RNA–Protein interactions for RNA: ENSMUST00000105409.7

Col18a1-203, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Col18a1, Length 4,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-203ENSMUST00000105409 Rhox8Q6VSS7 320 aa21.11■□□□□ 0.97
Col18a1-203ENSMUST00000105409 NischQ80TM9 1593 aa20.63■□□□□ 0.89
Col18a1-203ENSMUST00000105409 Abcc9P70170 1546 aa19.63■□□□□ 0.73
Col18a1-203ENSMUST00000105409 Abcc8B2RUS7 1588 aa19.25■□□□□ 0.67
Col18a1-203ENSMUST00000105409 Gm35339A0A140LHH9 1649 aa19.22■□□□□ 0.67
Col18a1-203ENSMUST00000105409 Rpgrip1Q9EPQ2 1331 aa19.12■□□□□ 0.65
Col18a1-203ENSMUST00000105409 Ccdc136Q3TVA9 1136 aa19■□□□□ 0.63
Col18a1-203ENSMUST00000105409 Trim41Q5NCC3 630 aa18.77■□□□□ 0.6
Col18a1-203ENSMUST00000105409 Rtl1Q7M732 1744 aa18.76■□□□□ 0.59
Col18a1-203ENSMUST00000105409 Ehmt2Q9Z148 1263 aaKnown RBP18.72■□□□□ 0.59
Col18a1-203ENSMUST00000105409 Ccdc180J3QNE4 1664 aa18.65■□□□□ 0.58
Col18a1-203ENSMUST00000105409 Esf1Q3V1V3 845 aaKnown RBP18.61■□□□□ 0.57
Col18a1-203ENSMUST00000105409 Cngb1E1AZ71 1325 aa18.55■□□□□ 0.56
Col18a1-203ENSMUST00000105409 Zcchc6Q5BLK4 1491 aaKnown RBP18.34■□□□□ 0.53
Col18a1-203ENSMUST00000105409 Gab3Q8BSM5 595 aa18.31■□□□□ 0.52
Col18a1-203ENSMUST00000105409 HrcG5E8J6 738 aa18.29■□□□□ 0.52
Col18a1-203ENSMUST00000105409 Las1lA2BE28 776 aaKnown RBP18.25■□□□□ 0.51
Col18a1-203ENSMUST00000105409 Wdr66E9Q743 1299 aa18.16■□□□□ 0.5
Col18a1-203ENSMUST00000105409 Npm2Q80W85 207 aa18.15■□□□□ 0.5
Col18a1-203ENSMUST00000105409 Zeb1Q64318 1117 aa18.15■□□□□ 0.5
Col18a1-203ENSMUST00000105409 Rb1cc1Q9ESK9 1588 aa18.09■□□□□ 0.49
Col18a1-203ENSMUST00000105409 Ube2uB1AUC4 352 aa18.05■□□□□ 0.48
Col18a1-203ENSMUST00000105409 Myt1lP97500 1187 aa18■□□□□ 0.47
Col18a1-203ENSMUST00000105409 NacadQ5SWP3 1504 aa17.98■□□□□ 0.47
Col18a1-203ENSMUST00000105409 Dcaf1Q80TR8 1506 aa17.94■□□□□ 0.46
Col18a1-203ENSMUST00000105409 Acin1Q9JIX8 1338 aaKnown RBP17.81■□□□□ 0.44
Col18a1-203ENSMUST00000105409 Baz1aO88379 1555 aa17.8■□□□□ 0.44
Col18a1-203ENSMUST00000105409 Kdm5dQ62240 1548 aa17.74■□□□□ 0.43
Col18a1-203ENSMUST00000105409 NefmP08553 848 aa17.72■□□□□ 0.43
Col18a1-203ENSMUST00000105409 Brd4Q9ESU6 1400 aaKnown RBP17.71■□□□□ 0.43
Col18a1-203ENSMUST00000105409 UbtfP25976 765 aaKnown RBP17.64■□□□□ 0.41
Col18a1-203ENSMUST00000105409 Pelp1Q9DBD5 1123 aaKnown RBP17.63■□□□□ 0.41
Col18a1-203ENSMUST00000105409 Il27Q8K3I6 234 aa17.53■□□□□ 0.4
Col18a1-203ENSMUST00000105409 ScribQ80U72 1612 aa17.5■□□□□ 0.39
Col18a1-203ENSMUST00000105409 Cep164Q5DU05 1446 aa17.43■□□□□ 0.38
Col18a1-203ENSMUST00000105409 Stra8P70278 393 aa17.35■□□□□ 0.37
Col18a1-203ENSMUST00000105409 Crybg2B7ZCC2 1516 aa17.35■□□□□ 0.37
Col18a1-203ENSMUST00000105409 Sycp2Q9CUU3 1500 aa17.32■□□□□ 0.36
Col18a1-203ENSMUST00000105409 Chic1Q8CBW7 227 aa17.29■□□□□ 0.36
Col18a1-203ENSMUST00000105409 CenpbP27790 599 aa17.26■□□□□ 0.35
Col18a1-203ENSMUST00000105409 Golga3P55937 1487 aa17.2■□□□□ 0.34
Col18a1-203ENSMUST00000105409 Npm1Q61937 292 aaKnown RBP17.17■□□□□ 0.34
Col18a1-203ENSMUST00000105409 Slc24a1Q91WD8 1130 aa17.13■□□□□ 0.33
Col18a1-203ENSMUST00000105409 Fam50aQ9WV03 339 aaKnown RBP17.12■□□□□ 0.33
Col18a1-203ENSMUST00000105409 Ap3b1Q9Z1T1 1105 aa17.11■□□□□ 0.33
Col18a1-203ENSMUST00000105409 Cdk11bP24788 784 aaKnown RBP17.1■□□□□ 0.33
Col18a1-203ENSMUST00000105409 Pcgf6Q99NA9 353 aa17.09■□□□□ 0.33
Col18a1-203ENSMUST00000105409 Smarca2Q6DIC0 1577 aa17.08■□□□□ 0.32
Col18a1-203ENSMUST00000105409 Mier1Q5UAK0 511 aa16.99■□□□□ 0.31
Col18a1-203ENSMUST00000105409 NclP09405 707 aaKnown RBP16.98■□□□□ 0.31
Col18a1-203ENSMUST00000105409 Rsf1E9PWW9 1441 aaKnown RBP16.94■□□□□ 0.3
Col18a1-203ENSMUST00000105409 Ubl4bQ9CQ84 188 aa16.93■□□□□ 0.3
Col18a1-203ENSMUST00000105409 Nop58Q6DFW4 536 aaKnown RBP16.93■□□□□ 0.3
Col18a1-203ENSMUST00000105409 Anp32bQ9EST5 272 aaKnown RBP16.93■□□□□ 0.3
Col18a1-203ENSMUST00000105409 Pds5bQ4VA53 1446 aaKnown RBP16.91■□□□□ 0.3
Col18a1-203ENSMUST00000105409 NrdcQ8BHG1 1161 aa16.91■□□□□ 0.3
Col18a1-203ENSMUST00000105409 Neurod1Q60867 357 aa16.91■□□□□ 0.3
Col18a1-203ENSMUST00000105409 TonslQ6NZL6 1363 aa16.9■□□□□ 0.3
Col18a1-203ENSMUST00000105409 Cecr2E9Q2Z1 1453 aa16.89■□□□□ 0.29
Col18a1-203ENSMUST00000105409 Ercc6F8VPZ5 1481 aa16.89■□□□□ 0.29
Col18a1-203ENSMUST00000105409 Clip1Q922J3 1391 aa16.88■□□□□ 0.29
Col18a1-203ENSMUST00000105409 Plekhg3Q4VAC9 1341 aa16.87■□□□□ 0.29
Col18a1-203ENSMUST00000105409 Tnnt3Q9QZ47 272 aa16.87■□□□□ 0.29
Col18a1-203ENSMUST00000105409 CftrP26361 1476 aa16.86■□□□□ 0.29
Col18a1-203ENSMUST00000105409 Kif15Q6P9L6 1387 aa16.82■□□□□ 0.28
Col18a1-203ENSMUST00000105409 Supt5hO55201 1082 aaKnown RBP16.81■□□□□ 0.28
Col18a1-203ENSMUST00000105409 Ppargc1bQ8VHJ7 1014 aa16.77■□□□□ 0.28
Col18a1-203ENSMUST00000105409 Ccdc88bQ4QRL3 1481 aa16.77■□□□□ 0.28
Col18a1-203ENSMUST00000105409 Synj1Q8CHC4 1574 aa16.75■□□□□ 0.27
Col18a1-203ENSMUST00000105409 Fmn1Q05860 1466 aa16.74■□□□□ 0.27
Col18a1-203ENSMUST00000105409 Os9Q8K2C7 672 aa16.74■□□□□ 0.27
Col18a1-203ENSMUST00000105409 Lmod2Q3UHZ5 550 aa16.73■□□□□ 0.27
Col18a1-203ENSMUST00000105409 Smarca4Q3TKT4 1613 aaKnown RBP16.71■□□□□ 0.27
Col18a1-203ENSMUST00000105409 Ccdc18Q640L5 1455 aa16.7■□□□□ 0.26
Col18a1-203ENSMUST00000105409 Atad2bE9Q166 1460 aaKnown RBP16.69■□□□□ 0.26
Col18a1-203ENSMUST00000105409 Amer1Q7TS75 1132 aa16.69■□□□□ 0.26
Col18a1-203ENSMUST00000105409 NeflP08551 543 aa16.67■□□□□ 0.26
Col18a1-203ENSMUST00000105409 Cttnbp2B9EJA2 1648 aa16.64■□□□□ 0.25
Col18a1-203ENSMUST00000105409 Eif5bQ05D44 1216 aaKnown RBP16.63■□□□□ 0.25
Col18a1-203ENSMUST00000105409 Setd5Q5XJV7 1441 aa16.59■□□□□ 0.25
Col18a1-203ENSMUST00000105409 ClspnQ80YR7 1315 aa16.56■□□□□ 0.24
Col18a1-203ENSMUST00000105409 Myt1Q8CFC2 1127 aa16.53■□□□□ 0.24
Col18a1-203ENSMUST00000105409 Eea1Q8BL66 1411 aa16.53■□□□□ 0.24
Col18a1-203ENSMUST00000105409 Cep162Q6ZQ06 1403 aa16.51■□□□□ 0.23
Col18a1-203ENSMUST00000105409 BlmO88700 1416 aa16.5■□□□□ 0.23
Col18a1-203ENSMUST00000105409 Iqgap2Q3UQ44 1575 aa16.49■□□□□ 0.23
Col18a1-203ENSMUST00000105409 Zbtb7cQ8VCZ7 619 aa16.47■□□□□ 0.23
Col18a1-203ENSMUST00000105409 Ccer2J3QPU5 274 aa16.46■□□□□ 0.23
Col18a1-203ENSMUST00000105409 Hnrnpul2Q00PI9 745 aaKnown RBP16.45■□□□□ 0.22
Col18a1-203ENSMUST00000105409 BicraF8VPZ9 1578 aa16.43■□□□□ 0.22
Col18a1-203ENSMUST00000105409 Phldb1Q6PDH0 1371 aaKnown RBP16.42■□□□□ 0.22
Col18a1-203ENSMUST00000105409 Ifnlr1Q8CGK5 535 aa16.41■□□□□ 0.22
Col18a1-203ENSMUST00000105409 Eid3Q3V124 375 aa16.39■□□□□ 0.21
Col18a1-203ENSMUST00000105409 4933416C03RikQ3V063 378 aa16.37■□□□□ 0.21
Col18a1-203ENSMUST00000105409 Ttbk1Q6PCN3 1308 aa16.36■□□□□ 0.21
Col18a1-203ENSMUST00000105409 Cux2P70298 1426 aa16.33■□□□□ 0.21
Col18a1-203ENSMUST00000105409 Rapgef2Q8CHG7 1496 aa16.31■□□□□ 0.2
Col18a1-203ENSMUST00000105409 Rtl5Q5DTT4 599 aa16.29■□□□□ 0.2
Col18a1-203ENSMUST00000105409 Sall2Q9QX96 1004 aa16.29■□□□□ 0.2
Col18a1-203ENSMUST00000105409 Hdac5Q9Z2V6 1113 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 1136.4 ms