RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C ALG11P53954 548 aaKnown RBP1.98□□□□□ -2.09
PEP1YBL017C CWC21Q03375 135 aaKnown RBP1.98□□□□□ -2.09
PEP1YBL017C AIM33Q04516 312 aa1.98□□□□□ -2.09
PEP1YBL017C OPY2Q06810 360 aa1.98□□□□□ -2.09
PEP1YBL017C MDM38Q08179 573 aa1.98□□□□□ -2.09
PEP1YBL017C TRA1P38811 3744 aa1.97□□□□□ -2.09
PEP1YBL017C SES1P07284 462 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C PEP5P12868 1029 aa1.97□□□□□ -2.09
PEP1YBL017C ATE1P16639 503 aa1.97□□□□□ -2.09
PEP1YBL017C DBP5P20449 482 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C MEF1P25039 761 aa1.97□□□□□ -2.09
PEP1YBL017C RPC37P36121 282 aa1.97□□□□□ -2.09
PEP1YBL017C DSF2P38213 736 aa1.97□□□□□ -2.09
PEP1YBL017C SIF2P38262 535 aa1.97□□□□□ -2.09
PEP1YBL017C YBR225WP38321 900 aa1.97□□□□□ -2.09
PEP1YBL017C SMC2P38989 1170 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C MEP1P40260 492 aa1.97□□□□□ -2.09
PEP1YBL017C TFG1P41895 735 aaPredicted RBP1.97□□□□□ -2.09
PEP1YBL017C SGM1P47166 707 aa1.97□□□□□ -2.09
PEP1YBL017C NUT1P53114 1132 aa1.97□□□□□ -2.09
PEP1YBL017C YGR273CP53329 174 aa1.97□□□□□ -2.09
PEP1YBL017C SPP2Q02521 185 aa1.97□□□□□ -2.09
PEP1YBL017C WAR1Q03631 944 aa1.97□□□□□ -2.09
PEP1YBL017C RTN1Q04947 295 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C HBT1Q07653 1046 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C SIL1Q08199 421 aa1.97□□□□□ -2.09
PEP1YBL017C PPH22P23595 377 aa1.97□□□□□ -2.09
PEP1YBL017C DRE2P36152 348 aa1.97□□□□□ -2.09
PEP1YBL017C CCL1P37366 393 aa1.97□□□□□ -2.09
PEP1YBL017C MIP6P38760 659 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C PIH1P38768 344 aa1.97□□□□□ -2.09
PEP1YBL017C PEX28P38848 579 aa1.97□□□□□ -2.09
PEP1YBL017C PAC1P39946 494 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C YTA12P40341 825 aa1.97□□□□□ -2.09
PEP1YBL017C TAD1P53065 400 aa1.97□□□□□ -2.09
PEP1YBL017C MAL13P53338 473 aa1.97□□□□□ -2.09
PEP1YBL017C EMI2Q04409 500 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C YLH47Q06493 454 aa1.97□□□□□ -2.09
PEP1YBL017C TSR1Q07381 788 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C AI3P03877 415 aa1.97□□□□□ -2.09
PEP1YBL017C HCM1P25364 564 aa1.97□□□□□ -2.09
PEP1YBL017C EFB1P32471 206 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C RPN12P32496 274 aa1.97□□□□□ -2.09
PEP1YBL017C PMT1P33775 817 aa1.97□□□□□ -2.09
PEP1YBL017C NOP4P37838 685 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C BTT1P40314 149 aaPredicted RBP1.97□□□□□ -2.09
PEP1YBL017C NNF2P53253 936 aa1.97□□□□□ -2.09
PEP1YBL017C YNL134CP53912 376 aaKnown RBP1.97□□□□□ -2.09
PEP1YBL017C GPI13Q07830 1017 aa1.97□□□□□ -2.09
PEP1YBL017C YAP7Q08182 245 aa1.97□□□□□ -2.09
PEP1YBL017C LEA1Q08963 238 aaPredicted RBP1.97□□□□□ -2.09
PEP1YBL017C GPM2Q12008 311 aa1.97□□□□□ -2.09
PEP1YBL017C STB3Q12427 513 aa1.97□□□□□ -2.09
PEP1YBL017C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
PEP1YBL017C RPC31P17890 251 aa1.96□□□□□ -2.09
PEP1YBL017C VPS24P36095 224 aaKnown RBP1.96□□□□□ -2.09
PEP1YBL017C HSE1P38753 452 aa1.96□□□□□ -2.09
PEP1YBL017C MNN1P39106 762 aa1.96□□□□□ -2.09
PEP1YBL017C YFL034WP43564 1073 aa1.96□□□□□ -2.09
PEP1YBL017C CPR7P47103 393 aa1.96□□□□□ -2.09
PEP1YBL017C TGL2P54857 326 aa1.96□□□□□ -2.09
PEP1YBL017C RCR2Q03446 210 aaKnown RBP1.96□□□□□ -2.09
PEP1YBL017C MSH6Q03834 1242 aa1.96□□□□□ -2.09
PEP1YBL017C NUT2Q06213 157 aa1.96□□□□□ -2.09
PEP1YBL017C JIP5Q06214 492 aaPredicted RBP1.96□□□□□ -2.09
PEP1YBL017C VPS54Q12071 889 aa1.96□□□□□ -2.09
PEP1YBL017C CMR1Q12510 522 aaKnown RBP1.96□□□□□ -2.09
PEP1YBL017C PET111P08468 800 aa1.96□□□□□ -2.1
PEP1YBL017C GPA1P08539 472 aa1.96□□□□□ -2.1
PEP1YBL017C RGP1P16664 663 aa1.96□□□□□ -2.1
PEP1YBL017C AEP2P22136 580 aa1.96□□□□□ -2.1
PEP1YBL017C SMI1P32566 505 aa1.96□□□□□ -2.1
PEP1YBL017C CSG2P35206 410 aa1.96□□□□□ -2.1
PEP1YBL017C MNR2P35724 969 aa1.96□□□□□ -2.1
PEP1YBL017C ALY1P36117 915 aa1.96□□□□□ -2.1
PEP1YBL017C KIC1P38692 1080 aa1.96□□□□□ -2.1
PEP1YBL017C AIM18P38884 321 aa1.96□□□□□ -2.1
PEP1YBL017C LYS9P38999 446 aa1.96□□□□□ -2.1
PEP1YBL017C PCF11P39081 626 aaPredicted RBP1.96□□□□□ -2.1
PEP1YBL017C TPO2P53283 614 aa1.96□□□□□ -2.1
PEP1YBL017C PNG1Q02890 363 aa1.96□□□□□ -2.1
PEP1YBL017C YLR012CQ07927 99 aa1.96□□□□□ -2.1
PEP1YBL017C PKH2Q12236 1081 aaKnown RBP1.96□□□□□ -2.1
PEP1YBL017C PYC1P11154 1178 aaKnown RBP1.96□□□□□ -2.1
PEP1YBL017C KSS1P14681 368 aa1.96□□□□□ -2.1
PEP1YBL017C MSH3P25336 1018 aa1.96□□□□□ -2.1
PEP1YBL017C SSH4P32343 579 aa1.96□□□□□ -2.1
PEP1YBL017C SPT23P35210 1082 aa1.96□□□□□ -2.1
PEP1YBL017C UTH1P36135 365 aa1.96□□□□□ -2.1
PEP1YBL017C SHM1P37292 490 aaPredicted RBP1.96□□□□□ -2.1
PEP1YBL017C ASG1P40467 964 aa1.96□□□□□ -2.1
PEP1YBL017C SNZ3P43545 298 aa1.96□□□□□ -2.1
PEP1YBL017C IML2P47031 731 aa1.96□□□□□ -2.1
PEP1YBL017C AVT1P47082 602 aa1.96□□□□□ -2.1
PEP1YBL017C YMR1P47147 688 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
PEP1YBL017C RSM7P47150 247 aa1.96□□□□□ -2.1
PEP1YBL017C SNZ2P53824 298 aa1.96□□□□□ -2.1
PEP1YBL017C RSM10Q03201 203 aa1.96□□□□□ -2.1
PEP1YBL017C TSR2Q06672 205 aaKnown RBP1.96□□□□□ -2.1
PEP1YBL017C YPQ1Q12010 308 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms