RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W TOM70P07213 617 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W RSA4P25382 515 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W FRD1P32614 470 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W PRP40P33203 583 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W MAE1P36013 669 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W SLM4P38247 162 aa3.89□□□□□ -1.79
SWI1YPL016W ERP5P38819 212 aa3.89□□□□□ -1.79
SWI1YPL016W PMC1P38929 1173 aaPredicted RBP3.89□□□□□ -1.79
SWI1YPL016W YER137CP40083 148 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W ESF2P53743 316 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W MMT1Q03218 510 aa3.89□□□□□ -1.79
SWI1YPL016W ECM11Q04110 302 aa3.89□□□□□ -1.79
SWI1YPL016W URH1Q04179 340 aa3.89□□□□□ -1.79
SWI1YPL016W GIS4Q04233 774 aa3.89□□□□□ -1.79
SWI1YPL016W VPS38Q05919 439 aa3.89□□□□□ -1.79
SWI1YPL016W RIO1Q12196 484 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W MDM20Q12387 796 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W APM4Q99186 491 aa3.89□□□□□ -1.79
SWI1YPL016W RDS2P19541 446 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W FBP26P32604 452 aa3.89□□□□□ -1.79
SWI1YPL016W SER1P33330 395 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W DUR3P33413 735 aa3.89□□□□□ -1.79
SWI1YPL016W BAP2P38084 609 aa3.89□□□□□ -1.79
SWI1YPL016W YHR218WP38899 603 aa3.89□□□□□ -1.79
SWI1YPL016W SHQ1P40486 507 aaPredicted RBP3.89□□□□□ -1.79
SWI1YPL016W YIL077CP40508 320 aa3.89□□□□□ -1.79
SWI1YPL016W FAF1P40546 346 aaPredicted RBP3.89□□□□□ -1.79
SWI1YPL016W SRB7P47822 140 aa3.89□□□□□ -1.79
SWI1YPL016W VTI1Q04338 217 aa3.89□□□□□ -1.79
SWI1YPL016W SPO20Q04359 397 aa3.89□□□□□ -1.79
SWI1YPL016W VPS36Q06696 566 aa3.89□□□□□ -1.79
SWI1YPL016W NEW1Q08972 1196 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W SLM3Q12093 417 aa3.89□□□□□ -1.79
SWI1YPL016W YBL111CQ3E7Y5 667 aa3.89□□□□□ -1.79
SWI1YPL016W YIL002W-AQ3E7Z5 69 aa3.89□□□□□ -1.79
SWI1YPL016W YCR051WP25631 222 aa3.89□□□□□ -1.79
SWI1YPL016W SSF1P38789 453 aaPredicted RBP3.89□□□□□ -1.79
SWI1YPL016W LSM12P38828 187 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W MIG2P53035 382 aa3.89□□□□□ -1.79
SWI1YPL016W UBX4P54730 416 aa3.89□□□□□ -1.79
SWI1YPL016W FOX2Q02207 900 aaKnown RBP3.89□□□□□ -1.79
SWI1YPL016W VPS16Q03308 798 aa3.89□□□□□ -1.79
SWI1YPL016W UIP4Q08926 304 aa3.89□□□□□ -1.79
SWI1YPL016W ACM1Q08981 209 aa3.89□□□□□ -1.79
SWI1YPL016W MSH5Q12175 901 aa3.89□□□□□ -1.79
SWI1YPL016W TY4A-HQ6Q5P6 413 aa3.89□□□□□ -1.79
SWI1YPL016W YLR278CQ05854 1341 aa3.88□□□□□ -1.79
SWI1YPL016W PUT2P07275 575 aa3.88□□□□□ -1.79
SWI1YPL016W SEN2P16658 377 aa3.88□□□□□ -1.79
SWI1YPL016W GRX2P17695 143 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W CKA2P19454 339 aa3.88□□□□□ -1.79
SWI1YPL016W HSP30P25619 332 aa3.88□□□□□ -1.79
SWI1YPL016W ITR1P30605 584 aa3.88□□□□□ -1.79
SWI1YPL016W RAD5P32849 1169 aaPredicted RBP3.88□□□□□ -1.79
SWI1YPL016W MRPL17P36528 281 aa3.88□□□□□ -1.79
SWI1YPL016W LIN1P38852 340 aaPredicted RBP3.88□□□□□ -1.79
SWI1YPL016W FTR1P40088 404 aa3.88□□□□□ -1.79
SWI1YPL016W ZAP1P47043 880 aa3.88□□□□□ -1.79
SWI1YPL016W NAS6P50086 228 aa3.88□□□□□ -1.79
SWI1YPL016W SAS4Q04003 481 aa3.88□□□□□ -1.79
SWI1YPL016W RQC1Q05468 723 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W VAC14Q06708 880 aa3.88□□□□□ -1.79
SWI1YPL016W HBT1Q07653 1046 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W APC5Q08683 685 aa3.88□□□□□ -1.79
SWI1YPL016W TCO89Q08921 799 aa3.88□□□□□ -1.79
SWI1YPL016W ARP6Q12509 438 aa3.88□□□□□ -1.79
SWI1YPL016W ARD1P07347 238 aaPredicted RBP3.88□□□□□ -1.79
SWI1YPL016W DAP2P18962 818 aa3.88□□□□□ -1.79
SWI1YPL016W ISY1P21374 235 aaPredicted RBP3.88□□□□□ -1.79
SWI1YPL016W COQ8P27697 501 aa3.88□□□□□ -1.79
SWI1YPL016W AKL1P38080 1108 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W YHR045WP38775 560 aa3.88□□□□□ -1.79
SWI1YPL016W RPN10P38886 268 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W RPT2P40327 437 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W EPL1P43572 832 aa3.88□□□□□ -1.79
SWI1YPL016W YGR237CP50089 785 aa3.88□□□□□ -1.79
SWI1YPL016W DSE4P53753 1117 aa3.88□□□□□ -1.79
SWI1YPL016W COG6P53959 839 aa3.88□□□□□ -1.79
SWI1YPL016W UME1Q03010 460 aa3.88□□□□□ -1.79
SWI1YPL016W YMR099CQ03161 297 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W PHM6Q05637 104 aa3.88□□□□□ -1.79
SWI1YPL016W MCM21Q06675 368 aa3.88□□□□□ -1.79
SWI1YPL016W MDM36Q06820 579 aa3.88□□□□□ -1.79
SWI1YPL016W DCS2Q12123 353 aa3.88□□□□□ -1.79
SWI1YPL016W PEP5P12868 1029 aa3.88□□□□□ -1.79
SWI1YPL016W GFD2P25370 566 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W PEP7P32609 515 aa3.88□□□□□ -1.79
SWI1YPL016W MIA40P36046 403 aa3.88□□□□□ -1.79
SWI1YPL016W MAK5P38112 773 aaPredicted RBP3.88□□□□□ -1.79
SWI1YPL016W PPS1P38148 807 aa3.88□□□□□ -1.79
SWI1YPL016W URB2P47108 1174 aa3.88□□□□□ -1.79
SWI1YPL016W DIE2P50076 525 aa3.88□□□□□ -1.79
SWI1YPL016W OKP1P53298 406 aa3.88□□□□□ -1.79
SWI1YPL016W ERB1Q04660 807 aaKnown RBP3.88□□□□□ -1.79
SWI1YPL016W DON1Q05610 365 aa3.88□□□□□ -1.79
SWI1YPL016W RAD61Q99359 647 aa3.88□□□□□ -1.79
SWI1YPL016W TEF1P02994 458 aaKnown RBP3.87□□□□□ -1.79
SWI1YPL016W PPR1P07272 904 aaPredicted RBP3.87□□□□□ -1.79
SWI1YPL016W CDC24P11433 854 aaPredicted RBP3.87□□□□□ -1.79
SWI1YPL016W PFK2P16862 959 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
Retrieved 100 of 5,963 RNA–protein pairs in 142.7 ms