RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W YPT52P36018 234 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W VPS51P36116 164 aa3.65□□□□□ -1.82
NSP1YJL041W SHM1P37292 490 aaPredicted RBP3.65□□□□□ -1.82
NSP1YJL041W TDA3P38758 523 aa3.65□□□□□ -1.82
NSP1YJL041W RRF1P38771 230 aa3.65□□□□□ -1.82
NSP1YJL041W RTC3P38804 111 aaPredicted RBP3.65□□□□□ -1.82
NSP1YJL041W PIK1P39104 1066 aa3.65□□□□□ -1.82
NSP1YJL041W RPS26AP39938 119 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W RPS26BP39939 119 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W UTP25P40498 721 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W SPO22P40511 975 aa3.65□□□□□ -1.82
NSP1YJL041W DBP9Q06218 594 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W UBX5Q06682 500 aa3.65□□□□□ -1.82
NSP1YJL041W DTD1Q07648 150 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W INP54Q08227 384 aaKnown RBP3.65□□□□□ -1.82
NSP1YJL041W RTT10Q08924 1013 aa3.65□□□□□ -1.82
NSP1YJL041W POM152P39685 1337 aa3.65□□□□□ -1.83
NSP1YJL041W SNA3P14359 133 aa3.65□□□□□ -1.83
NSP1YJL041W RGP1P16664 663 aa3.65□□□□□ -1.83
NSP1YJL041W DAP2P18962 818 aa3.65□□□□□ -1.83
NSP1YJL041W VPS3P23643 1011 aa3.65□□□□□ -1.83
NSP1YJL041W ITR1P30605 584 aa3.65□□□□□ -1.83
NSP1YJL041W ZIP1P31111 875 aa3.65□□□□□ -1.83
NSP1YJL041W LRG1P35688 1017 aa3.65□□□□□ -1.83
NSP1YJL041W TRZ1P36159 838 aaPredicted RBP3.65□□□□□ -1.83
NSP1YJL041W NCL1P38205 684 aaKnown RBP3.65□□□□□ -1.83
NSP1YJL041W DSS1P39112 969 aa3.65□□□□□ -1.83
NSP1YJL041W MRX1P40050 688 aa3.65□□□□□ -1.83
NSP1YJL041W DOT6P40059 670 aaKnown RBP3.65□□□□□ -1.83
NSP1YJL041W SCS2P40075 244 aaKnown RBP3.65□□□□□ -1.83
NSP1YJL041W ROG3P43602 733 aa3.65□□□□□ -1.83
NSP1YJL041W YJR079WP47126 109 aa3.65□□□□□ -1.83
NSP1YJL041W YGR111WP53265 400 aa3.65□□□□□ -1.83
NSP1YJL041W NAM8Q00539 523 aaKnown RBP3.65□□□□□ -1.83
NSP1YJL041W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
NSP1YJL041W HMO1Q03973 246 aaKnown RBP3.65□□□□□ -1.83
NSP1YJL041W TY1A-MR1Q04215 440 aa3.65□□□□□ -1.83
NSP1YJL041W RBA50Q04418 439 aa3.65□□□□□ -1.83
NSP1YJL041W SPC2Q04969 178 aa3.65□□□□□ -1.83
NSP1YJL041W PDR8Q06149 701 aa3.65□□□□□ -1.83
NSP1YJL041W SWA2Q06677 668 aa3.65□□□□□ -1.83
NSP1YJL041W NSI1Q12457 570 aa3.65□□□□□ -1.83
NSP1YJL041W ARP6Q12509 438 aa3.65□□□□□ -1.83
NSP1YJL041W DDP1Q99321 188 aaKnown RBP3.65□□□□□ -1.83
NSP1YJL041W YBT1P32386 1661 aa3.65□□□□□ -1.83
NSP1YJL041W DNF3Q12674 1656 aa3.65□□□□□ -1.83
NSP1YJL041W UTP10P42945 1769 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W CDC19P00549 500 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W HXK1P04806 485 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W GCD1P09032 578 aaPredicted RBP3.64□□□□□ -1.83
NSP1YJL041W CMP2P14747 604 aa3.64□□□□□ -1.83
NSP1YJL041W GLK1P17709 500 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W PTP1P25044 335 aa3.64□□□□□ -1.83
NSP1YJL041W CBF2P32504 956 aa3.64□□□□□ -1.83
NSP1YJL041W APM2P38700 605 aa3.64□□□□□ -1.83
NSP1YJL041W CAF130P53280 1122 aaPredicted RBP3.64□□□□□ -1.83
NSP1YJL041W YNL193WP53870 558 aa3.64□□□□□ -1.83
NSP1YJL041W YNL058CP53947 316 aa3.64□□□□□ -1.83
NSP1YJL041W COG6P53959 839 aa3.64□□□□□ -1.83
NSP1YJL041W ERO1Q03103 563 aa3.64□□□□□ -1.83
NSP1YJL041W RSM24Q03976 319 aa3.64□□□□□ -1.83
NSP1YJL041W DAL4Q04895 635 aa3.64□□□□□ -1.83
NSP1YJL041W HPF1Q05164 967 aa3.64□□□□□ -1.83
NSP1YJL041W RGC1Q06108 1083 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W MCP2Q06567 569 aa3.64□□□□□ -1.83
NSP1YJL041W GIC2Q06648 383 aa3.64□□□□□ -1.83
NSP1YJL041W YDL114WQ07530 308 aa3.64□□□□□ -1.83
NSP1YJL041W DIS3Q08162 1001 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W SSP2Q08646 371 aa3.64□□□□□ -1.83
NSP1YJL041W WRS1Q12109 432 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W YLR278CQ05854 1341 aa3.64□□□□□ -1.83
NSP1YJL041W TUB1P09733 447 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W RED1P14291 827 aa3.64□□□□□ -1.83
NSP1YJL041W SEC18P18759 758 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W PGS1P25578 521 aa3.64□□□□□ -1.83
NSP1YJL041W PTR2P32901 601 aa3.64□□□□□ -1.83
NSP1YJL041W PRP40P33203 583 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W SHU2P38957 223 aa3.64□□□□□ -1.83
NSP1YJL041W MTW1P39731 289 aa3.64□□□□□ -1.83
NSP1YJL041W YIL165CP40446 119 aa3.64□□□□□ -1.83
NSP1YJL041W MKT1P40850 830 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W SOL4P53315 255 aa3.64□□□□□ -1.83
NSP1YJL041W CWC24P53769 259 aa3.64□□□□□ -1.83
NSP1YJL041W MSH6Q03834 1242 aa3.64□□□□□ -1.83
NSP1YJL041W SPO71Q03868 1245 aa3.64□□□□□ -1.83
NSP1YJL041W EMI2Q04409 500 aaKnown RBP3.64□□□□□ -1.83
NSP1YJL041W SPR28Q04921 423 aa3.64□□□□□ -1.83
NSP1YJL041W FMP42Q04991 504 aa3.64□□□□□ -1.83
NSP1YJL041W VPS36Q06696 566 aa3.64□□□□□ -1.83
NSP1YJL041W SNU23Q12368 194 aaPredicted RBP3.64□□□□□ -1.83
NSP1YJL041W SPO21Q12411 609 aa3.64□□□□□ -1.83
NSP1YJL041W YOL098CQ12496 1037 aa3.64□□□□□ -1.83
NSP1YJL041W SET6Q12529 373 aa3.64□□□□□ -1.83
NSP1YJL041W SNT2P53127 1403 aa3.63□□□□□ -1.83
NSP1YJL041W PGI1P12709 554 aaKnown RBP3.63□□□□□ -1.83
NSP1YJL041W IME1P21190 360 aa3.63□□□□□ -1.83
NSP1YJL041W CLB2P24869 491 aa3.63□□□□□ -1.83
NSP1YJL041W KIP1P28742 1111 aa3.63□□□□□ -1.83
NSP1YJL041W VAM7P32912 316 aa3.63□□□□□ -1.83
NSP1YJL041W ATG19P35193 415 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms