RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W MEX67Q99257 599 aaKnown RBP6.82□□□□□ -1.32
PRE3YJL001W TUF1P02992 437 aaKnown RBP6.81□□□□□ -1.32
PRE3YJL001W RPL4AP10664 362 aaKnown RBP6.81□□□□□ -1.32
PRE3YJL001W FUS1P11710 512 aa6.81□□□□□ -1.32
PRE3YJL001W CDC34P14682 295 aa6.81□□□□□ -1.32
PRE3YJL001W DIT1P21623 536 aa6.81□□□□□ -1.32
PRE3YJL001W PDE1P22434 369 aa6.81□□□□□ -1.32
PRE3YJL001W RPC53P25441 422 aa6.81□□□□□ -1.32
PRE3YJL001W PEX34P25584 144 aa6.81□□□□□ -1.32
PRE3YJL001W YIR007WP40566 764 aa6.81□□□□□ -1.32
PRE3YJL001W RPL4BP49626 362 aaKnown RBP6.81□□□□□ -1.32
PRE3YJL001W TAM41P53230 385 aa6.81□□□□□ -1.32
PRE3YJL001W SDA1P53313 767 aaKnown RBP6.81□□□□□ -1.32
PRE3YJL001W SFB2P53953 876 aa6.81□□□□□ -1.32
PRE3YJL001W YHM2Q04013 314 aa6.81□□□□□ -1.32
PRE3YJL001W ADY4Q05955 493 aa6.81□□□□□ -1.32
PRE3YJL001W DCS2Q12123 353 aa6.81□□□□□ -1.32
PRE3YJL001W MSB2P32334 1306 aa6.8□□□□□ -1.32
PRE3YJL001W ALG1P16661 449 aa6.8□□□□□ -1.32
PRE3YJL001W NPR1P22211 790 aa6.8□□□□□ -1.32
PRE3YJL001W ECM32P32644 1121 aaKnown RBP6.8□□□□□ -1.32
PRE3YJL001W YSC83P32792 385 aa6.8□□□□□ -1.32
PRE3YJL001W MMS4P38257 691 aa6.8□□□□□ -1.32
PRE3YJL001W NUP82P40368 713 aa6.8□□□□□ -1.32
PRE3YJL001W STP1Q00947 519 aa6.8□□□□□ -1.32
PRE3YJL001W VTC3Q02725 835 aa6.8□□□□□ -1.32
PRE3YJL001W SPE3Q12074 293 aaKnown RBP6.8□□□□□ -1.32
PRE3YJL001W CMR1Q12510 522 aaKnown RBP6.8□□□□□ -1.32
PRE3YJL001W RPS9AO13516 197 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W GCR1P07261 785 aa6.79□□□□□ -1.32
PRE3YJL001W FRS2P15625 503 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W PFK1P16861 987 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W FPS1P23900 669 aa6.79□□□□□ -1.32
PRE3YJL001W PRR1P28708 518 aa6.79□□□□□ -1.32
PRE3YJL001W NAM7P30771 971 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W MNN4P36044 1178 aa6.79□□□□□ -1.32
PRE3YJL001W YHL017WP38745 532 aa6.79□□□□□ -1.32
PRE3YJL001W UBP5P39944 805 aa6.79□□□□□ -1.32
PRE3YJL001W SIP5P40210 489 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W BUD6P41697 788 aa6.79□□□□□ -1.32
PRE3YJL001W LSB3P43603 459 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W YJL049WP47048 450 aa6.79□□□□□ -1.32
PRE3YJL001W FAA4P47912 694 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W ORC5P50874 479 aa6.79□□□□□ -1.32
PRE3YJL001W CWC21Q03375 135 aaKnown RBP6.79□□□□□ -1.32
PRE3YJL001W YML053CQ04978 212 aa6.79□□□□□ -1.32
PRE3YJL001W SHS1Q07657 551 aa6.79□□□□□ -1.32
PRE3YJL001W RTT10Q08924 1013 aa6.79□□□□□ -1.32
PRE3YJL001W GLO4Q12320 285 aa6.79□□□□□ -1.32
PRE3YJL001W PTC5Q12511 572 aa6.79□□□□□ -1.32
PRE3YJL001W HSP82P02829 709 aaKnown RBP6.78□□□□□ -1.32
PRE3YJL001W GAL80P04387 435 aa6.78□□□□□ -1.32
PRE3YJL001W KGD2P19262 463 aaPredicted RBP6.78□□□□□ -1.32
PRE3YJL001W CKA2P19454 339 aa6.78□□□□□ -1.32
PRE3YJL001W TRM2P33753 639 aa6.78□□□□□ -1.32
PRE3YJL001W POL12P38121 705 aaPredicted RBP6.78□□□□□ -1.32
PRE3YJL001W DUG2P38149 878 aa6.78□□□□□ -1.32
PRE3YJL001W SHE10P53075 577 aa6.78□□□□□ -1.32
PRE3YJL001W GUP1P53154 560 aa6.78□□□□□ -1.32
PRE3YJL001W CUZ1P53899 274 aa6.78□□□□□ -1.32
PRE3YJL001W KRE33P53914 1056 aaKnown RBP6.78□□□□□ -1.32
PRE3YJL001W SNU56Q03782 492 aaKnown RBP6.78□□□□□ -1.32
PRE3YJL001W TY1A-MR1Q04215 440 aa6.78□□□□□ -1.32
PRE3YJL001W PDH1Q12428 516 aaKnown RBP6.78□□□□□ -1.32
PRE3YJL001W CTF3Q12748 733 aa6.78□□□□□ -1.32
PRE3YJL001W HOM2P13663 365 aaKnown RBP6.77□□□□□ -1.33
PRE3YJL001W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
PRE3YJL001W DUT1P33317 147 aa6.77□□□□□ -1.33
PRE3YJL001W FYV8P46949 817 aaKnown RBP6.77□□□□□ -1.33
PRE3YJL001W POL31P46957 487 aa6.77□□□□□ -1.33
PRE3YJL001W ASN1P49089 572 aaKnown RBP6.77□□□□□ -1.33
PRE3YJL001W YNR061CP53747 219 aa6.77□□□□□ -1.33
PRE3YJL001W PEX13P80667 386 aa6.77□□□□□ -1.33
PRE3YJL001W CUR1Q06469 252 aa6.77□□□□□ -1.33
PRE3YJL001W MRL1Q06815 381 aa6.77□□□□□ -1.33
PRE3YJL001W YDL057WQ07379 328 aa6.77□□□□□ -1.33
PRE3YJL001W LEA1Q08963 238 aaPredicted RBP6.77□□□□□ -1.33
PRE3YJL001W CDC53Q12018 815 aaKnown RBP6.77□□□□□ -1.33
PRE3YJL001W CSF1Q12150 2958 aa6.77□□□□□ -1.33
PRE3YJL001W ISY1P21374 235 aaPredicted RBP6.76□□□□□ -1.33
PRE3YJL001W PET10P36139 283 aa6.76□□□□□ -1.33
PRE3YJL001W SFB3P38810 929 aa6.76□□□□□ -1.33
PRE3YJL001W SHU2P38957 223 aa6.76□□□□□ -1.33
PRE3YJL001W THI6P41835 540 aa6.76□□□□□ -1.33
PRE3YJL001W TAF1P46677 1066 aa6.76□□□□□ -1.33
PRE3YJL001W CTF18P49956 741 aa6.76□□□□□ -1.33
PRE3YJL001W YGR053CP53234 283 aa6.76□□□□□ -1.33
PRE3YJL001W TOF1P53840 1238 aa6.76□□□□□ -1.33
PRE3YJL001W ADE12P80210 433 aaKnown RBP6.76□□□□□ -1.33
PRE3YJL001W NOG1Q02892 647 aaKnown RBP6.76□□□□□ -1.33
PRE3YJL001W TMN2Q04562 672 aa6.76□□□□□ -1.33
PRE3YJL001W EIS1Q05050 843 aaKnown RBP6.76□□□□□ -1.33
PRE3YJL001W NBL1Q3E7Y6 73 aa6.76□□□□□ -1.33
PRE3YJL001W TPK1P06244 397 aa6.75□□□□□ -1.33
PRE3YJL001W PRI2P20457 528 aa6.75□□□□□ -1.33
PRE3YJL001W SIR1P21691 654 aa6.75□□□□□ -1.33
PRE3YJL001W STE11P23561 717 aa6.75□□□□□ -1.33
PRE3YJL001W MSH3P25336 1018 aa6.75□□□□□ -1.33
PRE3YJL001W TRK2P28584 889 aa6.75□□□□□ -1.33
PRE3YJL001W SLA2P33338 968 aa6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms