RNA–Protein interactions for RNA: ENSMUST00000105409.7

Col18a1-203, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Col18a1, Length 4,791 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-203ENSMUST00000105409 Tyro3P55144 880 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Snrpa1P57784 255 aaKnown RBP13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Timm10P62073 90 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Nlrp1aQ2LKU9 1182 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Lrrc43Q3V0L5 667 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Sh3d21Q7TSG5 549 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Brd3Q8K2F0 726 aaKnown RBP13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Sde2Q8K1J5 448 aaKnown RBP13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Chd1lQ9CXF7 900 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Mrpl12Q9DB15 201 aaKnown RBP13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Terf1P70371 421 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ncf1Q09014 390 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 RragbQ6NTA4 374 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ift122Q6NWV3 1182 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Cetn1P41209 172 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ift88Q61371 824 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Cfap53Q9D439 514 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Smco2Q9DA21 347 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Gdpd2Q9ESM6 539 aa13.5□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Zbtb45Q52KG4 520 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Naa15Q80UM3 865 aaKnown RBP13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Edc3Q8K2D3 508 aaKnown RBP13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Cdhr2E9Q7P9 1308 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Gadd45bP22339 160 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 IqcgQ80W32 419 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Abcc10Q8R4P9 1501 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Cbx1P83917 185 aaKnown RBP13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Tgfb1i1Q62219 461 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Zkscan8Q8BSL0 588 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Klhl30Q8C3F7 581 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Erlin1Q91X78 346 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 TnksQ6PFX9 1320 aa13.49□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Akap2O54931 893 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Fam170aQ66LM6 333 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Prune1Q8BIW1 454 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Rtn1Q8K0T0 780 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Smc1bQ920F6 1248 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ssfa2Q922B9 1252 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 PigbQ9JJQ0 542 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Syt10Q9R0N4 523 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Trpm1Q2TV84 1622 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 TsksO54887 585 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Atp8a2P98200 1148 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Itga6Q61739 1091 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Hook3Q8BUK6 718 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Vps18Q8R307 973 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 NpcdF8VQB8 469 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ufl1Q8CCJ3 793 aaKnown RBP13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ctage5Q8R311 779 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ccdc12Q8R344 166 aaKnown RBP13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Gm45015A0A140LII9 184 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Gm18336A0A140LIU8 765 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Trim55G3X8Y1 545 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 CebpzP53569 1052 aaKnown RBP13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Pla2g4fQ50L41 855 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Abtb2Q7TQI7 1024 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Olfm5Q8BU90 496 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Cdca7Q9D0M2 382 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Hdac6Q9Z2V5 1149 aa13.48□□□□□ -0.25
Col18a1-203ENSMUST00000105409 TrdnE9Q9K5 693 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ets1P27577 440 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ccdc82Q6PG04 518 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ccdc73Q8CDM4 1066 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Cps1Q8C196 1500 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Glg1Q61543 1175 aaKnown RBP13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Prm3Q62100 101 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Xrcc4Q924T3 326 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Tubb4aQ9D6F9 444 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Ndufa8Q9DCJ5 172 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 1700006A11RikB9EHI3 544 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Sun3Q5SS91 320 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 IghaA0A0A6YXW6 389 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 AdnpQ9Z103 1108 aaKnown RBP13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Cyp2ab1S4R196 498 aa13.47□□□□□ -0.25
Col18a1-203ENSMUST00000105409 MarcksP26645 309 aaKnown RBP13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 IntuQ059U7 942 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Tekt3Q6X6Z7 490 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Miga2Q8BK03 593 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Taf5lQ91WQ5 589 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Haus2Q9CQS9 234 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Zc3h13E9Q784 1729 aaKnown RBP13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Rims2Q9EQZ7 1530 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 EspnlQ3UYR4 1005 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Luc7l2Q7TNC4 392 aaKnown RBP13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Nop53Q8BK35 484 aaKnown RBP13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Rps6kb1Q8BSK8 525 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Slit3Q9WVB4 1523 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Mast3Q3U214 1321 aa13.46□□□□□ -0.25
Col18a1-203ENSMUST00000105409 Pram1Q6BCL1 675 aa13.46□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Tmx3Q8BXZ1 456 aa13.46□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Pard3Q99NH2 1333 aa13.46□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Kifc2O08672 792 aa13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Kcnj4P52189 445 aa13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Trim52Q8CDV4 233 aa13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 SltmQ8CH25 1031 aaKnown RBP13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Abcc4E9Q236 1325 aa13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Zfp853A0A1D5RM95 733 aa13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Dhx38Q80X98 1228 aa13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Cyp2d12Q8BVD2 504 aa13.45□□□□□ -0.26
Col18a1-203ENSMUST00000105409 Irs4Q9Z0Y7 1216 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms