RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Jade3Q6IE82 823 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Retreg2Q6NS82 541 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Cabp5Q9JLK3 173 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Lcmt1A0A0U1RNF2 332 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ccdc13D3YV10 709 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Pak2Q8CIN4 524 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Krt20Q9D312 431 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gipc1Q9Z0G0 333 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Klhl20Q8VCK5 604 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Efcc1Q9JJF6 558 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Rbm26Q6NZN0 1012 aaKnown RBP13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Prpf40bQ80W14 870 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Tshz3Q8CGV9 1081 aa13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ddx24Q9ESV0 857 aaKnown RBP13.88□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Chpf2Q3UU43 768 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Slx4ipQ9D7Y9 413 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Plxnc1Q9QZC2 1574 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Lrriq1Q0P5X1 1673 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Mcmdc2E9Q956 681 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Slc4a4O88343 1079 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 RbsnQ80Y56 783 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Hexim1Q8R409 356 aaKnown RBP13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Tbc1d4Q8BYJ6 1307 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Nop2Q922K7 793 aaKnown RBP13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Rrp1P56183 494 aaKnown RBP13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Cnksr2Q80YA9 1032 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Rab34Q64008 259 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Chmp6P0C0A3 200 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Pdia3P27773 505 aaKnown RBP13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gm28047Q3US59 414 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Plcd1Q8R3B1 756 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Itgb1bp2Q9R000 350 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Csrnp2Q8BGQ2 534 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Pola1P33609 1465 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Myh10Q61879 1976 aaKnown RBP13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Sem1P60897 70 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Cage1Q5IR70 849 aa13.87□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ncaph2Q8BSP2 607 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 MthfsQ9D110 203 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Mrpl12Q9DB15 201 aaKnown RBP13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ubac1Q8VDI7 409 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Bbs5Q9CZQ9 341 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Drc1Q3USS3 753 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Klhdc4Q921I2 584 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Lztfl1Q9JHQ5 299 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Eif2ak4Q9QZ05 1648 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Samd15F6XZJ7 620 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Pdrg1P59048 133 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ppfia3P60469 1194 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Atp2b3Q0VF55 1220 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Mybpc2Q5XKE0 1136 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Nsfl1cQ9CZ44 370 aaKnown RBP13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Taf7lQ9D3R9 471 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Lrriq3Q14DL3 633 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Lrrc43Q3V0L5 667 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gimap8Q75N62 688 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Rsph3bQ9DA80 389 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Zbtb16Q3UQ17 673 aa13.86□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gbp5Q8CFB4 590 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 SpopQ6ZWS8 374 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ctnna3Q65CL1 895 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Nek11Q8C0Q4 628 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ccdc175E9PVB3 822 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Sparcl1P70663 650 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 B4galnt4Q766D5 1034 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 InsrP15208 1372 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Nucb1Q02819 459 aaKnown RBP13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Q3TYL0 343 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Slc12a5Q91V14 1138 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Drc3Q9D5E4 523 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Plekhg2Q6KAU7 1340 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ppp1r12cQ3UMT1 782 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Krit1Q6S5J6 736 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Rbm19Q8R3C6 952 aaKnown RBP13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Dydc2Q9D3X8 139 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Hs6st3Q9QYK4 470 aa13.85□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Slc5a4bQ91ZP4 660 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Mapkbp1Q6NS57 1503 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Catsper2A2ARP9 588 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Gm10110D3Z5M2 615 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Kif5aP33175 1027 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Clcn1Q64347 994 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Kif11Q6P9P6 1052 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Psmd6Q99JI4 389 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Spocd1B1ASB6 936 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Traf1P39428 409 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Cnga4Q3UW12 575 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ifit2Q64112 472 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Anp32cQ64G17 123 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Traf3ip3Q8C0G2 513 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Exoc3l2D3YUP5 789 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Dcaf17Q3TUL7 519 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Apol7bB1AQP7 369 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Leo1Q5XJE5 667 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Arhgef2Q60875 985 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Ccdc189Q6NZQ0 333 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Nub1P54729 614 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Kif1bpQ6ZPU9 617 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Atp8b2P98199 1209 aa13.84□□□□□ -0.19
Vcpip1-201ENSMUST00000057438 Mcm7Q61881 719 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms