RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	VPS54	Q12071	889 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	STT4	P37297	1900 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	HEM15	P16622	393 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	VBA3	P25594	458 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	RAD5	P32849	1169 aa	Predicted RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	VBA5	P36172	582 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	SAK1	P38990	1142 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	KTR7	P40504	517 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	ENT3	P47160	408 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	SPP1	Q03012	353 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	ECM38	Q05902	660 aa	Predicted RBP	4.12	□□□□□ -1.75
LOS1	YKL205W	BSP1	Q06604	576 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	PIB1	Q06651	286 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	TLG2	Q08144	397 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	AIM39	Q08223	395 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	VPS5	Q92331	675 aa		4.12	□□□□□ -1.75
LOS1	YKL205W	CDC33	P07260	213 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	ADH4	P10127	382 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	PYC1	P11154	1178 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	YBL055C	P34220	418 aa	Predicted RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	TIF5	P38431	405 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	PRK1	P40494	810 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	SNG1	P46950	547 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	RTT101	P47050	842 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	PET130	P47065	347 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	HSH155	P49955	971 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	UME1	Q03010	460 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	INP2	Q03824	705 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	MTF2	P10849	440 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	FPR1	P20081	114 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	FRE1	P32791	686 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	YME1	P32795	747 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	HSP78	P33416	811 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	STO1	P34160	861 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	SHE3	P38272	425 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	LCP5	P40079	357 aa	Predicted RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	MEP1	P40260	492 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	FMP25	Q08023	583 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	OSH2	Q12451	1283 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	IZH4	Q99393	312 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	SPT21	P35209	758 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	APM3	P38153	483 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	GGA2	P38817	585 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	CCT4	P39078	528 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	MNN1	P39106	762 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	STR3	P53101	465 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	VPS60	Q03390	229 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	UTP14	Q04500	899 aa	Known RBP	4.11	□□□□□ -1.75
LOS1	YKL205W	IVY1	Q04934	453 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	SLX4	Q12098	748 aa		4.11	□□□□□ -1.75
LOS1	YKL205W	HMG2	P12684	1045 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
LOS1	YKL205W	RIM1	P32445	135 aa	Known RBP	4.1	□□□□□ -1.75
LOS1	YKL205W	YBL036C	P38197	257 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	SFB3	P38810	929 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	CIN4	P39110	191 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	PRM9	P39551	298 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	RFX1	P48743	811 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	SPP2	Q02521	185 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	MRI1	Q06489	411 aa	Known RBP	4.1	□□□□□ -1.75
LOS1	YKL205W	GPM2	Q12008	311 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	YLR462W	O13556	202 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	PLC1	P32383	869 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	MAC1	P35192	417 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	CDC27	P38042	758 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	YHL049C	P38722	271 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	YEL075C	P39972	122 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	YER189W	P40104	122 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	YFL064C	P43540	174 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	SET2	P46995	733 aa	Known RBP	4.1	□□□□□ -1.75
LOS1	YKL205W	YNL011C	P53980	444 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	SNU56	Q03782	492 aa	Known RBP	4.1	□□□□□ -1.75
LOS1	YKL205W	ABP140	Q08641	628 aa	Known RBP	4.1	□□□□□ -1.75
LOS1	YKL205W	YBL111C	Q3E7Y5	667 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	FRT1	Q99332	602 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	RAD10	P06838	210 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	SMC1	P32908	1225 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	PCH2	P38126	564 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	CRP1	P38845	465 aa	Known RBP	4.1	□□□□□ -1.75
LOS1	YKL205W	JHD1	P40034	492 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	APT1	P49435	187 aa	Known RBP	4.1	□□□□□ -1.75
LOS1	YKL205W	RIM8	P53179	542 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	SPC98	P53540	846 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	VPS9	P54787	451 aa		4.1	□□□□□ -1.75
LOS1	YKL205W	PTC3	P34221	468 aa	Known RBP	4.09	□□□□□ -1.75
LOS1	YKL205W	EXO5	P38289	585 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	RGD1	P38339	666 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	RPH1	P39956	796 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	BUD13	P46947	266 aa	Predicted RBP	4.09	□□□□□ -1.75
LOS1	YKL205W	TCB2	P48231	1178 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	CDC55	Q00362	526 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	RCR2	Q03446	210 aa	Known RBP	4.09	□□□□□ -1.75
LOS1	YKL205W	ARO80	Q04052	950 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	ESC2	Q06340	456 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	MAG2	Q06436	670 aa	Known RBP	4.09	□□□□□ -1.75
LOS1	YKL205W	YLR413W	Q06689	675 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	MAM3	Q12296	706 aa		4.09	□□□□□ -1.75
LOS1	YKL205W	AMD2	P22580	549 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	RPC25	P35718	212 aa		4.09	□□□□□ -1.76
LOS1	YKL205W	YBR053C	P38235	358 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms