RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C GTR1Q00582 310 aa1.51□□□□□ -2.17
SEC3YER008C MEH1Q02205 184 aa1.51□□□□□ -2.17
SEC3YER008C PSK2Q08217 1101 aa1.51□□□□□ -2.17
SEC3YER008C MDM12Q92328 271 aa1.51□□□□□ -2.17
SEC3YER008C PFK1P16861 987 aaKnown RBP1.51□□□□□ -2.17
SEC3YER008C STE13P33894 931 aa1.51□□□□□ -2.17
SEC3YER008C ECM21P38167 1117 aaKnown RBP1.51□□□□□ -2.17
SEC3YER008C PCL10P53124 433 aa1.51□□□□□ -2.17
SEC3YER008C CPR6P53691 371 aaKnown RBP1.51□□□□□ -2.17
SEC3YER008C HFD1Q04458 532 aa1.51□□□□□ -2.17
SEC3YER008C TRE2Q08693 809 aa1.51□□□□□ -2.17
SEC3YER008C TY3B-IQ7LHG5 1498 aaKnown RBP1.51□□□□□ -2.17
SEC3YER008C AAC3P18238 307 aa1.5□□□□□ -2.17
SEC3YER008C MRS6P32864 603 aaKnown RBP1.5□□□□□ -2.17
SEC3YER008C TSL1P38427 1098 aaKnown RBP1.5□□□□□ -2.17
SEC3YER008C RRP8P38961 392 aaKnown RBP1.5□□□□□ -2.17
SEC3YER008C MPT5P39016 859 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
SEC3YER008C MEF2P39677 819 aa1.5□□□□□ -2.17
SEC3YER008C MGS1P40151 587 aa1.5□□□□□ -2.17
SEC3YER008C QRI7P43122 407 aa1.5□□□□□ -2.17
SEC3YER008C RRT6P53117 311 aaPredicted RBP1.5□□□□□ -2.17
SEC3YER008C YGL081WP53156 320 aa1.5□□□□□ -2.17
SEC3YER008C MDR1P53258 950 aa1.5□□□□□ -2.17
SEC3YER008C NHX1Q04121 633 aa1.5□□□□□ -2.17
SEC3YER008C LPX1Q12405 387 aaKnown RBP1.5□□□□□ -2.17
SEC3YER008C PLB1P39105 664 aa1.5□□□□□ -2.17
SEC3YER008C YEL068CP39977 110 aa1.5□□□□□ -2.17
SEC3YER008C MND2P40577 368 aa1.5□□□□□ -2.17
SEC3YER008C YJL055WP47044 245 aa1.5□□□□□ -2.17
SEC3YER008C RIM8P53179 542 aa1.5□□□□□ -2.17
SEC3YER008C ECM9Q02202 377 aa1.5□□□□□ -2.17
SEC3YER008C GCN5Q03330 439 aa1.5□□□□□ -2.17
SEC3YER008C EIS1Q05050 843 aaKnown RBP1.5□□□□□ -2.17
SEC3YER008C YLR224WQ05947 369 aa1.5□□□□□ -2.17
SEC3YER008C OMS1Q06668 471 aa1.5□□□□□ -2.17
SEC3YER008C ISA1Q07821 250 aaPredicted RBP1.5□□□□□ -2.17
SEC3YER008C GUP2Q08929 609 aa1.5□□□□□ -2.17
SEC3YER008C ENV7Q12003 364 aa1.5□□□□□ -2.17
SEC3YER008C SPC29P33419 253 aa1.5□□□□□ -2.17
SEC3YER008C YKL151CP36059 337 aa1.5□□□□□ -2.17
SEC3YER008C HSL7P38274 827 aa1.5□□□□□ -2.17
SEC3YER008C UBS1P38290 277 aa1.5□□□□□ -2.17
SEC3YER008C PCM1P38628 557 aaKnown RBP1.5□□□□□ -2.17
SEC3YER008C NIT2P47016 307 aa1.5□□□□□ -2.17
SEC3YER008C YGR283CP53336 341 aaPredicted RBP1.5□□□□□ -2.17
SEC3YER008C SNP1Q00916 300 aaPredicted RBP1.5□□□□□ -2.17
SEC3YER008C YMR210WQ03649 449 aa1.5□□□□□ -2.17
SEC3YER008C CEF1Q03654 590 aaPredicted RBP1.5□□□□□ -2.17
SEC3YER008C ATG33Q06485 197 aa1.5□□□□□ -2.17
SEC3YER008C MCH5Q08777 521 aa1.5□□□□□ -2.17
SEC3YER008C YOL114CQ12322 202 aa1.5□□□□□ -2.17
SEC3YER008C GUK1P15454 187 aaKnown RBP1.5□□□□□ -2.17
SEC3YER008C PTP2P29461 750 aa1.5□□□□□ -2.17
SEC3YER008C APL2P36000 726 aaPredicted RBP1.5□□□□□ -2.17
SEC3YER008C MCD4P36051 919 aa1.5□□□□□ -2.17
SEC3YER008C BNA2P47125 453 aa1.5□□□□□ -2.17
SEC3YER008C PHM6Q05637 104 aa1.5□□□□□ -2.17
SEC3YER008C HAL9Q12180 1030 aa1.5□□□□□ -2.17
SEC3YER008C ATP4P05626 244 aa1.49□□□□□ -2.17
SEC3YER008C GLN4P13188 809 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C MET8P15807 274 aa1.49□□□□□ -2.17
SEC3YER008C MVD1P32377 396 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C HXT6P39003 570 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C HXT7P39004 570 aa1.49□□□□□ -2.17
SEC3YER008C DPH1P40487 425 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C VHR1P40522 640 aa1.49□□□□□ -2.17
SEC3YER008C SQS1P53866 767 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C PTA1Q01329 785 aaPredicted RBP1.49□□□□□ -2.17
SEC3YER008C BUL2Q03758 920 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C SPO16P17122 198 aa1.49□□□□□ -2.17
SEC3YER008C COX11P19516 300 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C SSH4P32343 579 aa1.49□□□□□ -2.17
SEC3YER008C HEM12P32347 362 aaPredicted RBP1.49□□□□□ -2.17
SEC3YER008C SWI3P32591 825 aa1.49□□□□□ -2.17
SEC3YER008C TOA1P32773 286 aa1.49□□□□□ -2.17
SEC3YER008C PGM1P33401 570 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C SET3P36124 751 aa1.49□□□□□ -2.17
SEC3YER008C YKR078WP36158 585 aaKnown RBP1.49□□□□□ -2.17
SEC3YER008C APN2P38207 520 aa1.49□□□□□ -2.17
SEC3YER008C ESL1P40456 1118 aa1.49□□□□□ -2.17
SEC3YER008C IRC24P40580 263 aa1.49□□□□□ -2.17
SEC3YER008C PRP31P49704 494 aaPredicted RBP1.49□□□□□ -2.17
SEC3YER008C YAP1802P53309 568 aa1.49□□□□□ -2.17
SEC3YER008C SIZ1Q04195 904 aa1.49□□□□□ -2.17
SEC3YER008C GAD1Q04792 585 aa1.49□□□□□ -2.17
SEC3YER008C YDR286CQ05530 114 aa1.49□□□□□ -2.17
SEC3YER008C STP4Q07351 490 aa1.49□□□□□ -2.17
SEC3YER008C DIA2Q08496 732 aaPredicted RBP1.49□□□□□ -2.17
SEC3YER008C NPC2Q12408 173 aa1.49□□□□□ -2.17
SEC3YER008C PCD1Q12524 340 aa1.49□□□□□ -2.17
SEC3YER008C YKU70P32807 602 aa1.49□□□□□ -2.17
SEC3YER008C DHR2P36009 735 aaPredicted RBP1.49□□□□□ -2.17
SEC3YER008C SUL1P38359 859 aa1.49□□□□□ -2.17
SEC3YER008C GRC3Q07845 632 aa1.49□□□□□ -2.17
SEC3YER008C YLL058WQ12198 575 aa1.49□□□□□ -2.17
SEC3YER008C VPS5Q92331 675 aa1.49□□□□□ -2.17
SEC3YER008C GFA1P14742 717 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C SWI4P25302 1093 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C HRR25P29295 494 aaKnown RBP1.48□□□□□ -2.17
SEC3YER008C CHS3P29465 1165 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms