Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm25239-201ENSMUST00000174915 86 ntBASIC41,7■■■■■ 4,27
Syn1O88935 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,92■■■■□ 3,82
Syn1O88935 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38,3■■■■□ 3,72
Syn1O88935 Gm24109-201ENSMUST00000175489 103 ntBASIC36,57■■■■□ 3,44
Syn1O88935 Gm15042-201ENSMUST00000120212 883 ntBASIC35,72■■■■□ 3,31
Syn1O88935 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35,35■■■■□ 3,25
Syn1O88935 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35,24■■■■□ 3,23
Syn1O88935 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3,19
Syn1O88935 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,89■■■■□ 3,18
Syn1O88935 Gm15045-201ENSMUST00000117359 883 ntBASIC34,75■■■■□ 3,15
Syn1O88935 Gm23366-201ENSMUST00000175022 89 ntBASIC34,73■■■■□ 3,15
Syn1O88935 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34,35■■■■□ 3,09
Syn1O88935 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,06■■■■□ 3,04
Syn1O88935 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
Syn1O88935 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3,03
Syn1O88935 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,91■■■■□ 3,02
Syn1O88935 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,4■■■□□ 2,94
Syn1O88935 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33,3■■■□□ 2,92
Syn1O88935 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33,24■■■□□ 2,91
Syn1O88935 Gm25238-201ENSMUST00000174914 89 ntBASIC33,14■■■□□ 2,9
Syn1O88935 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,13■■■□□ 2,89
Syn1O88935 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33,1■■■□□ 2,89
Syn1O88935 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,09■■■□□ 2,89
Syn1O88935 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,47■■■□□ 2,79
Syn1O88935 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32,44■■■□□ 2,78
Syn1O88935 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32,42■■■□□ 2,78
Syn1O88935 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32,22■■■□□ 2,75
Syn1O88935 Gm25262-201ENSMUST00000174934 133 ntBASIC32,16■■■□□ 2,74
Syn1O88935 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,04■■■□□ 2,72
Syn1O88935 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,03■■■□□ 2,72
Syn1O88935 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,93■■■□□ 2,7
Syn1O88935 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31,84■■■□□ 2,69
Syn1O88935 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,83■■■□□ 2,69
Syn1O88935 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31,73■■■□□ 2,67
Syn1O88935 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31,68■■■□□ 2,66
Syn1O88935 Gm26115-201ENSMUST00000175605 87 ntBASIC31,66■■■□□ 2,66
Syn1O88935 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,66■■■□□ 2,66
Syn1O88935 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,61■■■□□ 2,65
Syn1O88935 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,56■■■□□ 2,64
Syn1O88935 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,51■■■□□ 2,63
Syn1O88935 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,49■■■□□ 2,63
Syn1O88935 Gm8109-201ENSMUST00000194076 746 ntBASIC31,4■■■□□ 2,62
Syn1O88935 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31,37■■■□□ 2,61
Syn1O88935 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,34■■■□□ 2,61
Syn1O88935 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31,33■■■□□ 2,61
Syn1O88935 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31,33■■■□□ 2,61
Syn1O88935 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Syn1O88935 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Syn1O88935 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31,18■■■□□ 2,58
Syn1O88935 Gm27325-201ENSMUST00000175467 74 ntBASIC31,13■■■□□ 2,57
Syn1O88935 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31,11■■■□□ 2,57
Syn1O88935 Rab21-202ENSMUST00000218831 843 ntBASIC31,07■■■□□ 2,56
Syn1O88935 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,97■■■□□ 2,55
Syn1O88935 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30,87■■■□□ 2,53
Syn1O88935 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,86■■■□□ 2,53
Syn1O88935 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30,69■■■□□ 2,5
Syn1O88935 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,66■■■□□ 2,5
Syn1O88935 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,63■■■□□ 2,49
Syn1O88935 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,63■■■□□ 2,49
Syn1O88935 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Syn1O88935 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,6■■■□□ 2,49
Syn1O88935 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Syn1O88935 Psd-208ENSMUST00000224556 2034 ntBASIC30,5■■■□□ 2,47
Syn1O88935 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,46■■■□□ 2,47
Syn1O88935 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Syn1O88935 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,36■■■□□ 2,45
Syn1O88935 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Syn1O88935 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,29■■■□□ 2,44
Syn1O88935 Gm24804-201ENSMUST00000174982 85 ntBASIC30,25■■■□□ 2,43
Syn1O88935 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,23■■■□□ 2,43
Syn1O88935 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,23■■■□□ 2,43
Syn1O88935 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,14■■■□□ 2,42
Syn1O88935 Gm17082-201ENSMUST00000166043 1091 ntBASIC30,14■■■□□ 2,42
Syn1O88935 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,12■■■□□ 2,41
Syn1O88935 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,07■■■□□ 2,4
Syn1O88935 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30,01■■■□□ 2,4
Syn1O88935 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29,95■■■□□ 2,38
Syn1O88935 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,9■■■□□ 2,38
Syn1O88935 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29,9■■■□□ 2,38
Syn1O88935 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,86■■■□□ 2,37
Syn1O88935 Gm27322-201ENSMUST00000184007 104 ntBASIC29,85■■■□□ 2,37
Syn1O88935 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29,84■■■□□ 2,37
Syn1O88935 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Syn1O88935 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29,76■■■□□ 2,35
Syn1O88935 Zfp131-205ENSMUST00000223812 663 ntBASIC29,74■■■□□ 2,35
Syn1O88935 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Syn1O88935 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Syn1O88935 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Syn1O88935 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,67■■■□□ 2,34
Syn1O88935 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,66■■■□□ 2,34
Syn1O88935 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Syn1O88935 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29,63■■■□□ 2,33
Syn1O88935 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,63■■■□□ 2,33
Syn1O88935 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Syn1O88935 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Syn1O88935 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29,61■■■□□ 2,33
Syn1O88935 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,59■■■□□ 2,33
Syn1O88935 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Syn1O88935 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,57■■■□□ 2,32
Syn1O88935 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,56■■■□□ 2,32
Retrieved 100 of 76,532 protein–RNA pairs in 17,5 ms