 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Syn1O88935 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.91■■■■□ 3.02
Syn1O88935 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Syn1O88935 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Syn1O88935 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.24■■■□□ 2.91
Syn1O88935 Gm25238-201ENSMUST00000174914 89 ntBASIC33.14■■■□□ 2.9
Syn1O88935 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Syn1O88935 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Syn1O88935 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Syn1O88935 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Syn1O88935 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Syn1O88935 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.42■■■□□ 2.78
Syn1O88935 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
Syn1O88935 Gm25262-201ENSMUST00000174934 133 ntBASIC32.16■■■□□ 2.74
Syn1O88935 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Syn1O88935 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Syn1O88935 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.93■■■□□ 2.7
Syn1O88935 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.84■■■□□ 2.69
Syn1O88935 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.83■■■□□ 2.69
Syn1O88935 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Syn1O88935 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.68■■■□□ 2.66
Syn1O88935 Gm26115-201ENSMUST00000175605 87 ntBASIC31.66■■■□□ 2.66
Syn1O88935 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.66■■■□□ 2.66
Syn1O88935 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Syn1O88935 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.56■■■□□ 2.64
Syn1O88935 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Syn1O88935 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Syn1O88935 Gm8109-201ENSMUST00000194076 746 ntBASIC31.4■■■□□ 2.62
Syn1O88935 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Syn1O88935 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.34■■■□□ 2.61
Syn1O88935 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Syn1O88935 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Syn1O88935 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Syn1O88935 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Syn1O88935 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Syn1O88935 Gm27325-201ENSMUST00000175467 74 ntBASIC31.13■■■□□ 2.57
Syn1O88935 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.11■■■□□ 2.57
Syn1O88935 Rab21-202ENSMUST00000218831 843 ntBASIC31.07■■■□□ 2.56
Syn1O88935 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Syn1O88935 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.87■■■□□ 2.53
Syn1O88935 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Syn1O88935 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.69■■■□□ 2.5
Syn1O88935 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.66■■■□□ 2.5
Syn1O88935 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.63■■■□□ 2.49
Syn1O88935 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Syn1O88935 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Syn1O88935 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Syn1O88935 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Syn1O88935 Psd-208ENSMUST00000224556 2034 ntBASIC30.5■■■□□ 2.47
Syn1O88935 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Syn1O88935 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Syn1O88935 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Syn1O88935 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Syn1O88935 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Syn1O88935 Gm24804-201ENSMUST00000174982 85 ntBASIC30.25■■■□□ 2.43
Syn1O88935 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.23■■■□□ 2.43
Syn1O88935 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Syn1O88935 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Syn1O88935 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.14■■■□□ 2.42
Syn1O88935 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Syn1O88935 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Syn1O88935 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.01■■■□□ 2.4
Syn1O88935 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.95■■■□□ 2.38
Syn1O88935 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
Syn1O88935 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.9■■■□□ 2.38
Syn1O88935 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.86■■■□□ 2.37
Syn1O88935 Gm27322-201ENSMUST00000184007 104 ntBASIC29.85■■■□□ 2.37
Syn1O88935 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Syn1O88935 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Syn1O88935 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Syn1O88935 Zfp131-205ENSMUST00000223812 663 ntBASIC29.74■■■□□ 2.35
Syn1O88935 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Syn1O88935 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Syn1O88935 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Syn1O88935 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Syn1O88935 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.66■■■□□ 2.34
Syn1O88935 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Syn1O88935 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.63■■■□□ 2.33
Syn1O88935 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Syn1O88935 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Syn1O88935 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Syn1O88935 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.61■■■□□ 2.33
Syn1O88935 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.59■■■□□ 2.33
Syn1O88935 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Syn1O88935 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
Syn1O88935 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms