RNA–Protein interactions for RNA: YDR198C

RKM2, Transcript of Ribosomal protein lysine methyltransferase, yeast

Gene RKM2, Length 1,440 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM2	YDR198C	TAF11	Q04226	346 aa		5.09	□□□□□ -1.59
RKM2	YDR198C	EIS1	Q05050	843 aa	Known RBP	5.09	□□□□□ -1.59
RKM2	YDR198C	SPP382	Q06411	708 aa	Predicted RBP	5.09	□□□□□ -1.59
RKM2	YDR198C	CLP1	Q08685	445 aa	Predicted RBP	5.09	□□□□□ -1.59
RKM2	YDR198C	APL4	Q12028	832 aa		5.09	□□□□□ -1.59
RKM2	YDR198C	SFI1	Q12369	946 aa		5.09	□□□□□ -1.59
RKM2	YDR198C	YMR084W	A2P2R3	262 aa		5.08	□□□□□ -1.6
RKM2	YDR198C	SRO9	P25567	434 aa	Known RBP	5.08	□□□□□ -1.6
RKM2	YDR198C	NPL6	P32832	435 aa		5.08	□□□□□ -1.6
RKM2	YDR198C	RIB7	P33312	244 aa		5.08	□□□□□ -1.6
RKM2	YDR198C	YEL1	P34225	687 aa		5.08	□□□□□ -1.6
RKM2	YDR198C	YKL077W	P36081	392 aa		5.08	□□□□□ -1.6
RKM2	YDR198C	FTH1	P38310	465 aa		5.08	□□□□□ -1.6
RKM2	YDR198C	IRC6	P43615	237 aa		5.08	□□□□□ -1.6
RKM2	YDR198C	RUD3	Q12234	484 aa	Known RBP	5.08	□□□□□ -1.6
RKM2	YDR198C	MSS18	P08593	268 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	PDX1	P16451	410 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	RPC53	P25441	422 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	PAH1	P32567	862 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	BYE1	P36106	594 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	PIM1	P36775	1133 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	EXO5	P38289	585 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	YHL012W	P38709	493 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	YHR131C	P38835	850 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	SIT1	P39980	628 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	ERR3	P42222	437 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	QRI7	P43122	407 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	PIL1	P53252	339 aa	Known RBP	5.07	□□□□□ -1.6
RKM2	YDR198C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
RKM2	YDR198C	MLH2	Q07980	695 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	REX3	Q12090	404 aa		5.07	□□□□□ -1.6
RKM2	YDR198C	HOM2	P13663	365 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	PMS1	P14242	873 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	AAC3	P18238	307 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	RPB4	P20433	221 aa	Predicted RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	MSH3	P25336	1018 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	SMY1	P32364	656 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	MKK2	P32491	506 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	ARC19	P33204	171 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	MDL1	P33310	695 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	BIT2	P38346	545 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	NEM1	P38757	446 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	PPE1	P38796	400 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	CKB2	P38930	258 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	CCC2	P38995	1004 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	YAR028W	P39548	234 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	OAF1	P39720	1047 aa	Predicted RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	GZF3	P42944	551 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	LAM5	P43560	674 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	YJR096W	P47137	282 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	AIM14	P53109	570 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	SLD3	P53135	668 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	MNP1	P53163	194 aa	Predicted RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	SPO1	P53541	631 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	ULP1	Q02724	621 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	FCP1	Q03254	732 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	ATG38	Q05789	226 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	DBP9	Q06218	594 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	ARV1	Q06541	321 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	RIX7	Q07844	837 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	YPL277C	Q08989	487 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	ISA2	Q12425	185 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	TRP2	P00899	507 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	RAD53	P22216	821 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	MSH1	P25846	959 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	SWC3	P31376	625 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	NTG1	P31378	399 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	SSE1	P32589	693 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	MUD2	P36084	527 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	RVS167	P39743	482 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	SAH1	P39954	449 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	PIC2	P40035	300 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	KHA1	P40309	873 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	TOK1	P40310	691 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	VHR1	P40522	640 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	CIR1	P42940	261 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	MET13	P53128	600 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	ALF1	P53904	254 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	PRP42	Q03776	544 aa	Known RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	ARA2	Q04212	335 aa		5.06	□□□□□ -1.6
RKM2	YDR198C	RRP36	Q12481	300 aa	Predicted RBP	5.06	□□□□□ -1.6
RKM2	YDR198C	SOD2	P00447	233 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	RPS13	P05756	151 aa	Known RBP	5.05	□□□□□ -1.6
RKM2	YDR198C	PET123	P17558	318 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	DAL7	P21826	554 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	RPT3	P33298	428 aa	Known RBP	5.05	□□□□□ -1.6
RKM2	YDR198C	DOM34	P33309	386 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	SLC1	P33333	303 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	XKS1	P42826	600 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	CCT7	P42943	550 aa	Known RBP	5.05	□□□□□ -1.6
RKM2	YDR198C	UPF3	P48412	387 aa	Known RBP	5.05	□□□□□ -1.6
RKM2	YDR198C	FOL2	P51601	243 aa	Known RBP	5.05	□□□□□ -1.6
RKM2	YDR198C	PCL10	P53124	433 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	CNM67	P53865	581 aa	Known RBP	5.05	□□□□□ -1.6
RKM2	YDR198C	CIK1	Q01649	594 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	ADA2	Q02336	434 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	GUD1	Q07729	489 aa		5.05	□□□□□ -1.6
RKM2	YDR198C	CUE5	Q08412	411 aa	Known RBP	5.05	□□□□□ -1.6
RKM2	YDR198C	SRD1	P09007	221 aa		5.04	□□□□□ -1.6
RKM2	YDR198C	RAD18	P10862	487 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms