RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C VBA3P25594 458 aa3.86□□□□□ -1.79
CMS1YLR003C FEN2P25621 512 aaKnown RBP3.86□□□□□ -1.79
CMS1YLR003C NPY1P53164 384 aa3.86□□□□□ -1.79
CMS1YLR003C ERG13P54839 491 aaKnown RBP3.86□□□□□ -1.79
CMS1YLR003C UFO1Q04511 668 aa3.86□□□□□ -1.79
CMS1YLR003C NTH1P32356 751 aa3.85□□□□□ -1.79
CMS1YLR003C ASK1P35734 292 aa3.85□□□□□ -1.79
CMS1YLR003C YNL195CP40168 261 aa3.85□□□□□ -1.79
CMS1YLR003C PCI8P40512 444 aa3.85□□□□□ -1.79
CMS1YLR003C MNT3P40549 630 aa3.85□□□□□ -1.79
CMS1YLR003C MAF1P41910 395 aa3.85□□□□□ -1.79
CMS1YLR003C NMD5P46970 1048 aa3.85□□□□□ -1.79
CMS1YLR003C ATG36P46983 293 aa3.85□□□□□ -1.79
CMS1YLR003C RFX1P48743 811 aa3.85□□□□□ -1.79
CMS1YLR003C LSC1P53598 329 aaKnown RBP3.85□□□□□ -1.79
CMS1YLR003C CPR8P53728 308 aa3.85□□□□□ -1.79
CMS1YLR003C TSR4P25040 408 aa3.84□□□□□ -1.79
CMS1YLR003C GCS1P35197 352 aa3.84□□□□□ -1.79
CMS1YLR003C SNF12P53628 566 aa3.84□□□□□ -1.79
CMS1YLR003C PRS5Q12265 496 aaKnown RBP3.83□□□□□ -1.8
CMS1YLR003C ERG20P08524 352 aaKnown RBP3.82□□□□□ -1.8
CMS1YLR003C MSS1P32559 526 aaPredicted RBP3.82□□□□□ -1.8
CMS1YLR003C RPN10P38886 268 aaKnown RBP3.82□□□□□ -1.8
CMS1YLR003C SNO3P43544 222 aa3.82□□□□□ -1.8
CMS1YLR003C LEU2P04173 364 aaPredicted RBP3.81□□□□□ -1.8
CMS1YLR003C MRPL9P31334 269 aa3.81□□□□□ -1.8
CMS1YLR003C JHD1P40034 492 aa3.81□□□□□ -1.8
CMS1YLR003C YIL077CP40508 320 aa3.81□□□□□ -1.8
CMS1YLR003C NUP53Q03790 475 aa3.81□□□□□ -1.8
CMS1YLR003C ERR1P0CX10 437 aa3.8□□□□□ -1.8
CMS1YLR003C ERR2P0CX11 437 aa3.8□□□□□ -1.8
CMS1YLR003C GAL11P19659 1081 aa3.8□□□□□ -1.8
CMS1YLR003C MTC2P34246 357 aa3.8□□□□□ -1.8
CMS1YLR003C MCD4P36051 919 aa3.8□□□□□ -1.8
CMS1YLR003C YKR051WP36142 418 aa3.8□□□□□ -1.8
CMS1YLR003C PCL10P53124 433 aa3.8□□□□□ -1.8
CMS1YLR003C RSC9Q03124 581 aa3.8□□□□□ -1.8
CMS1YLR003C RPN7Q06103 429 aaKnown RBP3.8□□□□□ -1.8
CMS1YLR003C PMA2P19657 947 aa3.79□□□□□ -1.8
CMS1YLR003C YKR018CP36114 725 aa3.79□□□□□ -1.8
CMS1YLR003C DAK1P54838 584 aaKnown RBP3.79□□□□□ -1.8
CMS1YLR003C YFT2Q06676 274 aa3.79□□□□□ -1.8
CMS1YLR003C ELF1P36053 145 aa3.78□□□□□ -1.8
CMS1YLR003C APN2P38207 520 aa3.78□□□□□ -1.8
CMS1YLR003C SET2P46995 733 aaKnown RBP3.78□□□□□ -1.8
CMS1YLR003C MAL11P53048 616 aa3.78□□□□□ -1.8
CMS1YLR003C CDC53Q12018 815 aaKnown RBP3.78□□□□□ -1.8
CMS1YLR003C POM34Q12445 299 aa3.78□□□□□ -1.8
CMS1YLR003C YOR111WQ99210 232 aa3.78□□□□□ -1.8
CMS1YLR003C HEM1P09950 548 aaPredicted RBP3.77□□□□□ -1.81
CMS1YLR003C COS111P38308 924 aa3.77□□□□□ -1.81
CMS1YLR003C RIM4P38741 713 aa3.77□□□□□ -1.81
CMS1YLR003C GDH3P39708 457 aa3.77□□□□□ -1.81
CMS1YLR003C YJL049WP47048 450 aa3.77□□□□□ -1.81
CMS1YLR003C LEE1Q02799 301 aaKnown RBP3.77□□□□□ -1.81
CMS1YLR003C IZH3Q07959 543 aa3.77□□□□□ -1.81
CMS1YLR003C SEC15P22224 910 aa3.76□□□□□ -1.81
CMS1YLR003C MIH1P23748 554 aa3.76□□□□□ -1.81
CMS1YLR003C APD1P38281 316 aa3.76□□□□□ -1.81
CMS1YLR003C YAT2P40017 923 aa3.76□□□□□ -1.81
CMS1YLR003C ARP4P80428 489 aa3.76□□□□□ -1.81
CMS1YLR003C TRS23Q03784 219 aa3.76□□□□□ -1.81
CMS1YLR003C STO1P34160 861 aaKnown RBP3.75□□□□□ -1.81
CMS1YLR003C SNP1Q00916 300 aaPredicted RBP3.75□□□□□ -1.81
CMS1YLR003C ZPS1Q12512 249 aa3.75□□□□□ -1.81
CMS1YLR003C RPL7AP05737 244 aaKnown RBP3.74□□□□□ -1.81
CMS1YLR003C RPC34P32910 317 aa3.74□□□□□ -1.81
CMS1YLR003C HSL7P38274 827 aa3.74□□□□□ -1.81
CMS1YLR003C THI6P41835 540 aa3.74□□□□□ -1.81
CMS1YLR003C NNF1P47149 201 aa3.74□□□□□ -1.81
CMS1YLR003C IDP3P53982 420 aaKnown RBP3.74□□□□□ -1.81
CMS1YLR003C NSE3Q05541 303 aa3.74□□□□□ -1.81
CMS1YLR003C RPL7BQ12213 244 aaKnown RBP3.74□□□□□ -1.81
CMS1YLR003C YPR089WO13585 888 aa3.73□□□□□ -1.81
CMS1YLR003C CDC9P04819 755 aa3.73□□□□□ -1.81
CMS1YLR003C AQY1P0CD91 305 aa3.73□□□□□ -1.81
CMS1YLR003C MEF1P25039 761 aa3.73□□□□□ -1.81
CMS1YLR003C TIM23P32897 222 aa3.73□□□□□ -1.81
CMS1YLR003C AKL1P38080 1108 aaKnown RBP3.73□□□□□ -1.81
CMS1YLR003C PIH1P38768 344 aa3.73□□□□□ -1.81
CMS1YLR003C ISA1Q07821 250 aaPredicted RBP3.73□□□□□ -1.81
CMS1YLR003C CRC1Q12289 327 aa3.73□□□□□ -1.81
CMS1YLR003C URE2P23202 354 aaKnown RBP3.72□□□□□ -1.81
CMS1YLR003C CAF16P43569 289 aa3.72□□□□□ -1.81
CMS1YLR003C YAP1P19880 650 aaKnown RBP3.71□□□□□ -1.82
CMS1YLR003C KIN82P25341 720 aa3.71□□□□□ -1.82
CMS1YLR003C SRP40P32583 406 aaPredicted RBP3.71□□□□□ -1.82
CMS1YLR003C YJL043WP47053 257 aa3.71□□□□□ -1.82
CMS1YLR003C BRE5P53741 515 aaKnown RBP3.71□□□□□ -1.82
CMS1YLR003C NHX1Q04121 633 aa3.71□□□□□ -1.82
CMS1YLR003C SCW10Q04951 389 aa3.71□□□□□ -1.82
CMS1YLR003C CPA2P03965 1118 aaKnown RBP3.7□□□□□ -1.82
CMS1YLR003C CIT2P08679 460 aa3.7□□□□□ -1.82
CMS1YLR003C YKL091CP33324 310 aaKnown RBP3.7□□□□□ -1.82
CMS1YLR003C BST1P43571 1029 aa3.7□□□□□ -1.82
CMS1YLR003C ENP2P48234 707 aaKnown RBP3.7□□□□□ -1.82
CMS1YLR003C ENT2Q05785 613 aa3.7□□□□□ -1.82
CMS1YLR003C YOL098CQ12496 1037 aa3.7□□□□□ -1.82
CMS1YLR003C YMR084WA2P2R3 262 aa3.69□□□□□ -1.82
CMS1YLR003C MGM1P32266 881 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms