RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	UME6	P39001	836 aa		4.39	□□□□□ -1.71
SLX8	YER116C	EAF5	P39995	279 aa		4.39	□□□□□ -1.71
SLX8	YER116C	YER010C	P40011	234 aa		4.39	□□□□□ -1.71
SLX8	YER116C	PUG1	P40100	303 aa		4.39	□□□□□ -1.71
SLX8	YER116C	SHE10	P53075	577 aa		4.39	□□□□□ -1.71
SLX8	YER116C	MNP1	P53163	194 aa	Predicted RBP	4.39	□□□□□ -1.71
SLX8	YER116C	SPO1	P53541	631 aa		4.39	□□□□□ -1.71
SLX8	YER116C	VTC3	Q02725	835 aa		4.39	□□□□□ -1.71
SLX8	YER116C	GYL1	Q04322	720 aa		4.39	□□□□□ -1.71
SLX8	YER116C	YDR514C	Q04408	483 aa		4.39	□□□□□ -1.71
SLX8	YER116C	AIM32	Q04689	311 aa		4.39	□□□□□ -1.71
SLX8	YER116C	GAD1	Q04792	585 aa		4.39	□□□□□ -1.71
SLX8	YER116C	YLH47	Q06493	454 aa		4.39	□□□□□ -1.71
SLX8	YER116C	KEL3	Q08979	651 aa	Predicted RBP	4.39	□□□□□ -1.71
SLX8	YER116C	CWC2	Q12046	339 aa	Predicted RBP	4.39	□□□□□ -1.71
SLX8	YER116C	GNT1	Q12096	491 aa		4.39	□□□□□ -1.71
SLX8	YER116C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
SLX8	YER116C	OLE1	P21147	510 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	YCK2	P23292	546 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	MIH1	P23748	554 aa		4.38	□□□□□ -1.71
SLX8	YER116C	ROX1	P25042	368 aa		4.38	□□□□□ -1.71
SLX8	YER116C	SEC65	P29478	273 aa		4.38	□□□□□ -1.71
SLX8	YER116C	SDS22	P36047	338 aa		4.38	□□□□□ -1.71
SLX8	YER116C	PGM2	P37012	569 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	RFC1	P38630	861 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	RTS1	P38903	757 aa		4.38	□□□□□ -1.71
SLX8	YER116C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.38	□□□□□ -1.71	not detected
SLX8	YER116C	YEL025C	P39991	1188 aa		4.38	□□□□□ -1.71
SLX8	YER116C	SCS2	P40075	244 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	SKP2	P42843	763 aa		4.38	□□□□□ -1.71
SLX8	YER116C	ART5	P53244	586 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	VPS9	P54787	451 aa		4.38	□□□□□ -1.71
SLX8	YER116C	ADA2	Q02336	434 aa		4.38	□□□□□ -1.71
SLX8	YER116C	CUS1	Q02554	436 aa	Predicted RBP	4.38	□□□□□ -1.71
SLX8	YER116C	DPB4	Q04603	196 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	PHO92	Q06390	306 aa		4.38	□□□□□ -1.71
SLX8	YER116C	VHS3	Q08438	674 aa		4.38	□□□□□ -1.71
SLX8	YER116C	ENV7	Q12003	364 aa		4.38	□□□□□ -1.71
SLX8	YER116C	APL4	Q12028	832 aa		4.38	□□□□□ -1.71
SLX8	YER116C	YDR215C	Q12240	137 aa		4.38	□□□□□ -1.71
SLX8	YER116C	PDH1	Q12428	516 aa	Known RBP	4.38	□□□□□ -1.71
SLX8	YER116C	RTN2	Q12443	393 aa		4.38	□□□□□ -1.71
SLX8	YER116C	APM4	Q99186	491 aa		4.38	□□□□□ -1.71
SLX8	YER116C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-DR6	P0CX70	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-ER1	P0CX71	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-LR2	P0CX72	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-PL	P0CX73	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-JR1	P0CX74	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-LR3	P0CX75	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-ML2	P0CX76	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	HNM1	P19807	563 aa		4.37	□□□□□ -1.71
SLX8	YER116C	CLB4	P24871	460 aa		4.37	□□□□□ -1.71
SLX8	YER116C	RRP7	P25368	297 aa	Predicted RBP	4.37	□□□□□ -1.71
SLX8	YER116C	KIP1	P28742	1111 aa		4.37	□□□□□ -1.71
SLX8	YER116C	AFG2	P32794	780 aa		4.37	□□□□□ -1.71
SLX8	YER116C	NIP100	P33420	868 aa		4.37	□□□□□ -1.71
SLX8	YER116C	RMA1	P36001	430 aa	Known RBP	4.37	□□□□□ -1.71
SLX8	YER116C	CAB3	P36076	571 aa		4.37	□□□□□ -1.71
SLX8	YER116C	ALG3	P38179	458 aa		4.37	□□□□□ -1.71
SLX8	YER116C	MSC7	P38694	644 aa		4.37	□□□□□ -1.71
SLX8	YER116C	NEM1	P38757	446 aa		4.37	□□□□□ -1.71
SLX8	YER116C	MEF2	P39677	819 aa		4.37	□□□□□ -1.71
SLX8	YER116C	ALY2	P47029	1046 aa		4.37	□□□□□ -1.71
SLX8	YER116C	NIT3	P49954	291 aa		4.37	□□□□□ -1.71
SLX8	YER116C	SGF73	P53165	657 aa		4.37	□□□□□ -1.71
SLX8	YER116C	ENV11	P53246	860 aa		4.37	□□□□□ -1.71
SLX8	YER116C	YML119W	Q03208	357 aa		4.37	□□□□□ -1.71
SLX8	YER116C	CWC21	Q03375	135 aa	Known RBP	4.37	□□□□□ -1.71
SLX8	YER116C	UTP5	Q04177	643 aa	Known RBP	4.37	□□□□□ -1.71
SLX8	YER116C	ARP9	Q05123	467 aa		4.37	□□□□□ -1.71
SLX8	YER116C	MLH2	Q07980	695 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-GR1	Q12085	440 aa		4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.37	□□□□□ -1.71
SLX8	YER116C	TY1A-OL	Q92392	440 aa	Known RBP	4.37	□□□□□ -1.71
SLX8	YER116C	PHO5	P00635	467 aa		4.36	□□□□□ -1.71
SLX8	YER116C	GCN4	P03069	281 aa		4.36	□□□□□ -1.71
SLX8	YER116C	CPA2	P03965	1118 aa	Known RBP	4.36	□□□□□ -1.71
SLX8	YER116C	MIS1	P09440	975 aa	Known RBP	4.36	□□□□□ -1.71
SLX8	YER116C	ADH4	P10127	382 aa		4.36	□□□□□ -1.71
SLX8	YER116C	STE50	P25344	346 aa		4.36	□□□□□ -1.71
SLX8	YER116C	SED4	P25365	1065 aa		4.36	□□□□□ -1.71
SLX8	YER116C	LAS1	P36146	502 aa	Predicted RBP	4.36	□□□□□ -1.71
SLX8	YER116C	ATG14	P38270	344 aa		4.36	□□□□□ -1.71
SLX8	YER116C	RGD1	P38339	666 aa		4.36	□□□□□ -1.71
SLX8	YER116C	TIF5	P38431	405 aa	Known RBP	4.36	□□□□□ -1.71
SLX8	YER116C	GCD10	P41814	478 aa		4.36	□□□□□ -1.71
SLX8	YER116C	SLS1	P42900	643 aa		4.36	□□□□□ -1.71
SLX8	YER116C	CCM1	P48237	864 aa	Predicted RBP	4.36	□□□□□ -1.71
SLX8	YER116C	CTF18	P49956	741 aa		4.36	□□□□□ -1.71
SLX8	YER116C	SKP1	P52286	194 aa		4.36	□□□□□ -1.71
SLX8	YER116C	YPL107W	Q02873	248 aa		4.36	□□□□□ -1.71
SLX8	YER116C	ARV1	Q06541	321 aa		4.36	□□□□□ -1.71
SLX8	YER116C	CSR1	Q06705	408 aa	Known RBP	4.36	□□□□□ -1.71
SLX8	YER116C	RIX7	Q07844	837 aa	Known RBP	4.36	□□□□□ -1.71
SLX8	YER116C	PSF3	Q12146	194 aa		4.36	□□□□□ -1.71
SLX8	YER116C	HOM2	P13663	365 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	MCM3	P24279	971 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	LCB1	P25045	558 aa	Known RBP	4.35	□□□□□ -1.71
SLX8	YER116C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms