RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	SSH4	P32343	579 aa		6.4	□□□□□ -1.39
RPN5	YDL147W	YHR033W	P38690	423 aa		6.4	□□□□□ -1.39
RPN5	YDL147W	YHR112C	P38716	378 aa		6.4	□□□□□ -1.39
RPN5	YDL147W	STP4	Q07351	490 aa		6.4	□□□□□ -1.39
RPN5	YDL147W	DIA2	Q08496	732 aa	Predicted RBP	6.4	□□□□□ -1.39
RPN5	YDL147W	MSM1	P22438	575 aa		6.39	□□□□□ -1.39
RPN5	YDL147W	CTF13	P35203	478 aa		6.39	□□□□□ -1.39
RPN5	YDL147W	PPE1	P38796	400 aa		6.39	□□□□□ -1.39
RPN5	YDL147W	SCS2	P40075	244 aa	Known RBP	6.39	□□□□□ -1.39
RPN5	YDL147W	IML2	P47031	731 aa		6.39	□□□□□ -1.39
RPN5	YDL147W	TAF4	P50105	388 aa		6.39	□□□□□ -1.39
RPN5	YDL147W	YLR224W	Q05947	369 aa		6.39	□□□□□ -1.39
RPN5	YDL147W	VAS1	P07806	1104 aa	Known RBP	6.38	□□□□□ -1.39
RPN5	YDL147W	RNR1	P21524	888 aa	Known RBP	6.38	□□□□□ -1.39
RPN5	YDL147W	EXO84	P38261	753 aa		6.38	□□□□□ -1.39
RPN5	YDL147W	CCT3	P39077	534 aa	Known RBP	6.38	□□□□□ -1.39
RPN5	YDL147W	VID27	P40157	782 aa		6.38	□□□□□ -1.39
RPN5	YDL147W	CTK1	Q03957	528 aa	Known RBP	6.38	□□□□□ -1.39
RPN5	YDL147W	HLR1	Q04429	423 aa		6.38	□□□□□ -1.39
RPN5	YDL147W	BRE1	Q07457	700 aa	Known RBP	6.38	□□□□□ -1.39
RPN5	YDL147W	RPS13	P05756	151 aa	Known RBP	6.37	□□□□□ -1.39
RPN5	YDL147W	KAR4	P25583	335 aa		6.37	□□□□□ -1.39
RPN5	YDL147W	TAF1	P46677	1066 aa		6.37	□□□□□ -1.39
RPN5	YDL147W	PUS4	P48567	403 aa	Known RBP	6.37	□□□□□ -1.39
RPN5	YDL147W	SQS1	P53866	767 aa	Known RBP	6.37	□□□□□ -1.39
RPN5	YDL147W	YDR132C	Q03900	495 aa		6.37	□□□□□ -1.39
RPN5	YDL147W	BLS1	Q06071	122 aa		6.37	□□□□□ -1.39
RPN5	YDL147W	VPS5	Q92331	675 aa		6.37	□□□□□ -1.39
RPN5	YDL147W	KIN82	P25341	720 aa		6.36	□□□□□ -1.39
RPN5	YDL147W	APM3	P38153	483 aa		6.36	□□□□□ -1.39
RPN5	YDL147W	YNL195C	P40168	261 aa		6.36	□□□□□ -1.39
RPN5	YDL147W	FAF1	P40546	346 aa	Predicted RBP	6.36	□□□□□ -1.39
RPN5	YDL147W	BUD8	P41698	603 aa		6.36	□□□□□ -1.39
RPN5	YDL147W	SLU7	Q02775	382 aa	Known RBP	6.36	□□□□□ -1.39
RPN5	YDL147W	YML131W	Q03102	365 aa		6.36	□□□□□ -1.39
RPN5	YDL147W	VPS36	Q06696	566 aa		6.36	□□□□□ -1.39
RPN5	YDL147W	TGL5	Q12043	749 aa		6.36	□□□□□ -1.39
RPN5	YDL147W	SSM4	P40318	1319 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	RPS9B	P05755	195 aa	Known RBP	6.35	□□□□□ -1.39
RPN5	YDL147W	IME1	P21190	360 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	CBP3	P21560	335 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	BIT61	P47041	543 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	MDR1	P53258	950 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	TEX1	P53851	422 aa	Known RBP	6.35	□□□□□ -1.39
RPN5	YDL147W	RCR2	Q03446	210 aa	Known RBP	6.35	□□□□□ -1.39
RPN5	YDL147W	HMO1	Q03973	246 aa	Known RBP	6.35	□□□□□ -1.39
RPN5	YDL147W	MCH5	Q08777	521 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	HOS1	Q12214	470 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	ATG11	Q12527	1178 aa		6.35	□□□□□ -1.39
RPN5	YDL147W	ADH4	P10127	382 aa		6.34	□□□□□ -1.39
RPN5	YDL147W	FKH2	P41813	862 aa		6.34	□□□□□ -1.39
RPN5	YDL147W	NOP9	P47077	666 aa	Known RBP	6.34	□□□□□ -1.39
RPN5	YDL147W	AMA1	P50082	593 aa		6.34	□□□□□ -1.39
RPN5	YDL147W	INP52	P50942	1183 aa		6.34	□□□□□ -1.39
RPN5	YDL147W	POM34	Q12445	299 aa		6.34	□□□□□ -1.39
RPN5	YDL147W	SOD2	P00447	233 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	CWH43	P25618	953 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	SHM2	P37291	469 aa	Known RBP	6.33	□□□□□ -1.4
RPN5	YDL147W	ERP2	P39704	215 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	SWD1	P39706	426 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	RPT2	P40327	437 aa	Known RBP	6.33	□□□□□ -1.4
RPN5	YDL147W	MAD3	P47074	515 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	PEF1	P53238	335 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	MOT3	P54785	490 aa	Known RBP	6.33	□□□□□ -1.4
RPN5	YDL147W	SVL3	Q03088	825 aa	Known RBP	6.33	□□□□□ -1.4
RPN5	YDL147W	TRI1	Q05024	226 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	ENB1	Q08299	606 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	ECM3	Q99252	613 aa		6.33	□□□□□ -1.4
RPN5	YDL147W	GFD2	P25370	566 aa	Known RBP	6.32	□□□□□ -1.4
RPN5	YDL147W	MAC1	P35192	417 aa		6.32	□□□□□ -1.4
RPN5	YDL147W	MNT2	P53059	558 aa		6.32	□□□□□ -1.4
RPN5	YDL147W	SPO1	P53541	631 aa		6.32	□□□□□ -1.4
RPN5	YDL147W	RTK1	Q12100	620 aa	Predicted RBP	6.32	□□□□□ -1.4
RPN5	YDL147W	PEX1	P24004	1043 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	ERG6	P25087	383 aa	Known RBP	6.31	□□□□□ -1.4
RPN5	YDL147W	PRE4	P30657	266 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	YPT7	P32939	208 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	AIM3	P38266	947 aa	Known RBP	6.31	□□□□□ -1.4
RPN5	YDL147W	YIR042C	P40586	236 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	MAD2	P40958	196 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	ERR3	P42222	437 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	RIM8	P53179	542 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	MRPS35	P53292	345 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	AIM41	Q12032	185 aa		6.31	□□□□□ -1.4
RPN5	YDL147W	DBP10	Q12389	995 aa	Known RBP	6.31	□□□□□ -1.4
RPN5	YDL147W	HRP1	Q99383	534 aa	Known RBP	6.31	□□□□□ -1.4
RPN5	YDL147W	PHO5	P00635	467 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	MET3	P08536	511 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	MIS1	P09440	975 aa	Known RBP	6.3	□□□□□ -1.4
RPN5	YDL147W	BEM3	P32873	1128 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	RMA1	P36001	430 aa	Known RBP	6.3	□□□□□ -1.4
RPN5	YDL147W	PSY4	P38193	441 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	YLF2	P38746	405 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	PRM2	P40534	656 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	TAH11	P47112	604 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	YNR071C	P53757	342 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	DLT1	Q04216	342 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	YMR018W	Q04364	514 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	COG4	Q06096	861 aa		6.3	□□□□□ -1.4
RPN5	YDL147W	DIN7	Q12086	430 aa		6.3	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms