RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W CSE2P33308 149 aa9.99□□□□□ -0.81
SED1YDR077W AGP2P38090 596 aa9.99□□□□□ -0.81
SED1YDR077W MSG5P38590 489 aa9.99□□□□□ -0.81
SED1YDR077W RPT2P40327 437 aaKnown RBP9.99□□□□□ -0.81
SED1YDR077W NMD5P46970 1048 aa9.99□□□□□ -0.81
SED1YDR077W YJR039WP47107 1121 aa9.99□□□□□ -0.81
SED1YDR077W YML6P51998 286 aa9.99□□□□□ -0.81
SED1YDR077W TUB3P09734 445 aaKnown RBP9.98□□□□□ -0.81
SED1YDR077W TIF1P10081 395 aaKnown RBP9.98□□□□□ -0.81
SED1YDR077W SPO16P17122 198 aa9.98□□□□□ -0.81
SED1YDR077W GCD6P32501 712 aaKnown RBP9.98□□□□□ -0.81
SED1YDR077W SHE3P38272 425 aaKnown RBP9.98□□□□□ -0.81
SED1YDR077W STB4P50104 949 aa9.98□□□□□ -0.81
SED1YDR077W YNL247WP53852 767 aaKnown RBP9.98□□□□□ -0.81
SED1YDR077W RCR2Q03446 210 aaKnown RBP9.98□□□□□ -0.81
SED1YDR077W MDM38Q08179 573 aa9.98□□□□□ -0.81
SED1YDR077W AIM39Q08223 395 aa9.98□□□□□ -0.81
SED1YDR077W TRE1Q08919 783 aa9.98□□□□□ -0.81
SED1YDR077W YDR524C-BQ3E6R4 66 aa9.98□□□□□ -0.81
SED1YDR077W PUT4P15380 627 aa9.97□□□□□ -0.81
SED1YDR077W ECM32P32644 1121 aaKnown RBP9.97□□□□□ -0.81
SED1YDR077W RPC37P36121 282 aa9.97□□□□□ -0.81
SED1YDR077W YBL036CP38197 257 aa9.97□□□□□ -0.81
SED1YDR077W SAP1P39955 897 aaKnown RBP9.97□□□□□ -0.81
SED1YDR077W DSE1P40077 573 aa9.97□□□□□ -0.81
SED1YDR077W YMR134WP40207 237 aa9.97□□□□□ -0.81
SED1YDR077W KHA1P40309 873 aa9.97□□□□□ -0.81
SED1YDR077W STP1Q00947 519 aa9.97□□□□□ -0.81
SED1YDR077W MUB1Q03162 620 aa9.97□□□□□ -0.81
SED1YDR077W STE23Q06010 1027 aa9.97□□□□□ -0.81
SED1YDR077W OMS1Q06668 471 aa9.97□□□□□ -0.81
SED1YDR077W EMP46Q12396 444 aa9.97□□□□□ -0.81
SED1YDR077W LDB19Q12502 818 aa9.97□□□□□ -0.81
SED1YDR077W GAL80P04387 435 aa9.96□□□□□ -0.82
SED1YDR077W TRX1P22217 103 aaKnown RBP9.96□□□□□ -0.82
SED1YDR077W LRE1P25579 583 aaKnown RBP9.96□□□□□ -0.82
SED1YDR077W GAC1P28006 793 aa9.96□□□□□ -0.82
SED1YDR077W PLC1P32383 869 aa9.96□□□□□ -0.82
SED1YDR077W FRE1P32791 686 aa9.96□□□□□ -0.82
SED1YDR077W CCL1P37366 393 aa9.96□□□□□ -0.82
SED1YDR077W SWC5P38326 303 aa9.96□□□□□ -0.82
SED1YDR077W VHC1P38329 1120 aa9.96□□□□□ -0.82
SED1YDR077W INA22P40576 216 aa9.96□□□□□ -0.82
SED1YDR077W YNL108CP53929 270 aa9.96□□□□□ -0.82
SED1YDR077W CIR2Q08822 631 aa9.96□□□□□ -0.82
SED1YDR077W REC8Q12188 680 aa9.96□□□□□ -0.82
SED1YDR077W PUF4P25339 888 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
SED1YDR077W SRB2P34162 210 aa9.95□□□□□ -0.82
SED1YDR077W PBP2P38151 413 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
SED1YDR077W POP4P38336 279 aa9.95□□□□□ -0.82
SED1YDR077W BRL1P38770 471 aa9.95□□□□□ -0.82
SED1YDR077W ARG2P40360 574 aa9.95□□□□□ -0.82
SED1YDR077W RGD2P43556 714 aa9.95□□□□□ -0.82
SED1YDR077W SPC98P53540 846 aa9.95□□□□□ -0.82
SED1YDR077W KAP95Q06142 861 aaKnown RBP9.95□□□□□ -0.82
SED1YDR077W ESC8Q08119 714 aa9.95□□□□□ -0.82
SED1YDR077W VPS54Q12071 889 aa9.95□□□□□ -0.82
SED1YDR077W YRR1Q12172 810 aa9.95□□□□□ -0.82
SED1YDR077W VPS5Q92331 675 aa9.95□□□□□ -0.82
SED1YDR077W AEP2P22136 580 aa9.94□□□□□ -0.82
SED1YDR077W BIO2P32451 375 aa9.94□□□□□ -0.82
SED1YDR077W RRD1P40454 393 aaKnown RBP9.94□□□□□ -0.82
SED1YDR077W TMA108P40462 946 aa9.94□□□□□ -0.82
SED1YDR077W YIL054WP40524 105 aa9.94□□□□□ -0.82
SED1YDR077W SAP185P40856 1058 aa9.94□□□□□ -0.82
SED1YDR077W SPO74P45819 413 aa9.94□□□□□ -0.82
SED1YDR077W ATG36P46983 293 aa9.94□□□□□ -0.82
SED1YDR077W ASG7P46993 209 aa9.94□□□□□ -0.82
SED1YDR077W HLJ1P48353 224 aa9.94□□□□□ -0.82
SED1YDR077W YNL115CP53925 644 aa9.94□□□□□ -0.82
SED1YDR077W YNL040WP53960 456 aaPredicted RBP9.94□□□□□ -0.82
SED1YDR077W FMP30Q02883 468 aa9.94□□□□□ -0.82
SED1YDR077W MAG2Q06436 670 aaKnown RBP9.94□□□□□ -0.82
SED1YDR077W FMP25Q08023 583 aa9.94□□□□□ -0.82
SED1YDR077W DIS3Q08162 1001 aaKnown RBP9.94□□□□□ -0.82
SED1YDR077W ACM1Q08981 209 aa9.94□□□□□ -0.82
SED1YDR077W FAP7Q12055 197 aaPredicted RBP9.94□□□□□ -0.82
SED1YDR077W YDR018CQ12185 396 aa9.94□□□□□ -0.82
SED1YDR077W SEY1Q99287 776 aa9.94□□□□□ -0.82
SED1YDR077W TPK1P06244 397 aa9.93□□□□□ -0.82
SED1YDR077W CIT2P08679 460 aa9.93□□□□□ -0.82
SED1YDR077W ADH4P10127 382 aa9.93□□□□□ -0.82
SED1YDR077W YME1P32795 747 aa9.93□□□□□ -0.82
SED1YDR077W ABZ1P37254 787 aaPredicted RBP9.93□□□□□ -0.82
SED1YDR077W LYS9P38999 446 aa9.93□□□□□ -0.82
SED1YDR077W SIP5P40210 489 aaKnown RBP9.93□□□□□ -0.82
SED1YDR077W YGR035CP53222 116 aa9.93□□□□□ -0.82
SED1YDR077W CPR6P53691 371 aaKnown RBP9.93□□□□□ -0.82
SED1YDR077W UTP13Q05946 817 aaKnown RBP9.93□□□□□ -0.82
SED1YDR077W THI7Q05998 598 aa9.93□□□□□ -0.82
SED1YDR077W ECM30Q06673 1274 aa9.93□□□□□ -0.82
SED1YDR077W TAF10Q12030 206 aa9.93□□□□□ -0.82
SED1YDR077W RAD10P06838 210 aa9.92□□□□□ -0.82
SED1YDR077W YML002WP0CF17 737 aa9.92□□□□□ -0.82
SED1YDR077W YPK1P12688 680 aaKnown RBP9.92□□□□□ -0.82
SED1YDR077W PEP5P12868 1029 aa9.92□□□□□ -0.82
SED1YDR077W SLY1P22213 666 aa9.92□□□□□ -0.82
SED1YDR077W CCT2P39076 527 aaKnown RBP9.92□□□□□ -0.82
SED1YDR077W SAW1P39735 261 aa9.92□□□□□ -0.82
SED1YDR077W POL31P46957 487 aa9.92□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms