RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Gm28919A0A087WP35 240 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Mmp8O70138 465 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Stmn4P63042 189 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 LdhaP06151 332 aaKnown RBP17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Tagap1P0CAX8 505 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Fgfr1opQ66JX5 399 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Lmod1Q8BVA4 595 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 AU019823E9PUQ3 292 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Rasal2E9PW37 1286 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 TsksO54887 585 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Rnf216P58283 853 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Abtb2Q7TQI7 1024 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ptcd1Q8C2E4 695 aaKnown RBP17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Rbm19Q8R3C6 952 aaKnown RBP17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 RestQ8VIG1 1082 aa17.85■□□□□ 0.45
Clcn3-203ENSMUST00000093490 TnksQ6PFX9 1320 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Kif5bQ61768 963 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 AceP09470 1312 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 AlkP97793 1621 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Gtpbp6Q3U6U5 514 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Pla2g4fQ50L41 855 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ankrd40Q5SUE8 363 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 4921504E06RikQ8CET2 560 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Kdm4cQ8VCD7 1054 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Gm44503E9PYU5 387 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ube3aO08759 870 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Eif6O55135 245 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Trim28Q62318 834 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Egfl6Q9JJZ5 550 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Nf2P46662 596 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Opa1P58281 960 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Top1Q04750 767 aaKnown RBP17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Gas2l2Q5SSG4 860 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Zfp397Q7TNK4 527 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Asic4Q7TNS7 539 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Tti2Q8BGV4 512 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Yeats4Q9CR11 227 aaKnown RBP17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Lman1Q9D0F3 517 aa17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Uso1Q9Z1Z0 959 aaKnown RBP17.84■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Ppfibp2O35711 882 aa17.83■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Map7d1A2AJI0 846 aa17.83■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Zfp42P22227 288 aa17.83■□□□□ 0.45
Clcn3-203ENSMUST00000093490 MarcksP26645 309 aaKnown RBP17.83■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Fermt2Q8CIB5 680 aa17.83■□□□□ 0.45
Clcn3-203ENSMUST00000093490 Myom2Q14BI5 1463 aa17.83■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Msl1Q6PDM1 616 aa17.83■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Atp6v1aP50516 617 aaKnown RBP17.83■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Kiaa1211Q5PR69 1207 aa17.83■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Tubb2aQ7TMM9 445 aa17.83■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Tubb2bQ9CWF2 445 aa17.83■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ak2Q9WTP6 239 aa17.83■□□□□ 0.44
Clcn3-203ENSMUST00000093490 CltaO08585 235 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Fam107bQ3TGF2 131 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Gramd4Q8CB44 633 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Dpp7Q9ET22 506 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 HmcesQ8R1M0 353 aaKnown RBP17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Dbndd1Q9CZ00 160 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 AmfrQ9R049 643 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Rims1Q99NE5 1463 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Usp19Q3UJD6 1360 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Zhx1P70121 873 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Tmtc2Q56A06 836 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ifit2Q64112 472 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Pcdhb22Q91XZ8 794 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Bst2Q8R2Q8 172 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Tnnc1P19123 161 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Vps37cQ8R105 352 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Irx4Q9QY61 515 aa17.82■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Scaf11E9PZM7 1456 aaKnown RBP17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Fam186bD3Z420 943 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Zbtb21E9Q444 1094 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 AcrbpQ3V140 540 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Snx25Q3ZT31 840 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Krt15Q61414 452 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Pram1Q6BCL1 675 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ano6Q6P9J9 911 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ift122Q6NWV3 1182 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Tmx4Q8C0L0 335 aa17.81■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Serpinc1P32261 465 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ppp2r5bQ6PD28 497 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Fam177a1Q8BR63 207 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Exoc1Q8R3S6 894 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Prpf40aQ9R1C7 953 aaKnown RBP17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Gm10378F6XQQ1 160 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Gzf1Q4VBD9 706 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Stoml1Q8CI66 399 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Zkscan16A2ALW2 728 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ms4a1P19437 291 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Eif4a1P60843 406 aaKnown RBP17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Specc1Q5SXY1 1067 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ctnna2Q61301 953 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Tom1l2Q5SRX1 507 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Stxbp3Q60770 592 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Zfp251Q6PCX8 632 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Ncaph2Q8BSP2 607 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Mx2Q9WVP9 655 aa17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Clasp1Q80TV8 1535 aaKnown RBP17.8■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Zfyve16Q80U44 1528 aa17.79■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Mx1P09922 631 aa17.79■□□□□ 0.44
Clcn3-203ENSMUST00000093490 Slc39a6Q8C145 765 aa17.79■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms