RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W MCM5P29496 775 aaKnown RBP5.87□□□□□ -1.47
TIM54YJL054W MNR2P35724 969 aa5.87□□□□□ -1.47
TIM54YJL054W HMT1P38074 348 aa5.87□□□□□ -1.47
TIM54YJL054W PPS1P38148 807 aa5.87□□□□□ -1.47
TIM54YJL054W PEX28P38848 579 aa5.87□□□□□ -1.47
TIM54YJL054W YIR014WP40570 242 aa5.87□□□□□ -1.47
TIM54YJL054W LSB6P42951 607 aa5.87□□□□□ -1.47
TIM54YJL054W NUT1P53114 1132 aa5.87□□□□□ -1.47
TIM54YJL054W UTP14Q04500 899 aaKnown RBP5.87□□□□□ -1.47
TIM54YJL054W SHS1Q07657 551 aa5.87□□□□□ -1.47
TIM54YJL054W PLP2Q12017 286 aa5.87□□□□□ -1.47
TIM54YJL054W CDC53Q12018 815 aaKnown RBP5.87□□□□□ -1.47
TIM54YJL054W REC8Q12188 680 aa5.87□□□□□ -1.47
TIM54YJL054W PUS1Q12211 544 aaKnown RBP5.87□□□□□ -1.47
TIM54YJL054W TOR2P32600 2474 aaKnown RBP5.87□□□□□ -1.47
TIM54YJL054W PHO8P11491 566 aa5.86□□□□□ -1.47
TIM54YJL054W BIK1P11709 440 aa5.86□□□□□ -1.47
TIM54YJL054W HIR1P32479 840 aa5.86□□□□□ -1.47
TIM54YJL054W PEX2P32800 271 aa5.86□□□□□ -1.47
TIM54YJL054W TRM2P33753 639 aa5.86□□□□□ -1.47
TIM54YJL054W RFT1P38206 574 aaPredicted RBP5.86□□□□□ -1.47
TIM54YJL054W ASN1P49089 572 aaKnown RBP5.86□□□□□ -1.47
TIM54YJL054W STB4P50104 949 aa5.86□□□□□ -1.47
TIM54YJL054W YNR065CP53751 1116 aa5.86□□□□□ -1.47
TIM54YJL054W CWC21Q03375 135 aaKnown RBP5.86□□□□□ -1.47
TIM54YJL054W HCR1Q05775 265 aaKnown RBP5.86□□□□□ -1.47
TIM54YJL054W SGO1Q08490 590 aa5.86□□□□□ -1.47
TIM54YJL054W SOG2Q08817 791 aa5.86□□□□□ -1.47
TIM54YJL054W RRD2Q12461 358 aa5.86□□□□□ -1.47
TIM54YJL054W CIT2P08679 460 aa5.85□□□□□ -1.47
TIM54YJL054W SSB1P11484 613 aaKnown RBP5.85□□□□□ -1.47
TIM54YJL054W BET2P20133 325 aa5.85□□□□□ -1.47
TIM54YJL054W DAL7P21826 554 aa5.85□□□□□ -1.47
TIM54YJL054W NPR1P22211 790 aa5.85□□□□□ -1.47
TIM54YJL054W PEX1P24004 1043 aa5.85□□□□□ -1.47
TIM54YJL054W IMG2P25642 146 aaPredicted RBP5.85□□□□□ -1.47
TIM54YJL054W YEL1P34225 687 aa5.85□□□□□ -1.47
TIM54YJL054W RIM4P38741 713 aa5.85□□□□□ -1.47
TIM54YJL054W RVS167P39743 482 aaKnown RBP5.85□□□□□ -1.47
TIM54YJL054W SSB2P40150 613 aaKnown RBP5.85□□□□□ -1.47
TIM54YJL054W SIP5P40210 489 aaKnown RBP5.85□□□□□ -1.47
TIM54YJL054W POL31P46957 487 aa5.85□□□□□ -1.47
TIM54YJL054W BFA1P47113 574 aa5.85□□□□□ -1.47
TIM54YJL054W CCM1P48237 864 aaPredicted RBP5.85□□□□□ -1.47
TIM54YJL054W STP1Q00947 519 aa5.85□□□□□ -1.47
TIM54YJL054W TDA6Q06466 467 aa5.85□□□□□ -1.47
TIM54YJL054W PSR2Q07949 397 aa5.85□□□□□ -1.47
TIM54YJL054W SGT2Q12118 346 aaKnown RBP5.85□□□□□ -1.47
TIM54YJL054W CTF3Q12748 733 aa5.85□□□□□ -1.47
TIM54YJL054W SPE1P08432 466 aa5.84□□□□□ -1.47
TIM54YJL054W RPL4AP10664 362 aaKnown RBP5.84□□□□□ -1.47
TIM54YJL054W TAF13P11747 167 aa5.84□□□□□ -1.47
TIM54YJL054W HMG2P12684 1045 aa5.84□□□□□ -1.47
TIM54YJL054W KGD2P19262 463 aaPredicted RBP5.84□□□□□ -1.47
TIM54YJL054W PGS1P25578 521 aa5.84□□□□□ -1.47
TIM54YJL054W UBP5P39944 805 aa5.84□□□□□ -1.47
TIM54YJL054W NPP2P39997 493 aa5.84□□□□□ -1.47
TIM54YJL054W FYV8P46949 817 aaKnown RBP5.84□□□□□ -1.47
TIM54YJL054W RPL4BP49626 362 aaKnown RBP5.84□□□□□ -1.47
TIM54YJL054W HSH155P49955 971 aaKnown RBP5.84□□□□□ -1.47
TIM54YJL054W NBP1P52919 319 aaPredicted RBP5.84□□□□□ -1.47
TIM54YJL054W PMT7Q06644 662 aa5.84□□□□□ -1.47
TIM54YJL054W TCO89Q08921 799 aa5.84□□□□□ -1.47
TIM54YJL054W ASP3-2P0CX77 362 aa5.83□□□□□ -1.48
TIM54YJL054W ASP3-3P0CX78 362 aa5.83□□□□□ -1.48
TIM54YJL054W ASP3-4P0CX79 362 aa5.83□□□□□ -1.48
TIM54YJL054W ASP3-1P0CZ17 362 aa5.83□□□□□ -1.48
TIM54YJL054W MAS1P10507 462 aa5.83□□□□□ -1.48
TIM54YJL054W VPS3P23643 1011 aa5.83□□□□□ -1.48
TIM54YJL054W CDC15P27636 974 aa5.83□□□□□ -1.48
TIM54YJL054W MCM2P29469 868 aa5.83□□□□□ -1.48
TIM54YJL054W PEP7P32609 515 aa5.83□□□□□ -1.48
TIM54YJL054W YBR284WP38150 797 aa5.83□□□□□ -1.48
TIM54YJL054W PCM1P38628 557 aaKnown RBP5.83□□□□□ -1.48
TIM54YJL054W YHR054CP38780 354 aa5.83□□□□□ -1.48
TIM54YJL054W YFL066CP43538 392 aa5.83□□□□□ -1.48
TIM54YJL054W SPC98P53540 846 aa5.83□□□□□ -1.48
TIM54YJL054W ADA2Q02336 434 aa5.83□□□□□ -1.48
TIM54YJL054W MSH6Q03834 1242 aa5.83□□□□□ -1.48
TIM54YJL054W HRQ1Q05549 1077 aa5.83□□□□□ -1.48
TIM54YJL054W IRC10Q08118 586 aa5.83□□□□□ -1.48
TIM54YJL054W SLP1Q12232 587 aa5.83□□□□□ -1.48
TIM54YJL054W MED1Q12321 566 aa5.83□□□□□ -1.48
TIM54YJL054W CMR1Q12510 522 aaKnown RBP5.83□□□□□ -1.48
TIM54YJL054W TY4B-PA0A0B7P3V8 1104 aa5.82□□□□□ -1.48
TIM54YJL054W GAL80P04387 435 aa5.82□□□□□ -1.48
TIM54YJL054W RPL22AP05749 121 aaKnown RBP5.82□□□□□ -1.48
TIM54YJL054W NAT1P12945 854 aaKnown RBP5.82□□□□□ -1.48
TIM54YJL054W MUD1P32605 298 aaKnown RBP5.82□□□□□ -1.48
TIM54YJL054W YKL097CP34245 136 aa5.82□□□□□ -1.48
TIM54YJL054W RRM3P38766 723 aa5.82□□□□□ -1.48
TIM54YJL054W LCB2P40970 561 aa5.82□□□□□ -1.48
TIM54YJL054W LEM3P42838 414 aa5.82□□□□□ -1.48
TIM54YJL054W NOP13P53883 403 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
TIM54YJL054W SNU56Q03782 492 aaKnown RBP5.82□□□□□ -1.48
TIM54YJL054W TIF35Q04067 274 aaKnown RBP5.82□□□□□ -1.48
TIM54YJL054W RRP15Q06511 250 aaPredicted RBP5.82□□□□□ -1.48
TIM54YJL054W CDD1Q06549 142 aa5.82□□□□□ -1.48
TIM54YJL054W TY4A-HQ6Q5P6 413 aa5.82□□□□□ -1.48
TIM54YJL054W APM4Q99186 491 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 106.5 ms