RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W ROG3P43602 733 aa5.5□□□□□ -1.53
UBP7YIL156W IRC5P43610 853 aa5.5□□□□□ -1.53
UBP7YIL156W PRP43P53131 767 aaKnown RBP5.5□□□□□ -1.53
UBP7YIL156W RSA3Q05942 220 aaKnown RBP5.5□□□□□ -1.53
UBP7YIL156W SSN2P38931 1420 aa5.5□□□□□ -1.53
UBP7YIL156W TY1B-NL2Q99337 1749 aaKnown RBP5.5□□□□□ -1.53
UBP7YIL156W CDC26P14724 124 aa5.5□□□□□ -1.53
UBP7YIL156W MCM3P24279 971 aaKnown RBP5.5□□□□□ -1.53
UBP7YIL156W YIL166CP40445 542 aa5.5□□□□□ -1.53
UBP7YIL156W LYS14P40971 790 aa5.5□□□□□ -1.53
UBP7YIL156W YFL054CP43549 646 aa5.5□□□□□ -1.53
UBP7YIL156W BFA1P47113 574 aa5.5□□□□□ -1.53
UBP7YIL156W CTF18P49956 741 aa5.5□□□□□ -1.53
UBP7YIL156W RRP9Q06506 573 aaKnown RBP5.5□□□□□ -1.53
UBP7YIL156W YLL058WQ12198 575 aa5.5□□□□□ -1.53
UBP7YIL156W PHO5P00635 467 aa5.49□□□□□ -1.53
UBP7YIL156W SRP68P38687 599 aaKnown RBP5.49□□□□□ -1.53
UBP7YIL156W MSC7P38694 644 aa5.49□□□□□ -1.53
UBP7YIL156W NPR2P39923 615 aa5.49□□□□□ -1.53
UBP7YIL156W SHR5P41912 237 aa5.49□□□□□ -1.53
UBP7YIL156W YFL052WP43551 465 aa5.49□□□□□ -1.53
UBP7YIL156W NUP85P46673 744 aa5.49□□□□□ -1.53
UBP7YIL156W YGR045CP53229 120 aa5.49□□□□□ -1.53
UBP7YIL156W YMR155WQ03795 547 aa5.49□□□□□ -1.53
UBP7YIL156W VPS15P22219 1454 aa5.49□□□□□ -1.53
UBP7YIL156W SES1P07284 462 aaKnown RBP5.49□□□□□ -1.53
UBP7YIL156W ILS1P09436 1072 aaKnown RBP5.49□□□□□ -1.53
UBP7YIL156W CKA1P15790 372 aa5.49□□□□□ -1.53
UBP7YIL156W CLB4P24871 460 aa5.49□□□□□ -1.53
UBP7YIL156W CBF2P32504 956 aa5.49□□□□□ -1.53
UBP7YIL156W YKR018CP36114 725 aa5.49□□□□□ -1.53
UBP7YIL156W CIR1P42940 261 aa5.49□□□□□ -1.53
UBP7YIL156W YJR098CP47139 656 aa5.49□□□□□ -1.53
UBP7YIL156W KNS1P32350 737 aaPredicted RBP5.48□□□□□ -1.53
UBP7YIL156W CSR1Q06705 408 aaKnown RBP5.48□□□□□ -1.53
UBP7YIL156W NSI1Q12457 570 aa5.48□□□□□ -1.53
UBP7YIL156W SGF29P25554 259 aa5.48□□□□□ -1.53
UBP7YIL156W GIC1P38785 314 aa5.48□□□□□ -1.53
UBP7YIL156W UME6P39001 836 aa5.48□□□□□ -1.53
UBP7YIL156W STT3P39007 718 aaKnown RBP5.48□□□□□ -1.53
UBP7YIL156W SFB2P53953 876 aa5.48□□□□□ -1.53
UBP7YIL156W SSL2Q00578 843 aa5.48□□□□□ -1.53
UBP7YIL156W ADY3Q07732 790 aa5.48□□□□□ -1.53
UBP7YIL156W YOR059CQ08448 450 aaKnown RBP5.48□□□□□ -1.53
UBP7YIL156W YLR149CQ99296 730 aa5.48□□□□□ -1.53
UBP7YIL156W VAS1P07806 1104 aaKnown RBP5.48□□□□□ -1.53
UBP7YIL156W ERG3P32353 365 aa5.48□□□□□ -1.53
UBP7YIL156W MDL2P33311 773 aa5.48□□□□□ -1.53
UBP7YIL156W FKH1P40466 484 aa5.48□□□□□ -1.53
UBP7YIL156W SRT1Q03175 343 aa5.48□□□□□ -1.53
UBP7YIL156W EAR1Q03212 550 aa5.48□□□□□ -1.53
UBP7YIL156W SNO4Q04902 237 aa5.48□□□□□ -1.53
UBP7YIL156W HSP33Q08914 237 aaKnown RBP5.48□□□□□ -1.53
UBP7YIL156W HSP32Q08992 237 aa5.48□□□□□ -1.53
UBP7YIL156W HAL9Q12180 1030 aa5.48□□□□□ -1.53
UBP7YIL156W OLE1P21147 510 aaKnown RBP5.47□□□□□ -1.53
UBP7YIL156W CBP3P21560 335 aa5.47□□□□□ -1.53
UBP7YIL156W SAP190P36123 1033 aa5.47□□□□□ -1.53
UBP7YIL156W PRK1P40494 810 aa5.47□□□□□ -1.53
UBP7YIL156W LEM3P42838 414 aa5.47□□□□□ -1.53
UBP7YIL156W MTC3P53077 123 aa5.47□□□□□ -1.53
UBP7YIL156W YDR341CQ05506 607 aaKnown RBP5.47□□□□□ -1.53
UBP7YIL156W MET17P06106 444 aa5.47□□□□□ -1.53
UBP7YIL156W PFK2P16862 959 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
UBP7YIL156W RPN3P40016 523 aaKnown RBP5.47□□□□□ -1.53
UBP7YIL156W KHA1P40309 873 aa5.47□□□□□ -1.53
UBP7YIL156W SAE2P46946 345 aa5.47□□□□□ -1.53
UBP7YIL156W CLA4P48562 842 aa5.47□□□□□ -1.53
UBP7YIL156W ELA1P53861 379 aaPredicted RBP5.47□□□□□ -1.53
UBP7YIL156W NOP15P53927 220 aaPredicted RBP5.47□□□□□ -1.53
UBP7YIL156W FCP1Q03254 732 aa5.47□□□□□ -1.53
UBP7YIL156W YPL277CQ08989 487 aa5.47□□□□□ -1.53
UBP7YIL156W RFA1P22336 621 aaKnown RBP5.46□□□□□ -1.53
UBP7YIL156W SET3P36124 751 aa5.46□□□□□ -1.53
UBP7YIL156W YBR138CP38277 524 aa5.46□□□□□ -1.53
UBP7YIL156W SET5P38890 526 aaKnown RBP5.46□□□□□ -1.53
UBP7YIL156W YJR039WP47107 1121 aa5.46□□□□□ -1.53
UBP7YIL156W YPR196WQ06595 470 aa5.46□□□□□ -1.53
UBP7YIL156W YEL076C-AP0CX16 216 aa5.46□□□□□ -1.54
UBP7YIL156W YLR464WP0CX17 216 aa5.46□□□□□ -1.54
UBP7YIL156W POL3P15436 1097 aa5.46□□□□□ -1.54
UBP7YIL156W SSZ1P38788 538 aaKnown RBP5.46□□□□□ -1.54
UBP7YIL156W YEL076CP39971 216 aa5.46□□□□□ -1.54
UBP7YIL156W MAM1P40065 302 aa5.46□□□□□ -1.54
UBP7YIL156W SOK2P53438 785 aaPredicted RBP5.46□□□□□ -1.54
UBP7YIL156W YNL058CP53947 316 aa5.46□□□□□ -1.54
UBP7YIL156W ARP4P80428 489 aa5.46□□□□□ -1.54
UBP7YIL156W SRC1Q03707 834 aa5.46□□□□□ -1.54
UBP7YIL156W DNF3Q12674 1656 aa5.46□□□□□ -1.54
UBP7YIL156W MIS1P09440 975 aaKnown RBP5.46□□□□□ -1.54
UBP7YIL156W ESL2P36168 1195 aa5.46□□□□□ -1.54
UBP7YIL156W GRX3Q03835 250 aa5.46□□□□□ -1.54
UBP7YIL156W SMF3Q12078 473 aaPredicted RBP5.46□□□□□ -1.54
UBP7YIL156W RTK1Q12100 620 aaPredicted RBP5.46□□□□□ -1.54
UBP7YIL156W SFI1Q12369 946 aa5.46□□□□□ -1.54
UBP7YIL156W DBP10Q12389 995 aaKnown RBP5.46□□□□□ -1.54
UBP7YIL156W PMS1P14242 873 aa5.45□□□□□ -1.54
UBP7YIL156W BET2P20133 325 aa5.45□□□□□ -1.54
UBP7YIL156W ARF3P40994 183 aaRIP-Chip data5.45□□□□□ -1.54not detected
UBP7YIL156W ARG3P05150 338 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms