Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Gm25239-201ENSMUST00000174915 86 ntBASIC42,92■■■■■ 4,46
Ccl5P30882 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40,01■■■■■ 4
Ccl5P30882 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39,41■■■■□ 3,9
Ccl5P30882 Gm24109-201ENSMUST00000175489 103 ntBASIC37,55■■■■□ 3,6
Ccl5P30882 Gm15042-201ENSMUST00000120212 883 ntBASIC36,86■■■■□ 3,49
Ccl5P30882 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36,39■■■■□ 3,42
Ccl5P30882 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36,29■■■■□ 3,4
Ccl5P30882 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36,08■■■■□ 3,37
Ccl5P30882 Gm15045-201ENSMUST00000117359 883 ntBASIC35,89■■■■□ 3,34
Ccl5P30882 Gm23366-201ENSMUST00000175022 89 ntBASIC35,79■■■■□ 3,32
Ccl5P30882 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35,77■■■■□ 3,32
Ccl5P30882 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35,25■■■■□ 3,23
Ccl5P30882 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,97■■■■□ 3,19
Ccl5P30882 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34,9■■■■□ 3,18
Ccl5P30882 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34,84■■■■□ 3,17
Ccl5P30882 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34,8■■■■□ 3,16
Ccl5P30882 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34,48■■■■□ 3,11
Ccl5P30882 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34,25■■■■□ 3,07
Ccl5P30882 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34,22■■■■□ 3,07
Ccl5P30882 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34,21■■■■□ 3,07
Ccl5P30882 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34,11■■■■□ 3,05
Ccl5P30882 Gm25238-201ENSMUST00000174914 89 ntBASIC34,08■■■■□ 3,05
Ccl5P30882 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33,43■■■□□ 2,94
Ccl5P30882 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33,36■■■□□ 2,93
Ccl5P30882 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33,24■■■□□ 2,91
Ccl5P30882 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33,12■■■□□ 2,89
Ccl5P30882 Gm25262-201ENSMUST00000174934 133 ntBASIC33,05■■■□□ 2,88
Ccl5P30882 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,03■■■□□ 2,88
Ccl5P30882 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32,95■■■□□ 2,87
Ccl5P30882 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,94■■■□□ 2,86
Ccl5P30882 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32,83■■■□□ 2,85
Ccl5P30882 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,81■■■□□ 2,84
Ccl5P30882 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Ccl5P30882 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32,62■■■□□ 2,81
Ccl5P30882 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32,58■■■□□ 2,81
Ccl5P30882 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32,53■■■□□ 2,8
Ccl5P30882 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32,53■■■□□ 2,8
Ccl5P30882 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32,53■■■□□ 2,8
Ccl5P30882 Gm26115-201ENSMUST00000175605 87 ntBASIC32,51■■■□□ 2,79
Ccl5P30882 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32,47■■■□□ 2,79
Ccl5P30882 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,37■■■□□ 2,77
Ccl5P30882 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32,31■■■□□ 2,76
Ccl5P30882 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,24■■■□□ 2,75
Ccl5P30882 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32,24■■■□□ 2,75
Ccl5P30882 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32,24■■■□□ 2,75
Ccl5P30882 Gm8109-201ENSMUST00000194076 746 ntBASIC32,2■■■□□ 2,75
Ccl5P30882 Gm27325-201ENSMUST00000175467 74 ntBASIC32,17■■■□□ 2,74
Ccl5P30882 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32,11■■■□□ 2,73
Ccl5P30882 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,06■■■□□ 2,72
Ccl5P30882 Rab21-202ENSMUST00000218831 843 ntBASIC32,06■■■□□ 2,72
Ccl5P30882 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32,06■■■□□ 2,72
Ccl5P30882 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32,04■■■□□ 2,72
Ccl5P30882 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,02■■■□□ 2,72
Ccl5P30882 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31,91■■■□□ 2,7
Ccl5P30882 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31,77■■■□□ 2,68
Ccl5P30882 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31,65■■■□□ 2,66
Ccl5P30882 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31,61■■■□□ 2,65
Ccl5P30882 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31,56■■■□□ 2,64
Ccl5P30882 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,56■■■□□ 2,64
Ccl5P30882 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31,56■■■□□ 2,64
Ccl5P30882 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31,48■■■□□ 2,63
Ccl5P30882 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Ccl5P30882 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31,33■■■□□ 2,61
Ccl5P30882 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31,28■■■□□ 2,6
Ccl5P30882 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31,25■■■□□ 2,59
Ccl5P30882 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,22■■■□□ 2,59
Ccl5P30882 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31,2■■■□□ 2,59
Ccl5P30882 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Ccl5P30882 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,17■■■□□ 2,58
Ccl5P30882 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,15■■■□□ 2,58
Ccl5P30882 Gm24804-201ENSMUST00000174982 85 ntBASIC31,08■■■□□ 2,57
Ccl5P30882 Gm17082-201ENSMUST00000166043 1091 ntBASIC31,05■■■□□ 2,56
Ccl5P30882 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31,03■■■□□ 2,56
Ccl5P30882 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31,03■■■□□ 2,56
Ccl5P30882 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31,02■■■□□ 2,56
Ccl5P30882 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,97■■■□□ 2,55
Ccl5P30882 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Ccl5P30882 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Ccl5P30882 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30,79■■■□□ 2,52
Ccl5P30882 Gm27322-201ENSMUST00000184007 104 ntBASIC30,75■■■□□ 2,51
Ccl5P30882 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30,73■■■□□ 2,51
Ccl5P30882 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30,69■■■□□ 2,5
Ccl5P30882 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30,66■■■□□ 2,5
Ccl5P30882 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30,62■■■□□ 2,49
Ccl5P30882 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30,58■■■□□ 2,49
Ccl5P30882 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30,57■■■□□ 2,48
Ccl5P30882 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30,57■■■□□ 2,48
Ccl5P30882 Zfp131-205ENSMUST00000223812 663 ntBASIC30,55■■■□□ 2,48
Ccl5P30882 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Ccl5P30882 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30,54■■■□□ 2,48
Ccl5P30882 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Ccl5P30882 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30,52■■■□□ 2,48
Ccl5P30882 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,51■■■□□ 2,47
Ccl5P30882 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Ccl5P30882 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,47■■■□□ 2,47
Ccl5P30882 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30,47■■■□□ 2,47
Ccl5P30882 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Ccl5P30882 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30,45■■■□□ 2,47
Ccl5P30882 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30,38■■■□□ 2,45
Ccl5P30882 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Retrieved 100 of 76,532 protein–RNA pairs in 31,9 ms