RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Rhox8Q6VSS7 320 aa21.21■□□□□ 0.99
Vcpip1-201ENSMUST00000057438 Rpgrip1Q9EPQ2 1331 aa20.55■□□□□ 0.88
Vcpip1-201ENSMUST00000057438 Cngb1E1AZ71 1325 aa20.1■□□□□ 0.81
Vcpip1-201ENSMUST00000057438 Las1lA2BE28 776 aaKnown RBP19.95■□□□□ 0.78
Vcpip1-201ENSMUST00000057438 Pelp1Q9DBD5 1123 aaKnown RBP19.76■□□□□ 0.75
Vcpip1-201ENSMUST00000057438 Rtl1Q7M732 1744 aa19.14■□□□□ 0.66
Vcpip1-201ENSMUST00000057438 Wdr66E9Q743 1299 aa19.12■□□□□ 0.65
Vcpip1-201ENSMUST00000057438 Ehmt2Q9Z148 1263 aaKnown RBP19.1■□□□□ 0.65
Vcpip1-201ENSMUST00000057438 Ube2uB1AUC4 352 aa18.85■□□□□ 0.61
Vcpip1-201ENSMUST00000057438 Zeb1Q64318 1117 aa18.82■□□□□ 0.6
Vcpip1-201ENSMUST00000057438 Esf1Q3V1V3 845 aaKnown RBP18.76■□□□□ 0.59
Vcpip1-201ENSMUST00000057438 CenpbP27790 599 aa18.76■□□□□ 0.59
Vcpip1-201ENSMUST00000057438 Ccdc180J3QNE4 1664 aa18.76■□□□□ 0.59
Vcpip1-201ENSMUST00000057438 Amer1Q7TS75 1132 aa18.72■□□□□ 0.59
Vcpip1-201ENSMUST00000057438 Stra8P70278 393 aa18.71■□□□□ 0.59
Vcpip1-201ENSMUST00000057438 Ccdc136Q3TVA9 1136 aa18.62■□□□□ 0.57
Vcpip1-201ENSMUST00000057438 Trim41Q5NCC3 630 aa18.58■□□□□ 0.57
Vcpip1-201ENSMUST00000057438 Npm2Q80W85 207 aa18.5■□□□□ 0.55
Vcpip1-201ENSMUST00000057438 NefmP08553 848 aa18.46■□□□□ 0.55
Vcpip1-201ENSMUST00000057438 Myt1Q8CFC2 1127 aa18.43■□□□□ 0.54
Vcpip1-201ENSMUST00000057438 4930567H17RikQ3V0K5 233 aa18.41■□□□□ 0.54
Vcpip1-201ENSMUST00000057438 Acin1Q9JIX8 1338 aaKnown RBP18.4■□□□□ 0.54
Vcpip1-201ENSMUST00000057438 NischQ80TM9 1593 aa18.38■□□□□ 0.53
Vcpip1-201ENSMUST00000057438 Gab3Q8BSM5 595 aa18.34■□□□□ 0.53
Vcpip1-201ENSMUST00000057438 Myt1lP97500 1187 aa18.22■□□□□ 0.51
Vcpip1-201ENSMUST00000057438 Tnnt3Q9QZ47 272 aa18.05■□□□□ 0.48
Vcpip1-201ENSMUST00000057438 Cdk11bP24788 784 aaKnown RBP17.99■□□□□ 0.47
Vcpip1-201ENSMUST00000057438 Slc24a1Q91WD8 1130 aa17.97■□□□□ 0.47
Vcpip1-201ENSMUST00000057438 UbtfP25976 765 aaKnown RBP17.97■□□□□ 0.47
Vcpip1-201ENSMUST00000057438 NeflP08551 543 aa17.96■□□□□ 0.47
Vcpip1-201ENSMUST00000057438 Anp32bQ9EST5 272 aaKnown RBP17.95■□□□□ 0.46
Vcpip1-201ENSMUST00000057438 4933416C03RikQ3V063 378 aa17.93■□□□□ 0.46
Vcpip1-201ENSMUST00000057438 Ttbk1Q6PCN3 1308 aa17.91■□□□□ 0.46
Vcpip1-201ENSMUST00000057438 Rtl5Q5DTT4 599 aa17.88■□□□□ 0.45
Vcpip1-201ENSMUST00000057438 NrdcQ8BHG1 1161 aa17.85■□□□□ 0.45
Vcpip1-201ENSMUST00000057438 HrcG5E8J6 738 aa17.73■□□□□ 0.43
Vcpip1-201ENSMUST00000057438 Nop58Q6DFW4 536 aaKnown RBP17.69■□□□□ 0.42
Vcpip1-201ENSMUST00000057438 Pcgf6Q99NA9 353 aa17.67■□□□□ 0.42
Vcpip1-201ENSMUST00000057438 NclP09405 707 aaKnown RBP17.61■□□□□ 0.41
Vcpip1-201ENSMUST00000057438 Eif5bQ05D44 1216 aaKnown RBP17.46■□□□□ 0.39
Vcpip1-201ENSMUST00000057438 Fam50aQ9WV03 339 aaKnown RBP17.45■□□□□ 0.38
Vcpip1-201ENSMUST00000057438 TonslQ6NZL6 1363 aa17.44■□□□□ 0.38
Vcpip1-201ENSMUST00000057438 Os9Q8K2C7 672 aa17.39■□□□□ 0.37
Vcpip1-201ENSMUST00000057438 Neurod1Q60867 357 aa17.34■□□□□ 0.37
Vcpip1-201ENSMUST00000057438 Anp32aO35381 247 aa17.26■□□□□ 0.35
Vcpip1-201ENSMUST00000057438 Il27Q8K3I6 234 aa17.25■□□□□ 0.35
Vcpip1-201ENSMUST00000057438 DiexfQ8BTT6 772 aaKnown RBP17.24■□□□□ 0.35
Vcpip1-201ENSMUST00000057438 Supt5hO55201 1082 aaKnown RBP17.2■□□□□ 0.34
Vcpip1-201ENSMUST00000057438 Zcchc6Q5BLK4 1491 aaKnown RBP17.2■□□□□ 0.34
Vcpip1-201ENSMUST00000057438 ClspnQ80YR7 1315 aa17.16■□□□□ 0.34
Vcpip1-201ENSMUST00000057438 DaxxO35613 739 aa17.16■□□□□ 0.34
Vcpip1-201ENSMUST00000057438 Ap3b1Q9Z1T1 1105 aa17.14■□□□□ 0.33
Vcpip1-201ENSMUST00000057438 Hdac5Q9Z2V6 1113 aa17.03■□□□□ 0.32
Vcpip1-201ENSMUST00000057438 Mier1Q5UAK0 511 aa17■□□□□ 0.31
Vcpip1-201ENSMUST00000057438 Ppargc1bQ8VHJ7 1014 aa16.94■□□□□ 0.3
Vcpip1-201ENSMUST00000057438 Abcc9P70170 1546 aa16.91■□□□□ 0.3
Vcpip1-201ENSMUST00000057438 Nlrp6Q91WS2 869 aa16.91■□□□□ 0.3
Vcpip1-201ENSMUST00000057438 Ccdc9Q8VC31 543 aaKnown RBP16.88■□□□□ 0.29
Vcpip1-201ENSMUST00000057438 Ythdc1E9Q5K9 736 aaKnown RBP16.82■□□□□ 0.28
Vcpip1-201ENSMUST00000057438 CatipB9EKE5 520 aa16.81■□□□□ 0.28
Vcpip1-201ENSMUST00000057438 Upf2A2AT37 1269 aaKnown RBP16.81■□□□□ 0.28
Vcpip1-201ENSMUST00000057438 Anks4bQ8K3X6 423 aa16.79■□□□□ 0.28
Vcpip1-201ENSMUST00000057438 Gm13697A2AK42 830 aa16.77■□□□□ 0.27
Vcpip1-201ENSMUST00000057438 Aplp2Q06335 707 aa16.76■□□□□ 0.27
Vcpip1-201ENSMUST00000057438 Dcaf1Q80TR8 1506 aa16.75■□□□□ 0.27
Vcpip1-201ENSMUST00000057438 Gm35339A0A140LHH9 1649 aa16.75■□□□□ 0.27
Vcpip1-201ENSMUST00000057438 Hnrnpul2Q00PI9 745 aaKnown RBP16.73■□□□□ 0.27
Vcpip1-201ENSMUST00000057438 Ccer2J3QPU5 274 aa16.7■□□□□ 0.26
Vcpip1-201ENSMUST00000057438 Polr3glQ8R0C0 218 aa16.68■□□□□ 0.26
Vcpip1-201ENSMUST00000057438 Plekhg3Q4VAC9 1341 aa16.65■□□□□ 0.26
Vcpip1-201ENSMUST00000057438 Npm1Q61937 292 aaKnown RBP16.65■□□□□ 0.26
Vcpip1-201ENSMUST00000057438 Hsp90aa1P07901 733 aaKnown RBP16.64■□□□□ 0.25
Vcpip1-201ENSMUST00000057438 Calr4Q3TQS0 420 aa16.63■□□□□ 0.25
Vcpip1-201ENSMUST00000057438 Zbtb7cQ8VCZ7 619 aa16.61■□□□□ 0.25
Vcpip1-201ENSMUST00000057438 Brd4Q9ESU6 1400 aaKnown RBP16.58■□□□□ 0.25
Vcpip1-201ENSMUST00000057438 Lmod2Q3UHZ5 550 aa16.58■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Atp1b4Q99ME6 356 aa16.57■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Erich6D3Z6S9 713 aa16.57■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 ArxO35085 564 aa16.56■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Csrnp3P59055 597 aa16.55■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Chic1Q8CBW7 227 aa16.55■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Cep164Q5DU05 1446 aa16.55■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Ppp4r2Q0VGB7 417 aa16.54■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Trim44Q9QXA7 346 aa16.54■□□□□ 0.24
Vcpip1-201ENSMUST00000057438 Wdr43Q6ZQL4 677 aaKnown RBP16.51■□□□□ 0.23
Vcpip1-201ENSMUST00000057438 Clip1Q922J3 1391 aa16.5■□□□□ 0.23
Vcpip1-201ENSMUST00000057438 Gm13695A2AK44 830 aa16.48■□□□□ 0.23
Vcpip1-201ENSMUST00000057438 DekQ7TNV0 380 aaKnown RBP16.46■□□□□ 0.23
Vcpip1-201ENSMUST00000057438 Zbtb4Q5F293 982 aa16.44■□□□□ 0.22
Vcpip1-201ENSMUST00000057438 Rb1cc1Q9ESK9 1588 aa16.44■□□□□ 0.22
Vcpip1-201ENSMUST00000057438 Lmod3E9QA62 571 aa16.41■□□□□ 0.22
Vcpip1-201ENSMUST00000057438 Sall2Q9QX96 1004 aa16.37■□□□□ 0.21
Vcpip1-201ENSMUST00000057438 Mapk8ip2Q9ERE9 830 aa16.36■□□□□ 0.21
Vcpip1-201ENSMUST00000057438 Eid3Q3V124 375 aa16.36■□□□□ 0.21
Vcpip1-201ENSMUST00000057438 Htatsf1Q8BGC0 757 aa16.36■□□□□ 0.21
Vcpip1-201ENSMUST00000057438 Prdm10Q3UTQ7 1184 aa16.34■□□□□ 0.21
Vcpip1-201ENSMUST00000057438 Adam1bQ8R534 806 aa16.34■□□□□ 0.21
Vcpip1-201ENSMUST00000057438 Abcc8B2RUS7 1588 aa16.31■□□□□ 0.2
Vcpip1-201ENSMUST00000057438 Gm38655A0A286YDK6 273 aa16.31■□□□□ 0.2
Vcpip1-201ENSMUST00000057438 Clstn2Q9ER65 966 aa16.31■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms