RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	ADD66	P36040	267 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
RPT2	YDL007W	YBR062C	P38239	180 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	FZO1	P38297	855 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	LIN1	P38852	340 aa	Predicted RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	BEM4	P39011	633 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	CCT2	P39076	527 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	YAR028W	P39548	234 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	AIM20	P40451	204 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	GVP36	P40531	326 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	AIP1	P46680	615 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	ERP6	P53198	216 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	YGR117C	P53270	476 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	SUB1	P54000	292 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	RPN4	Q03465	531 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	MED7	Q08278	222 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	YLR122C	Q12312	125 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	AHC1	Q12433	566 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	OCA6	Q12454	224 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	PPR1	P07272	904 aa	Predicted RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	YMR085W	P0CF18	432 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	GFA1	P14742	717 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	YCR051W	P25631	222 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	RAD27	P26793	382 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	LHS1	P36016	881 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	GRX7	P38068	203 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	NEM1	P38757	446 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	BCD1	P38772	366 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	YHR131C	P38835	850 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	SPF1	P39986	1215 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	KAP123	P40069	1113 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	VID27	P40157	782 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	INA22	P40576	216 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	IES1	P43579	692 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	SPO74	P45819	413 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	TIM54	P47045	478 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	YGR045C	P53229	120 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	ALG12	P53730	551 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	YNL144C	P53907	740 aa		5.74	□□□□□ -1.49
RPT2	YDL007W	RPT6	Q01939	405 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	YMR114C	Q04471	368 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	YLR225C	Q05948	407 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	GET3	Q12154	354 aa	Known RBP	5.74	□□□□□ -1.49
RPT2	YDL007W	SUP35	P05453	685 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	HEM13	P11353	328 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	TAL1	P15019	335 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	SWI4	P25302	1093 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	NAM7	P30771	971 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	HXT1	P32465	570 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	STE13	P33894	931 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	RPC25	P35718	212 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	YMR147W	P40218	223 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	PSF2	P40359	213 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	YNL320W	P42840	284 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	SLS1	P42900	643 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	UBP6	P43593	499 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	DAS1	P47005	663 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	TYW3	P53177	273 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	EEB1	Q02891	456 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	YML119W	Q03208	357 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	USA1	Q03714	838 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	GIR2	Q03768	265 aa	Predicted RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	VPS64	Q03944	604 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	MRD1	Q06106	887 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	CSR1	Q06705	408 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	RLP24	Q07915	199 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	SLK19	Q08581	821 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	HRK1	Q08732	759 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	APL5	Q08951	932 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	TMA46	Q12000	345 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	ALG6	Q12001	544 aa	Known RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	TAF10	Q12030	206 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	CWC2	Q12046	339 aa	Predicted RBP	5.73	□□□□□ -1.49
RPT2	YDL007W	PTC5	Q12511	572 aa		5.73	□□□□□ -1.49
RPT2	YDL007W	FIG2	P25653	1609 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	RPB2	P08518	1224 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	RPS4A	P0CX35	261 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	RPS4B	P0CX36	261 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	TYR1	P20049	452 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	MCM3	P24279	971 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	MVD1	P32377	396 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	NIP1	P32497	812 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	RDH54	P38086	958 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	TDA11	P38854	504 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	RTS1	P38903	757 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	SCS2	P40075	244 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	YRB1	P41920	201 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	GCN20	P43535	752 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	YJR039W	P47107	1121 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	ALT1	P52893	592 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	ELA1	P53861	379 aa	Predicted RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	TRM44	Q02648	567 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	NAN1	Q02931	896 aa	Known RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	KRE28	Q04431	385 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	MMR1	Q06324	491 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	SPP382	Q06411	708 aa	Predicted RBP	5.72	□□□□□ -1.49
RPT2	YDL007W	HDA2	Q06629	674 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	PSR2	Q07949	397 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	MET7	Q08645	548 aa		5.72	□□□□□ -1.49
RPT2	YDL007W	NFI1	Q12216	726 aa		5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms