RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C RAV1P47104 1357 aa3.92□□□□□ -1.78
ATG3YNR007C RPN13O13563 156 aa3.92□□□□□ -1.78
ATG3YNR007C ADE2P21264 571 aaKnown RBP3.92□□□□□ -1.78
ATG3YNR007C MVD1P32377 396 aaKnown RBP3.92□□□□□ -1.78
ATG3YNR007C YKL091CP33324 310 aaKnown RBP3.92□□□□□ -1.78
ATG3YNR007C YHR112CP38716 378 aa3.92□□□□□ -1.78
ATG3YNR007C SFB3P38810 929 aa3.92□□□□□ -1.78
ATG3YNR007C BDH2P39713 417 aa3.92□□□□□ -1.78
ATG3YNR007C MTL1P53214 551 aa3.92□□□□□ -1.78
ATG3YNR007C ORC4P54791 529 aa3.92□□□□□ -1.78
ATG3YNR007C ARG5,6Q01217 863 aa3.92□□□□□ -1.78
ATG3YNR007C EDE1P34216 1381 aa3.91□□□□□ -1.78
ATG3YNR007C MDM10P18409 493 aa3.91□□□□□ -1.78
ATG3YNR007C EMP70P32802 667 aa3.91□□□□□ -1.78
ATG3YNR007C TRZ1P36159 838 aaPredicted RBP3.91□□□□□ -1.78
ATG3YNR007C APT2P36973 181 aa3.91□□□□□ -1.78
ATG3YNR007C UBS1P38290 277 aa3.91□□□□□ -1.78
ATG3YNR007C NMD2P38798 1089 aaKnown RBP3.91□□□□□ -1.78
ATG3YNR007C FMO1P38866 432 aa3.91□□□□□ -1.78
ATG3YNR007C LYS9P38999 446 aa3.91□□□□□ -1.78
ATG3YNR007C NUP60P39705 539 aa3.91□□□□□ -1.78
ATG3YNR007C YEL020CP39994 560 aa3.91□□□□□ -1.78
ATG3YNR007C CHZ1P40019 153 aaPredicted RBP3.91□□□□□ -1.78
ATG3YNR007C MCM21Q06675 368 aa3.91□□□□□ -1.78
ATG3YNR007C BCK1Q01389 1478 aa3.91□□□□□ -1.78
ATG3YNR007C RTC1Q08281 1341 aa3.91□□□□□ -1.78
ATG3YNR007C PDR11P40550 1411 aa3.9□□□□□ -1.78
ATG3YNR007C MTC2P34246 357 aa3.9□□□□□ -1.79
ATG3YNR007C ESL2P36168 1195 aa3.9□□□□□ -1.79
ATG3YNR007C YFL052WP43551 465 aa3.9□□□□□ -1.79
ATG3YNR007C BNA2P47125 453 aa3.9□□□□□ -1.79
ATG3YNR007C FHN1P53279 174 aa3.9□□□□□ -1.79
ATG3YNR007C ATG4P53867 494 aa3.9□□□□□ -1.79
ATG3YNR007C THI7Q05998 598 aa3.9□□□□□ -1.79
ATG3YNR007C AFT2Q08957 416 aa3.9□□□□□ -1.79
ATG3YNR007C KRE5P22023 1365 aa3.89□□□□□ -1.79
ATG3YNR007C PHO11P35842 467 aa3.89□□□□□ -1.79
ATG3YNR007C PHO12P38693 467 aa3.89□□□□□ -1.79
ATG3YNR007C MIP6P38760 659 aaKnown RBP3.89□□□□□ -1.79
ATG3YNR007C GDH3P39708 457 aa3.89□□□□□ -1.79
ATG3YNR007C BUD6P41697 788 aa3.89□□□□□ -1.79
ATG3YNR007C YLR149CQ99296 730 aa3.89□□□□□ -1.79
ATG3YNR007C MCD4P36051 919 aa3.88□□□□□ -1.79
ATG3YNR007C RRP14P36080 434 aaKnown RBP3.88□□□□□ -1.79
ATG3YNR007C HRB1P38922 454 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
ATG3YNR007C DOS2P54858 310 aa3.88□□□□□ -1.79
ATG3YNR007C CLF1Q12309 687 aaPredicted RBP3.88□□□□□ -1.79
ATG3YNR007C HRP1Q99383 534 aaKnown RBP3.88□□□□□ -1.79
ATG3YNR007C TEL1P38110 2787 aa3.88□□□□□ -1.79
ATG3YNR007C ERG6P25087 383 aaKnown RBP3.87□□□□□ -1.79
ATG3YNR007C CCR4P31384 837 aaKnown RBP3.87□□□□□ -1.79
ATG3YNR007C STO1P34160 861 aaKnown RBP3.87□□□□□ -1.79
ATG3YNR007C TAF5P38129 798 aa3.87□□□□□ -1.79
ATG3YNR007C PBP2P38151 413 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
ATG3YNR007C RPN10P38886 268 aaKnown RBP3.87□□□□□ -1.79
ATG3YNR007C UBC9P50623 157 aaPredicted RBP3.87□□□□□ -1.79
ATG3YNR007C NPY1P53164 384 aa3.87□□□□□ -1.79
ATG3YNR007C REC102Q02721 264 aa3.87□□□□□ -1.79
ATG3YNR007C MRI1Q06489 411 aaKnown RBP3.87□□□□□ -1.79
ATG3YNR007C IMH1Q06704 911 aaKnown RBP3.87□□□□□ -1.79
ATG3YNR007C MLH3Q12083 715 aa3.87□□□□□ -1.79
ATG3YNR007C ZRT2Q12436 422 aa3.87□□□□□ -1.79
ATG3YNR007C ENT1Q12518 454 aa3.87□□□□□ -1.79
ATG3YNR007C YEF3P16521 1044 aaKnown RBP3.86□□□□□ -1.79
ATG3YNR007C PAC2P39937 518 aa3.86□□□□□ -1.79
ATG3YNR007C HMO1Q03973 246 aaKnown RBP3.86□□□□□ -1.79
ATG3YNR007C ICT1Q12385 394 aa3.86□□□□□ -1.79
ATG3YNR007C RAD9P14737 1309 aa3.86□□□□□ -1.79
ATG3YNR007C SSM4P40318 1319 aa3.86□□□□□ -1.79
ATG3YNR007C CIT2P08679 460 aa3.85□□□□□ -1.79
ATG3YNR007C ORC2P32833 620 aa3.85□□□□□ -1.79
ATG3YNR007C CRP1P38845 465 aaKnown RBP3.85□□□□□ -1.79
ATG3YNR007C CAF16P43569 289 aa3.85□□□□□ -1.79
ATG3YNR007C MAL11P53048 616 aa3.85□□□□□ -1.79
ATG3YNR007C RNH70P53331 553 aa3.85□□□□□ -1.79
ATG3YNR007C SNP1Q00916 300 aaPredicted RBP3.85□□□□□ -1.79
ATG3YNR007C YVH1Q02256 364 aaKnown RBP3.85□□□□□ -1.79
ATG3YNR007C YLR125WQ12138 136 aa3.85□□□□□ -1.79
ATG3YNR007C Q0142Q9ZZW4 58 aa3.85□□□□□ -1.79
ATG3YNR007C NUP192P47054 1683 aa3.84□□□□□ -1.79
ATG3YNR007C THR1P17423 357 aaKnown RBP3.84□□□□□ -1.79
ATG3YNR007C RNR1P21524 888 aaKnown RBP3.84□□□□□ -1.79
ATG3YNR007C VPS34P22543 875 aa3.84□□□□□ -1.79
ATG3YNR007C PEX1P24004 1043 aa3.84□□□□□ -1.79
ATG3YNR007C PRP45P28004 379 aaPredicted RBP3.84□□□□□ -1.79
ATG3YNR007C PPG1P32838 368 aa3.84□□□□□ -1.79
ATG3YNR007C MAL31P38156 614 aa3.84□□□□□ -1.79
ATG3YNR007C GET2P40056 285 aa3.84□□□□□ -1.79
ATG3YNR007C GID8P40208 455 aa3.84□□□□□ -1.79
ATG3YNR007C NUP82P40368 713 aa3.84□□□□□ -1.79
ATG3YNR007C MRK1P50873 501 aa3.84□□□□□ -1.79
ATG3YNR007C RGC1Q06108 1083 aaKnown RBP3.84□□□□□ -1.79
ATG3YNR007C USV1Q12132 391 aa3.84□□□□□ -1.79
ATG3YNR007C MDM12Q92328 271 aa3.84□□□□□ -1.79
ATG3YNR007C PHO8P11491 566 aa3.83□□□□□ -1.8
ATG3YNR007C FUB1P25659 250 aa3.83□□□□□ -1.8
ATG3YNR007C GMH1P36125 273 aa3.83□□□□□ -1.8
ATG3YNR007C HSL7P38274 827 aa3.83□□□□□ -1.8
ATG3YNR007C ENP1P38333 483 aaKnown RBP3.83□□□□□ -1.8
ATG3YNR007C FPR3P38911 411 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms