Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Gm25239-201ENSMUST00000174915 86 ntBASIC42.92■■■■■ 4.46
Ccl5P30882 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.01■■■■■ 4
Ccl5P30882 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
Ccl5P30882 Gm24109-201ENSMUST00000175489 103 ntBASIC37.55■■■■□ 3.6
Ccl5P30882 Gm15042-201ENSMUST00000120212 883 ntBASIC36.86■■■■□ 3.49
Ccl5P30882 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
Ccl5P30882 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.29■■■■□ 3.4
Ccl5P30882 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Ccl5P30882 Gm15045-201ENSMUST00000117359 883 ntBASIC35.89■■■■□ 3.34
Ccl5P30882 Gm23366-201ENSMUST00000175022 89 ntBASIC35.79■■■■□ 3.32
Ccl5P30882 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Ccl5P30882 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.25■■■■□ 3.23
Ccl5P30882 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.97■■■■□ 3.19
Ccl5P30882 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Ccl5P30882 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Ccl5P30882 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.8■■■■□ 3.16
Ccl5P30882 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Ccl5P30882 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ccl5P30882 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.22■■■■□ 3.07
Ccl5P30882 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.21■■■■□ 3.07
Ccl5P30882 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Ccl5P30882 Gm25238-201ENSMUST00000174914 89 ntBASIC34.08■■■■□ 3.05
Ccl5P30882 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.43■■■□□ 2.94
Ccl5P30882 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Ccl5P30882 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
Ccl5P30882 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Ccl5P30882 Gm25262-201ENSMUST00000174934 133 ntBASIC33.05■■■□□ 2.88
Ccl5P30882 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ccl5P30882 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.95■■■□□ 2.87
Ccl5P30882 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ccl5P30882 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.83■■■□□ 2.85
Ccl5P30882 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Ccl5P30882 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Ccl5P30882 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.62■■■□□ 2.81
Ccl5P30882 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.58■■■□□ 2.81
Ccl5P30882 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.53■■■□□ 2.8
Ccl5P30882 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.53■■■□□ 2.8
Ccl5P30882 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ccl5P30882 Gm26115-201ENSMUST00000175605 87 ntBASIC32.51■■■□□ 2.79
Ccl5P30882 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.47■■■□□ 2.79
Ccl5P30882 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccl5P30882 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
Ccl5P30882 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccl5P30882 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccl5P30882 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Ccl5P30882 Gm8109-201ENSMUST00000194076 746 ntBASIC32.2■■■□□ 2.75
Ccl5P30882 Gm27325-201ENSMUST00000175467 74 ntBASIC32.17■■■□□ 2.74
Ccl5P30882 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ccl5P30882 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Ccl5P30882 Rab21-202ENSMUST00000218831 843 ntBASIC32.06■■■□□ 2.72
Ccl5P30882 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.06■■■□□ 2.72
Ccl5P30882 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccl5P30882 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.02■■■□□ 2.72
Ccl5P30882 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Ccl5P30882 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Ccl5P30882 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ccl5P30882 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccl5P30882 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.56■■■□□ 2.64
Ccl5P30882 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.56■■■□□ 2.64
Ccl5P30882 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Ccl5P30882 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.48■■■□□ 2.63
Ccl5P30882 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccl5P30882 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccl5P30882 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Ccl5P30882 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.25■■■□□ 2.59
Ccl5P30882 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccl5P30882 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccl5P30882 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccl5P30882 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccl5P30882 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.15■■■□□ 2.58
Ccl5P30882 Gm24804-201ENSMUST00000174982 85 ntBASIC31.08■■■□□ 2.57
Ccl5P30882 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.05■■■□□ 2.56
Ccl5P30882 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccl5P30882 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ccl5P30882 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ccl5P30882 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.97■■■□□ 2.55
Ccl5P30882 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ccl5P30882 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Ccl5P30882 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
Ccl5P30882 Gm27322-201ENSMUST00000184007 104 ntBASIC30.75■■■□□ 2.51
Ccl5P30882 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccl5P30882 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.69■■■□□ 2.5
Ccl5P30882 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.66■■■□□ 2.5
Ccl5P30882 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.62■■■□□ 2.49
Ccl5P30882 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.58■■■□□ 2.49
Ccl5P30882 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ccl5P30882 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Ccl5P30882 Zfp131-205ENSMUST00000223812 663 ntBASIC30.55■■■□□ 2.48
Ccl5P30882 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccl5P30882 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccl5P30882 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccl5P30882 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
Ccl5P30882 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.51■■■□□ 2.47
Ccl5P30882 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccl5P30882 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.47■■■□□ 2.47
Ccl5P30882 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.47■■■□□ 2.47
Ccl5P30882 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccl5P30882 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.45■■■□□ 2.47
Ccl5P30882 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.38■■■□□ 2.45
Ccl5P30882 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms