RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C ASE1P50275 885 aa2.38□□□□□ -2.03
SSD1YDR293C RRT6P53117 311 aaPredicted RBP2.38□□□□□ -2.03
SSD1YDR293C HOP2P53187 214 aa2.38□□□□□ -2.03
SSD1YDR293C ADI1Q03677 179 aa2.38□□□□□ -2.03
SSD1YDR293C ISA1Q07821 250 aaPredicted RBP2.38□□□□□ -2.03
SSD1YDR293C SGT2Q12118 346 aaKnown RBP2.38□□□□□ -2.03
SSD1YDR293C TY3A-GQ12173 290 aa2.38□□□□□ -2.03
SSD1YDR293C TY3A-IQ99219 290 aa2.38□□□□□ -2.03
SSD1YDR293C COX11P19516 300 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C NAM7P30771 971 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C KAP122P32767 1081 aa2.37□□□□□ -2.03
SSD1YDR293C YKL107WP34251 309 aa2.37□□□□□ -2.03
SSD1YDR293C PEX5P35056 612 aa2.37□□□□□ -2.03
SSD1YDR293C YMR147WP40218 223 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C SEC28P40509 296 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C ARC1P46672 376 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C SUM1P46676 1062 aa2.37□□□□□ -2.03
SSD1YDR293C AIP1P46680 615 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C KAP114P53067 1004 aa2.37□□□□□ -2.03
SSD1YDR293C RPT4P53549 437 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C NOP13P53883 403 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SSD1YDR293C GPN2Q08726 347 aaPredicted RBP2.37□□□□□ -2.03
SSD1YDR293C OSW2Q12202 724 aa2.37□□□□□ -2.03
SSD1YDR293C ATG34Q12292 412 aa2.37□□□□□ -2.03
SSD1YDR293C ZRT2Q12436 422 aa2.37□□□□□ -2.03
SSD1YDR293C YOR111WQ99210 232 aa2.37□□□□□ -2.03
SSD1YDR293C HKR1P41809 1802 aa2.37□□□□□ -2.03
SSD1YDR293C YPK1P12688 680 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C SRP54P20424 541 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C VMA4P22203 233 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C PYC2P32327 1180 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C COT1P32798 439 aa2.37□□□□□ -2.03
SSD1YDR293C STO1P34160 861 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C KAP123P40069 1113 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C YER156CP40093 338 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C NEO1P40527 1151 aa2.37□□□□□ -2.03
SSD1YDR293C TRS85P46944 698 aa2.37□□□□□ -2.03
SSD1YDR293C LIF1P53150 421 aa2.37□□□□□ -2.03
SSD1YDR293C NCS2P53923 493 aaPredicted RBP2.37□□□□□ -2.03
SSD1YDR293C BOP3P53958 396 aa2.37□□□□□ -2.03
SSD1YDR293C ASI1P54074 624 aa2.37□□□□□ -2.03
SSD1YDR293C ECM7Q06200 448 aa2.37□□□□□ -2.03
SSD1YDR293C YLH47Q06493 454 aa2.37□□□□□ -2.03
SSD1YDR293C HOS1Q12214 470 aa2.37□□□□□ -2.03
SSD1YDR293C GIS3Q12418 502 aa2.37□□□□□ -2.03
SSD1YDR293C VPS5Q92331 675 aa2.37□□□□□ -2.03
SSD1YDR293C MBR1P23493 339 aa2.37□□□□□ -2.03
SSD1YDR293C KIP1P28742 1111 aa2.37□□□□□ -2.03
SSD1YDR293C RIM1P32445 135 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C LYP1P32487 611 aa2.37□□□□□ -2.03
SSD1YDR293C YSC83P32792 385 aa2.37□□□□□ -2.03
SSD1YDR293C AFG2P32794 780 aa2.37□□□□□ -2.03
SSD1YDR293C SKG6P32900 734 aaPredicted RBP2.37□□□□□ -2.03
SSD1YDR293C DOM34P33309 386 aa2.37□□□□□ -2.03
SSD1YDR293C LIN1P38852 340 aaPredicted RBP2.37□□□□□ -2.03
SSD1YDR293C TIF4631P39935 952 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C EMW1P42842 904 aaKnown RBP2.37□□□□□ -2.03
SSD1YDR293C TY4A-JP47023 414 aa2.37□□□□□ -2.03
SSD1YDR293C SLT2Q00772 484 aa2.37□□□□□ -2.03
SSD1YDR293C NGL3Q03210 505 aa2.37□□□□□ -2.03
SSD1YDR293C FCP1Q03254 732 aa2.37□□□□□ -2.03
SSD1YDR293C IOC2Q12072 812 aa2.37□□□□□ -2.03
SSD1YDR293C RRP36Q12481 300 aaPredicted RBP2.37□□□□□ -2.03
SSD1YDR293C PTC5Q12511 572 aa2.37□□□□□ -2.03
SSD1YDR293C RPS9AO13516 197 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C CDC6P09119 513 aa2.36□□□□□ -2.03
SSD1YDR293C MFT1P33441 392 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C YET1P35723 206 aa2.36□□□□□ -2.03
SSD1YDR293C FZO1P38297 855 aa2.36□□□□□ -2.03
SSD1YDR293C SIP3P38717 1229 aa2.36□□□□□ -2.03
SSD1YDR293C FIS1P40515 155 aa2.36□□□□□ -2.03
SSD1YDR293C TAD1P53065 400 aa2.36□□□□□ -2.03
SSD1YDR293C TAN1P53072 289 aaPredicted RBP2.36□□□□□ -2.03
SSD1YDR293C YGL081WP53156 320 aa2.36□□□□□ -2.03
SSD1YDR293C PIB2P53191 635 aa2.36□□□□□ -2.03
SSD1YDR293C YPL109CQ02981 657 aa2.36□□□□□ -2.03
SSD1YDR293C ATG38Q05789 226 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C ECM38Q05902 660 aaPredicted RBP2.36□□□□□ -2.03
SSD1YDR293C ABP140Q08641 628 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C CFT2Q12102 859 aaPredicted RBP2.36□□□□□ -2.03
SSD1YDR293C RKM4Q12504 494 aa2.36□□□□□ -2.03
SSD1YDR293C RMP1Q12530 201 aa2.36□□□□□ -2.03
SSD1YDR293C PMA1P05030 918 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C TUB3P09734 445 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C YER152CP10356 443 aa2.36□□□□□ -2.03
SSD1YDR293C PEP5P12868 1029 aa2.36□□□□□ -2.03
SSD1YDR293C MSD1P15179 658 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C TOA1P32773 286 aa2.36□□□□□ -2.03
SSD1YDR293C ATG19P35193 415 aa2.36□□□□□ -2.03
SSD1YDR293C OCT1P35999 772 aa2.36□□□□□ -2.03
SSD1YDR293C GAA1P39012 614 aa2.36□□□□□ -2.03
SSD1YDR293C DSN1P40568 576 aa2.36□□□□□ -2.03
SSD1YDR293C SAP185P40856 1058 aa2.36□□□□□ -2.03
SSD1YDR293C EPL1P43572 832 aa2.36□□□□□ -2.03
SSD1YDR293C NET1P47035 1189 aa2.36□□□□□ -2.03
SSD1YDR293C KTR5P53966 522 aaPredicted RBP2.36□□□□□ -2.03
SSD1YDR293C VMS1Q04311 632 aaKnown RBP2.36□□□□□ -2.03
SSD1YDR293C HDA2Q06629 674 aa2.36□□□□□ -2.03
SSD1YDR293C PEX15Q08215 383 aa2.36□□□□□ -2.03
SSD1YDR293C PCD1Q12524 340 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms