RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C CLB1P24868 471 aa8.02□□□□□ -1.13
SNP1YIL061C EFB1P32471 206 aaKnown RBP8.02□□□□□ -1.13
SNP1YIL061C SLD2P34252 453 aa8.02□□□□□ -1.13
SNP1YIL061C SWC5P38326 303 aa8.02□□□□□ -1.13
SNP1YIL061C POP4P38336 279 aa8.02□□□□□ -1.13
SNP1YIL061C YAP1801P38856 637 aa8.02□□□□□ -1.13
SNP1YIL061C YER186CP40101 306 aa8.02□□□□□ -1.13
SNP1YIL061C TGL3P40308 642 aa8.02□□□□□ -1.13
SNP1YIL061C ATG36P46983 293 aa8.02□□□□□ -1.13
SNP1YIL061C THI7Q05998 598 aa8.02□□□□□ -1.13
SNP1YIL061C TRE1Q08919 783 aa8.02□□□□□ -1.13
SNP1YIL061C YOL087CQ99247 1116 aa8.02□□□□□ -1.13
SNP1YIL061C JIP3O13555 125 aa8.01□□□□□ -1.13
SNP1YIL061C POL3P15436 1097 aa8.01□□□□□ -1.13
SNP1YIL061C CDC10P25342 322 aaKnown RBP8.01□□□□□ -1.13
SNP1YIL061C VBA3P25594 458 aa8.01□□□□□ -1.13
SNP1YIL061C VBA5P36172 582 aa8.01□□□□□ -1.13
SNP1YIL061C CCL1P37366 393 aa8.01□□□□□ -1.13
SNP1YIL061C YBL036CP38197 257 aa8.01□□□□□ -1.13
SNP1YIL061C RRD1P40454 393 aaKnown RBP8.01□□□□□ -1.13
SNP1YIL061C YGR130CP53278 816 aa8.01□□□□□ -1.13
SNP1YIL061C ALG11P53954 548 aaKnown RBP8.01□□□□□ -1.13
SNP1YIL061C SNU56Q03782 492 aaKnown RBP8.01□□□□□ -1.13
SNP1YIL061C CDD1Q06549 142 aa8.01□□□□□ -1.13
SNP1YIL061C AIM39Q08223 395 aa8.01□□□□□ -1.13
SNP1YIL061C MPC54Q08550 464 aa8.01□□□□□ -1.13
SNP1YIL061C CIR2Q08822 631 aa8.01□□□□□ -1.13
SNP1YIL061C NCA2Q12374 616 aa8.01□□□□□ -1.13
SNP1YIL061C TIF6Q12522 245 aaKnown RBP8.01□□□□□ -1.13
SNP1YIL061C SAT4P25333 603 aaKnown RBP8□□□□□ -1.13
SNP1YIL061C SEC1P30619 724 aaKnown RBP8□□□□□ -1.13
SNP1YIL061C ERP2P39704 215 aa8□□□□□ -1.13
SNP1YIL061C DSE1P40077 573 aa8□□□□□ -1.13
SNP1YIL061C KHA1P40309 873 aa8□□□□□ -1.13
SNP1YIL061C YJR054WP47114 497 aa8□□□□□ -1.13
SNP1YIL061C HLJ1P48353 224 aa8□□□□□ -1.13
SNP1YIL061C YNL247WP53852 767 aaKnown RBP8□□□□□ -1.13
SNP1YIL061C YNL108CP53929 270 aa8□□□□□ -1.13
SNP1YIL061C MUK1Q02866 612 aa8□□□□□ -1.13
SNP1YIL061C MZM1Q03429 123 aaPredicted RBP8□□□□□ -1.13
SNP1YIL061C ARO80Q04052 950 aa8□□□□□ -1.13
SNP1YIL061C YMR027WQ04371 470 aa8□□□□□ -1.13
SNP1YIL061C DIS3Q08162 1001 aaKnown RBP8□□□□□ -1.13
SNP1YIL061C PUS1Q12211 544 aaKnown RBP8□□□□□ -1.13
SNP1YIL061C CTF3Q12748 733 aa8□□□□□ -1.13
SNP1YIL061C RTP1Q12751 981 aa8□□□□□ -1.13
SNP1YIL061C MOT1P32333 1867 aa8□□□□□ -1.13
SNP1YIL061C ADE4P04046 510 aaKnown RBP7.99□□□□□ -1.13
SNP1YIL061C ILV2P07342 687 aaKnown RBP7.99□□□□□ -1.13
SNP1YIL061C CYS3P31373 394 aaKnown RBP7.99□□□□□ -1.13
SNP1YIL061C TPS2P31688 896 aaKnown RBP7.99□□□□□ -1.13
SNP1YIL061C LOS1P33418 1100 aaPredicted RBP7.99□□□□□ -1.13
SNP1YIL061C ABZ1P37254 787 aaPredicted RBP7.99□□□□□ -1.13
SNP1YIL061C AGP2P38090 596 aa7.99□□□□□ -1.13
SNP1YIL061C DUG2P38149 878 aa7.99□□□□□ -1.13
SNP1YIL061C YSW1P38280 609 aa7.99□□□□□ -1.13
SNP1YIL061C GEM1P39722 662 aa7.99□□□□□ -1.13
SNP1YIL061C LAM5P43560 674 aa7.99□□□□□ -1.13
SNP1YIL061C ASG7P46993 209 aa7.99□□□□□ -1.13
SNP1YIL061C RSM26P47141 266 aa7.99□□□□□ -1.13
SNP1YIL061C BRE5P53741 515 aaKnown RBP7.99□□□□□ -1.13
SNP1YIL061C NOP13P53883 403 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
SNP1YIL061C CDC55Q00362 526 aa7.99□□□□□ -1.13
SNP1YIL061C CWC21Q03375 135 aaKnown RBP7.99□□□□□ -1.13
SNP1YIL061C PRM6Q04705 352 aa7.99□□□□□ -1.13
SNP1YIL061C FAR8Q05040 523 aa7.99□□□□□ -1.13
SNP1YIL061C TDA5Q06417 326 aaKnown RBP7.99□□□□□ -1.13
SNP1YIL061C FAP7Q12055 197 aaPredicted RBP7.99□□□□□ -1.13
SNP1YIL061C VPS54Q12071 889 aa7.99□□□□□ -1.13
SNP1YIL061C SUT2Q12286 268 aa7.99□□□□□ -1.13
SNP1YIL061C EMP46Q12396 444 aa7.99□□□□□ -1.13
SNP1YIL061C RRD2Q12461 358 aa7.99□□□□□ -1.13
SNP1YIL061C SRV2P17555 526 aaKnown RBP7.98□□□□□ -1.13
SNP1YIL061C BUD2P33314 1104 aa7.98□□□□□ -1.13
SNP1YIL061C DUR3P33413 735 aa7.98□□□□□ -1.13
SNP1YIL061C PTC3P34221 468 aaKnown RBP7.98□□□□□ -1.13
SNP1YIL061C KDX1P36005 433 aa7.98□□□□□ -1.13
SNP1YIL061C SET3P36124 751 aa7.98□□□□□ -1.13
SNP1YIL061C UBX7P38349 436 aa7.98□□□□□ -1.13
SNP1YIL061C FLC2P39719 783 aa7.98□□□□□ -1.13
SNP1YIL061C YIL054WP40524 105 aa7.98□□□□□ -1.13
SNP1YIL061C RGD2P43556 714 aa7.98□□□□□ -1.13
SNP1YIL061C YJR107WP47145 328 aa7.98□□□□□ -1.13
SNP1YIL061C COG6P53959 839 aa7.98□□□□□ -1.13
SNP1YIL061C YNL040WP53960 456 aaPredicted RBP7.98□□□□□ -1.13
SNP1YIL061C YML119WQ03208 357 aa7.98□□□□□ -1.13
SNP1YIL061C TAF9Q05027 157 aa7.98□□□□□ -1.13
SNP1YIL061C CDC73Q06697 393 aa7.98□□□□□ -1.13
SNP1YIL061C TAF10Q12030 206 aa7.98□□□□□ -1.13
SNP1YIL061C AVL9Q12500 764 aa7.98□□□□□ -1.13
SNP1YIL061C VPS5Q92331 675 aa7.98□□□□□ -1.13
SNP1YIL061C YPK1P12688 680 aaKnown RBP7.97□□□□□ -1.13
SNP1YIL061C SLY1P22213 666 aa7.97□□□□□ -1.13
SNP1YIL061C MGT1P26188 188 aa7.97□□□□□ -1.13
SNP1YIL061C MEI4P29467 408 aa7.97□□□□□ -1.13
SNP1YIL061C SRB2P34162 210 aa7.97□□□□□ -1.13
SNP1YIL061C SQT1P35184 431 aa7.97□□□□□ -1.13
SNP1YIL061C MSR1P38714 643 aa7.97□□□□□ -1.13
SNP1YIL061C LYS9P38999 446 aa7.97□□□□□ -1.13
SNP1YIL061C MRX1P40050 688 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 367.8 ms