RNA–Protein interactions for RNA: YDL170W

UGA3, Transcript of Transcriptional activator for GABA-dependent induction of GABA genes, yeast

Gene UGA3, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA3	YDL170W	PCL10	P53124	433 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	ARA2	Q04212	335 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	RSC3	Q06639	885 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
UGA3	YDL170W	GUP2	Q08929	609 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	RIB2	Q12362	591 aa	Known RBP	4.61	□□□□□ -1.67
UGA3	YDL170W	YPK9	Q12697	1472 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	STF1	P01098	86 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	ADE8	P04161	214 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	HMG1	P12683	1054 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	DPH2	P32461	534 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	XRS2	P33301	854 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	YEL068C	P39977	110 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	YAP1802	P53309	568 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	LCD1	Q04377	747 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	DUS3	Q06053	668 aa	Known RBP	4.61	□□□□□ -1.67
UGA3	YDL170W	YCG1	Q06680	1035 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	RXT3	Q07458	294 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	KCS1	Q12494	1050 aa		4.61	□□□□□ -1.67
UGA3	YDL170W	TUB2	P02557	457 aa	Known RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	BI4	P03879	638 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	MET8	P15807	274 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	HCA4	P20448	770 aa	Known RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	CDC48	P25694	835 aa	Known RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	NPL6	P32832	435 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	MCD4	P36051	919 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	YBR238C	P38330	731 aa	Known RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	SIP5	P40210	489 aa	Known RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	AXL1	P40851	1208 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	ASK10	P48361	1146 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	CEG1	Q01159	459 aa	Predicted RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	HEL2	Q05580	639 aa	Known RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	ADY3	Q07732	790 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	MDM38	Q08179	573 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	GPB1	Q08886	897 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	CEX1	Q12453	761 aa		4.6	□□□□□ -1.67
UGA3	YDL170W	NOP58	Q12499	511 aa	Known RBP	4.6	□□□□□ -1.67
UGA3	YDL170W	RPC53	P25441	422 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	ORC2	P32833	620 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	RPT3	P33298	428 aa	Known RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	BYE1	P36106	594 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	YRO2	P38079	344 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	TPA1	P40032	644 aa	Known RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	MAM1	P40065	302 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	RIC1	P40395	1056 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	GYP8	P43570	497 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	SAE2	P46946	345 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	SET2	P46995	733 aa	Known RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	OCA1	P50946	238 aa	Predicted RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	MOT3	P54785	490 aa	Known RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	PTA1	Q01329	785 aa	Predicted RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	YDR338C	Q05497	695 aa		4.59	□□□□□ -1.67
UGA3	YDL170W	ACK1	Q07622	623 aa	Predicted RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	SGT2	Q12118	346 aa	Known RBP	4.59	□□□□□ -1.67
UGA3	YDL170W	HOP1	P20050	605 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	SUI2	P20459	304 aa	Known RBP	4.58	□□□□□ -1.68
UGA3	YDL170W	CDC20	P26309	610 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	NGG1	P32494	702 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	HSL7	P38274	827 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	RRF1	P38771	230 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	BNA2	P47125	453 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	GTF1	P53260	183 aa	Predicted RBP	4.58	□□□□□ -1.68
UGA3	YDL170W	DAM1	P53267	343 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	YGR283C	P53336	341 aa	Predicted RBP	4.58	□□□□□ -1.68
UGA3	YDL170W	TIM10	P87108	93 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	YHM2	Q04013	314 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	HLR1	Q04429	423 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	GNT1	Q12096	491 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	DBP10	Q12389	995 aa	Known RBP	4.58	□□□□□ -1.68
UGA3	YDL170W	VPS15	P22219	1454 aa		4.58	□□□□□ -1.68
UGA3	YDL170W	SEM1	O94742	89 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	RPS21A	P0C0V8	87 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	RPL11A	P0C0W9	174 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	RED1	P14291	827 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	PDX1	P16451	410 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	GLK1	P17709	500 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	SER1	P33330	395 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	MTH1	P35198	433 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	UGA2	P38067	497 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	SAW1	P39735	261 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	RNR4	P49723	345 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	MRPL13	Q02204	264 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	ATP25	Q03153	612 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	NHX1	Q04121	633 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	SIZ1	Q04195	904 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	TMA10	Q06177	86 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	SPP382	Q06411	708 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	MET7	Q08645	548 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	SMF3	Q12078	473 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	ARP7	Q12406	477 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	RPL11B	Q3E757	174 aa	Predicted RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	VMA2	P16140	517 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	TRX1	P22217	103 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	REC104	P33323	182 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	DEF1	P35732	738 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	NPR3	P38742	1146 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	RPN10	P38886	268 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	TOK1	P40310	691 aa		4.57	□□□□□ -1.68
UGA3	YDL170W	DPH1	P40487	425 aa	Known RBP	4.57	□□□□□ -1.68
UGA3	YDL170W	CIR1	P42940	261 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms